RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 LIMD2Q9BT23 127 aa6.07□□□□□ -1.44
CPNE1-218ENST00000439806 PCOTHQ58A44 107 aa6.05□□□□□ -1.44
CPNE1-218ENST00000439806 C4orf48Q5BLP8 95 aa6.05□□□□□ -1.44
CPNE1-218ENST00000439806 KRTAP1-4P0C5Y4 121 aa6.04□□□□□ -1.44
CPNE1-218ENST00000439806 MPLKIPQ8TAP9 179 aa6.04□□□□□ -1.44
CPNE1-218ENST00000439806 TYMSOSQ8TAI1 123 aa6.03□□□□□ -1.44
CPNE1-218ENST00000439806 HECTD4Q9Y4D8 3996 aa6.02□□□□□ -1.45
CPNE1-218ENST00000439806 PLA2G1BP04054 148 aaKnown RBP6.02□□□□□ -1.45
CPNE1-218ENST00000439806 LINC00313P59037 77 aa6.02□□□□□ -1.45
CPNE1-218ENST00000439806 C1orf195Q5TG92 126 aa6.02□□□□□ -1.45
CPNE1-218ENST00000439806 FBN3Q75N90 2809 aa6.02□□□□□ -1.45
CPNE1-218ENST00000439806 KMT2AQ03164 3969 aa6.01□□□□□ -1.45
CPNE1-218ENST00000439806 Q1T7F1 81 aa6.01□□□□□ -1.45
CPNE1-218ENST00000439806 SRRM2Q9UQ35 2752 aaKnown RBP6.01□□□□□ -1.45
CPNE1-218ENST00000439806 DNAH8Q96JB1 4490 aa6□□□□□ -1.45
CPNE1-218ENST00000439806 IGLV7-46A0A075B6I9 117 aa6□□□□□ -1.45
CPNE1-218ENST00000439806 LOC101927531A0A1B0GV80 90 aa6□□□□□ -1.45
CPNE1-218ENST00000439806 V9GYY9 64 aa5.99□□□□□ -1.45
CPNE1-218ENST00000439806 DNHD1Q96M86 4753 aa5.97□□□□□ -1.45
CPNE1-218ENST00000439806 SPINK1P00995 79 aa5.97□□□□□ -1.45
CPNE1-218ENST00000439806 A0A1B0GVY2 172 aa5.96□□□□□ -1.46
CPNE1-218ENST00000439806 FAM229AH3BQW9 127 aa5.96□□□□□ -1.46
CPNE1-218ENST00000439806 Q5W150 140 aa5.96□□□□□ -1.46
CPNE1-218ENST00000439806 TGP01266 2768 aa5.96□□□□□ -1.46
CPNE1-218ENST00000439806 SMR3BP02814 79 aaPredicted RBP5.95□□□□□ -1.46
CPNE1-218ENST00000439806 COA5Q86WW8 74 aa5.95□□□□□ -1.46
CPNE1-218ENST00000439806 LINC00304Q8N9R0 145 aa5.95□□□□□ -1.46
CPNE1-218ENST00000439806 FRAS1Q86XX4 4008 aa5.95□□□□□ -1.46
CPNE1-218ENST00000439806 KRTAP13-3Q3SY46 172 aa5.94□□□□□ -1.46
CPNE1-218ENST00000439806 SPAG11AQ6PDA7 123 aa5.94□□□□□ -1.46
CPNE1-218ENST00000439806 PRR26Q8N8Z3 221 aa5.94□□□□□ -1.46
CPNE1-218ENST00000439806 Q8N9P0 234 aaPredicted RBP5.94□□□□□ -1.46
CPNE1-218ENST00000439806 BRK1Q8WUW1 75 aa5.94□□□□□ -1.46
CPNE1-218ENST00000439806 DNAH11Q96DT5 4516 aa5.93□□□□□ -1.46
CPNE1-218ENST00000439806 RETNLBQ9BQ08 111 aa5.93□□□□□ -1.46
CPNE1-218ENST00000439806 KRTAP16-1A8MUX0 517 aa5.92□□□□□ -1.46
CPNE1-218ENST00000439806 RPS29P62273 56 aaKnown RBP5.92□□□□□ -1.46
CPNE1-218ENST00000439806 DNAH5Q8TE73 4624 aa5.92□□□□□ -1.46
CPNE1-218ENST00000439806 IGKV2-30P06310 120 aa5.88□□□□□ -1.47
CPNE1-218ENST00000439806 PKD1P98161 4303 aa5.88□□□□□ -1.47
CPNE1-218ENST00000439806 PSPHP1O15172 72 aa5.87□□□□□ -1.47
CPNE1-218ENST00000439806 HYDINQ4G0P3 5121 aa5.87□□□□□ -1.47
CPNE1-218ENST00000439806 HRES1P13985 223 aa5.86□□□□□ -1.47
CPNE1-218ENST00000439806 A8MUN3 132 aa5.84□□□□□ -1.47
CPNE1-218ENST00000439806 ACYP2P14621 99 aa5.84□□□□□ -1.47
CPNE1-218ENST00000439806 KRTAP10-4P60372 401 aaPredicted RBP5.84□□□□□ -1.47
CPNE1-218ENST00000439806 PRR15LQ9BU68 103 aa5.83□□□□□ -1.48
CPNE1-218ENST00000439806 FAT2Q9NYQ8 4349 aa5.83□□□□□ -1.48
CPNE1-218ENST00000439806 IGKV2D-30A0A075B6S6 120 aa5.82□□□□□ -1.48
CPNE1-218ENST00000439806 PMAIP1Q13794 54 aa5.82□□□□□ -1.48
