RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 IGHV6-1A0A0B4J1U7 121 aa11.44□□□□□ -0.58
VRK2-207ENST00000440705 TNXBP22105 4242 aa11.43□□□□□ -0.58
VRK2-207ENST00000440705 ATOX1O00244 68 aa11.41□□□□□ -0.58
VRK2-207ENST00000440705 C8orf17Q9NRJ1 99 aa11.4□□□□□ -0.59
VRK2-207ENST00000440705 MMP24-AS1A0A0U1RRL7 71 aa11.39□□□□□ -0.59
VRK2-207ENST00000440705 KRTAP29-1A8MX34 341 aaPredicted RBP11.39□□□□□ -0.59
VRK2-207ENST00000440705 CASC2Q6XLA1 102 aa11.38□□□□□ -0.59
VRK2-207ENST00000440705 WFDC13Q8IUB5 93 aa11.38□□□□□ -0.59
VRK2-207ENST00000440705 C8orf87E5RJ46 101 aa11.36□□□□□ -0.59
VRK2-207ENST00000440705 hDV103S1A0JD37 113 aa11.36□□□□□ -0.59
VRK2-207ENST00000440705 ANAPC13Q9BS18 74 aa11.35□□□□□ -0.59
VRK2-207ENST00000440705 MYCBP2O75592 4640 aa11.35□□□□□ -0.59
VRK2-207ENST00000440705 HERC2O95714 4834 aa11.34□□□□□ -0.59
VRK2-207ENST00000440705 LINC00313P59037 77 aa11.33□□□□□ -0.6
VRK2-207ENST00000440705 NOTCH2NLQ7Z3S9 236 aa11.33□□□□□ -0.6
VRK2-207ENST00000440705 SMIM20Q8N5G0 67 aa11.33□□□□□ -0.6
VRK2-207ENST00000440705 RETNLBQ9BQ08 111 aa11.32□□□□□ -0.6
VRK2-207ENST00000440705 DMBT1Q9UGM3 2413 aaPredicted RBP11.3□□□□□ -0.6
VRK2-207ENST00000440705 PCP4P48539 62 aa11.28□□□□□ -0.6
VRK2-207ENST00000440705 TMEM254Q8TBM7 123 aa11.28□□□□□ -0.6
VRK2-207ENST00000440705 SERP2Q8N6R1 65 aa11.26□□□□□ -0.61
VRK2-207ENST00000440705 MRPL34Q9BQ48 92 aaKnown RBP11.26□□□□□ -0.61
VRK2-207ENST00000440705 TRAV7A0A075B6U4 112 aa11.25□□□□□ -0.61
VRK2-207ENST00000440705 FP248Q71RG6 208 aaPredicted RBP11.25□□□□□ -0.61
VRK2-207ENST00000440705 OCR1Q9BZK8 76 aa11.25□□□□□ -0.61
VRK2-207ENST00000440705 J3QL48 77 aa11.22□□□□□ -0.61
VRK2-207ENST00000440705 ABCA13Q86UQ4 5058 aa11.21□□□□□ -0.62
VRK2-207ENST00000440705 COX7CP15954 63 aa11.19□□□□□ -0.62
VRK2-207ENST00000440705 KRTAP16-1A8MUX0 517 aa11.17□□□□□ -0.62
VRK2-207ENST00000440705 NDUFS5O43920 106 aa11.17□□□□□ -0.62
VRK2-207ENST00000440705 TP53AIP1Q9HCN2 124 aa11.17□□□□□ -0.62
VRK2-207ENST00000440705 UQCRQO14949 82 aa11.15□□□□□ -0.62
VRK2-207ENST00000440705 IGLV7-46A0A075B6I9 117 aa11.14□□□□□ -0.63
VRK2-207ENST00000440705 Q8N9P0 234 aaPredicted RBP11.14□□□□□ -0.63
VRK2-207ENST00000440705 C9orf92A6NGG3 77 aa11.14□□□□□ -0.63
VRK2-207ENST00000440705 C5orf47Q569G3 176 aa11.11□□□□□ -0.63
VRK2-207ENST00000440705 PRR4Q16378 134 aa11.1□□□□□ -0.63
VRK2-207ENST00000440705 CCDC179H3BU77 68 aa11.07□□□□□ -0.64
VRK2-207ENST00000440705 TRAV22A0A0B4J277 110 aa11.04□□□□□ -0.64
VRK2-207ENST00000440705 MP68P56378 58 aa11.03□□□□□ -0.64
VRK2-207ENST00000440705 KRTAP13-3Q3SY46 172 aa11.03□□□□□ -0.64
VRK2-207ENST00000440705 C20orf197Q8N268 126 aa11.03□□□□□ -0.64
VRK2-207ENST00000440705 C20orf166-AS1Q96NR2 134 aa11.02□□□□□ -0.64
VRK2-207ENST00000440705 H0Y9P7 68 aa11.01□□□□□ -0.65
VRK2-207ENST00000440705 A8MUU9 505 aa11□□□□□ -0.65
VRK2-207ENST00000440705 H3BPC8 53 aa10.98□□□□□ -0.65
VRK2-207ENST00000440705 KLKP1Q107X0 134 aa10.97□□□□□ -0.65
VRK2-207ENST00000440705 TPRXLQ17RH7 258 aa10.97□□□□□ -0.65
VRK2-207ENST00000440705 Q5W150 140 aa10.97□□□□□ -0.65
VRK2-207ENST00000440705 A0A0U1RQV1 116 aa10.96□□□□□ -0.65