CPNE1-218ENST00000439806 DMAC1Q96GE9 116 aa5.81□□□□□ -1.48
CPNE1-218ENST00000439806 CHKB-CPT1BH3BT56 60 aa5.8□□□□□ -1.48
CPNE1-218ENST00000439806 SEC61GP60059 68 aa5.8□□□□□ -1.48
CPNE1-218ENST00000439806 Q5VV11 94 aa5.8□□□□□ -1.48
CPNE1-218ENST00000439806 LINC01558Q9Y6Z2 57 aa5.79□□□□□ -1.48
CPNE1-218ENST00000439806 LRP1BQ9NZR2 4599 aa5.76□□□□□ -1.49
CPNE1-218ENST00000439806 C9orf92A6NGG3 77 aa5.76□□□□□ -1.49
CPNE1-218ENST00000439806 C7orf65Q6ZTY9 151 aa5.76□□□□□ -1.49
CPNE1-218ENST00000439806 SACSQ9NZJ4 4579 aa5.76□□□□□ -1.49
CPNE1-218ENST00000439806 Q75L30 129 aa5.75□□□□□ -1.49
CPNE1-218ENST00000439806 ATP11AUNQ6ZP68 121 aa5.73□□□□□ -1.49
CPNE1-218ENST00000439806 A8MUU9 505 aa5.72□□□□□ -1.49
CPNE1-218ENST00000439806 Q5VSD8 79 aa5.72□□□□□ -1.49
CPNE1-218ENST00000439806 C20orf166-AS1Q96NR2 134 aa5.72□□□□□ -1.49
CPNE1-218ENST00000439806 A6NED7 52 aa5.71□□□□□ -1.5
CPNE1-218ENST00000439806 DYNC1H1Q14204 4646 aaKnown RBP5.69□□□□□ -1.5
CPNE1-218ENST00000439806 VPS13BQ7Z7G8 4022 aa5.68□□□□□ -1.5
CPNE1-218ENST00000439806 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
CPNE1-218ENST00000439806 Q8N1X5 172 aa5.66□□□□□ -1.5
CPNE1-218ENST00000439806 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
CPNE1-218ENST00000439806 KRTAP10-8P60410 259 aa5.65□□□□□ -1.5
CPNE1-218ENST00000439806 A0A1B0GU69 56 aa5.63□□□□□ -1.51
CPNE1-218ENST00000439806 PKHD1L1Q86WI1 4243 aa5.62□□□□□ -1.51
CPNE1-218ENST00000439806 RYR2Q92736 4967 aa5.62□□□□□ -1.51
CPNE1-218ENST00000439806 APOBP04114 4563 aaKnown RBP5.61□□□□□ -1.51
CPNE1-218ENST00000439806 SPINK7P58062 85 aa5.61□□□□□ -1.51
CPNE1-218ENST00000439806 LCA10Q71F78 164 aa5.61□□□□□ -1.51
CPNE1-218ENST00000439806 A6NN06 94 aa5.6□□□□□ -1.51
CPNE1-218ENST00000439806 A8MU10 97 aa5.6□□□□□ -1.51
CPNE1-218ENST00000439806 SPTSSBQ8NFR3 76 aa5.6□□□□□ -1.51
CPNE1-218ENST00000439806 LCE2DQ5TA82 110 aaPredicted RBP5.58□□□□□ -1.52
CPNE1-218ENST00000439806 PKHD1P08F94 4074 aa5.58□□□□□ -1.52
CPNE1-218ENST00000439806 FLG2Q5D862 2391 aaPredicted RBP5.57□□□□□ -1.52
CPNE1-218ENST00000439806 RPL37P61927 97 aaKnown RBP5.53□□□□□ -1.52
CPNE1-218ENST00000439806 COX6B2Q6YFQ2 88 aa5.52□□□□□ -1.53
CPNE1-218ENST00000439806 UQCR11O14957 56 aa5.5□□□□□ -1.53
CPNE1-218ENST00000439806 KRTAP17-1Q9BYP8 105 aa5.5□□□□□ -1.53
CPNE1-218ENST00000439806 RBM12B-AS1Q9P1G2 102 aa5.5□□□□□ -1.53
CPNE1-218ENST00000439806 XP32Q5T750 250 aa5.49□□□□□ -1.53
CPNE1-218ENST00000439806 KRTAP3-1Q9BYR8 98 aa5.49□□□□□ -1.53
CPNE1-218ENST00000439806 FAT1Q14517 4588 aa5.48□□□□□ -1.53
CPNE1-218ENST00000439806 MT1HL1P0DM35 61 aa5.48□□□□□ -1.53
CPNE1-218ENST00000439806 MIR22HGQ0VDD5 57 aa5.48□□□□□ -1.53
CPNE1-218ENST00000439806 SPATA8Q6RVD6 105 aa5.47□□□□□ -1.53
CPNE1-218ENST00000439806 HSPG2P98160 4391 aa5.39□□□□□ -1.55
CPNE1-218ENST00000439806 TPRXLQ17RH7 258 aa5.37□□□□□ -1.55
CPNE1-218ENST00000439806 KMT2CQ8NEZ4 4911 aaKnown RBP5.37□□□□□ -1.55
CPNE1-218ENST00000439806 RYR1P21817 5038 aa5.37□□□□□ -1.55
CPNE1-218ENST00000439806 FAT3Q8TDW7 4589 aa5.35□□□□□ -1.55
CPNE1-218ENST00000439806 TNXBP22105 4242 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 453.7 ms