VRK2-207ENST00000440705 Q75L30 129 aa10.96□□□□□ -0.65
VRK2-207ENST00000440705 LINC00208Q96KT6 92 aa10.95□□□□□ -0.66
VRK2-207ENST00000440705 SNURFQ9Y675 71 aa10.95□□□□□ -0.66
VRK2-207ENST00000440705 XP32Q5T750 250 aa10.92□□□□□ -0.66
VRK2-207ENST00000440705 C1orf64Q8NEQ6 169 aa10.92□□□□□ -0.66
VRK2-207ENST00000440705 ZCCHC13Q8WW36 166 aaKnown RBP10.92□□□□□ -0.66
VRK2-207ENST00000440705 PCLOQ9Y6V0 5065 aa10.9□□□□□ -0.66
VRK2-207ENST00000440705 NDUFC1O43677 76 aa10.86□□□□□ -0.67
VRK2-207ENST00000440705 CYSTM1Q9H1C7 97 aa10.86□□□□□ -0.67
VRK2-207ENST00000440705 LOC101927531A0A1B0GV80 90 aa10.85□□□□□ -0.67
VRK2-207ENST00000440705 RPL37P61927 97 aaKnown RBP10.85□□□□□ -0.67
VRK2-207ENST00000440705 ATP11AUNQ6ZP68 121 aa10.82□□□□□ -0.68
VRK2-207ENST00000440705 H7BZZ5 65 aa10.79□□□□□ -0.68
VRK2-207ENST00000440705 IGKV2-30P06310 120 aa10.78□□□□□ -0.68
VRK2-207ENST00000440705 CYP4F30PQ9H0H9 118 aa10.77□□□□□ -0.69
VRK2-207ENST00000440705 IGKV2D-30A0A075B6S6 120 aa10.73□□□□□ -0.69
VRK2-207ENST00000440705 C7orf65Q6ZTY9 151 aa10.72□□□□□ -0.69
VRK2-207ENST00000440705 TMEM258P61165 79 aa10.7□□□□□ -0.7
VRK2-207ENST00000440705 PCOTHQ58A44 107 aa10.7□□□□□ -0.7
VRK2-207ENST00000440705 LPAP08519 4548 aa10.67□□□□□ -0.7
VRK2-207ENST00000440705 SPINK7P58062 85 aa10.65□□□□□ -0.7
VRK2-207ENST00000440705 SPANXA2-OT1Q8N9U9 137 aa10.63□□□□□ -0.71
VRK2-207ENST00000440705 SEC61BP60468 96 aaKnown RBP10.61□□□□□ -0.71
VRK2-207ENST00000440705 FAM236DA0A1B0GTK5 79 aa10.6□□□□□ -0.71
VRK2-207ENST00000440705 FAM236CP0DP71 79 aa10.6□□□□□ -0.71
VRK2-207ENST00000440705 ATP5EP56381 51 aaPredicted RBP10.6□□□□□ -0.71
VRK2-207ENST00000440705 LRP2P98164 4655 aa10.6□□□□□ -0.71
VRK2-207ENST00000440705 HERC1Q15751 4861 aa10.59□□□□□ -0.71
VRK2-207ENST00000440705 HRES1P13985 223 aa10.59□□□□□ -0.71
VRK2-207ENST00000440705 HMCN2Q8NDA2 5059 aa10.47□□□□□ -0.73
VRK2-207ENST00000440705 C4orf26Q17RF5 130 aa10.46□□□□□ -0.74
VRK2-207ENST00000440705 DMAC1Q96GE9 116 aa10.41□□□□□ -0.74
VRK2-207ENST00000440705 ACYP2P14621 99 aa10.38□□□□□ -0.75
VRK2-207ENST00000440705 A8MUN3 132 aa10.37□□□□□ -0.75
VRK2-207ENST00000440705 LCE2DQ5TA82 110 aaPredicted RBP10.37□□□□□ -0.75
VRK2-207ENST00000440705 SERP1Q9Y6X1 66 aa10.37□□□□□ -0.75
VRK2-207ENST00000440705 COX6B2Q6YFQ2 88 aa10.36□□□□□ -0.75
VRK2-207ENST00000440705 MUC17Q685J3 4493 aa10.33□□□□□ -0.76
VRK2-207ENST00000440705 RPS28P62857 69 aaKnown RBP10.32□□□□□ -0.76
VRK2-207ENST00000440705 KRTAP4-1Q9BYQ7 146 aa10.3□□□□□ -0.76
VRK2-207ENST00000440705 KRTAP3-1Q9BYR8 98 aa10.3□□□□□ -0.76
VRK2-207ENST00000440705 MPLKIPQ8TAP9 179 aa10.29□□□□□ -0.76
VRK2-207ENST00000440705 RBM12B-AS1Q9P1G2 102 aa10.29□□□□□ -0.76
VRK2-207ENST00000440705 COA5Q86WW8 74 aa10.28□□□□□ -0.76
VRK2-207ENST00000440705 CHKB-CPT1BH3BT56 60 aa10.2□□□□□ -0.78
VRK2-207ENST00000440705 H1FX-AS1Q4G0G2 97 aa10.15□□□□□ -0.79
VRK2-207ENST00000440705 SMIM26A0A096LP01 95 aa10.09□□□□□ -0.79
VRK2-207ENST00000440705 SPTSSBQ8NFR3 76 aa10.05□□□□□ -0.8
VRK2-207ENST00000440705 S4R3F8 94 aa10.05□□□□□ -0.8
VRK2-207ENST00000440705 KRTAP19-2Q3LHN2 52 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms