RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 A0A1B0GW54 56 aa5.98□□□□□ -1.45
CDC42SE1-202ENST00000439374 CDC42SE1Q9NRR8 79 aa5.98□□□□□ -1.45
CDC42SE1-202ENST00000439374 LINC00313P59037 77 aa5.97□□□□□ -1.45
CDC42SE1-202ENST00000439374 Q75L30 129 aa5.97□□□□□ -1.45
CDC42SE1-202ENST00000439374 IGLV7-46A0A075B6I9 117 aa5.97□□□□□ -1.45
CDC42SE1-202ENST00000439374 PRKDCP78527 4128 aaKnown RBP5.96□□□□□ -1.45
CDC42SE1-202ENST00000439374 Q5W150 140 aa5.96□□□□□ -1.45
CDC42SE1-202ENST00000439374 C7orf65Q6ZTY9 151 aa5.96□□□□□ -1.45
CDC42SE1-202ENST00000439374 SPANXA2-OT1Q8N9U9 137 aa5.96□□□□□ -1.45
CDC42SE1-202ENST00000439374 DNAH9Q9NYC9 4486 aa5.96□□□□□ -1.46
CDC42SE1-202ENST00000439374 SPACA4Q8TDM5 124 aa5.95□□□□□ -1.46
CDC42SE1-202ENST00000439374 PLECQ15149 4684 aaKnown RBP5.95□□□□□ -1.46
CDC42SE1-202ENST00000439374 MRPL34Q9BQ48 92 aaKnown RBP5.95□□□□□ -1.46
CDC42SE1-202ENST00000439374 Q6ZRN7 208 aaPredicted RBP5.95□□□□□ -1.46
CDC42SE1-202ENST00000439374 A6NN06 94 aa5.94□□□□□ -1.46
CDC42SE1-202ENST00000439374 A0A1B0GU69 56 aa5.94□□□□□ -1.46
CDC42SE1-202ENST00000439374 A0A1B0GVX0 72 aa5.94□□□□□ -1.46
CDC42SE1-202ENST00000439374 ZNF861PO60384 105 aa5.93□□□□□ -1.46
CDC42SE1-202ENST00000439374 ZNF706Q9Y5V0 76 aaPredicted RBP5.93□□□□□ -1.46
CDC42SE1-202ENST00000439374 DNAH7Q8WXX0 4024 aa5.91□□□□□ -1.46
CDC42SE1-202ENST00000439374 H3BPC8 53 aa5.91□□□□□ -1.46
CDC42SE1-202ENST00000439374 CRIPTQ9P021 101 aa5.91□□□□□ -1.46
CDC42SE1-202ENST00000439374 KRTAP10-2P60368 255 aa5.9□□□□□ -1.46
CDC42SE1-202ENST00000439374 LINC01558Q9Y6Z2 57 aa5.89□□□□□ -1.47
CDC42SE1-202ENST00000439374 TP53AIP1Q9HCN2 124 aa5.88□□□□□ -1.47
CDC42SE1-202ENST00000439374 DNAH3Q8TD57 4116 aa5.87□□□□□ -1.47
CDC42SE1-202ENST00000439374 SPRR1BP22528 89 aa5.87□□□□□ -1.47
CDC42SE1-202ENST00000439374 WWC2-AS2Q96NR7 200 aa5.87□□□□□ -1.47
CDC42SE1-202ENST00000439374 IGLV7-43P04211 117 aa5.87□□□□□ -1.47
CDC42SE1-202ENST00000439374 Q8N1X5 172 aa5.87□□□□□ -1.47
CDC42SE1-202ENST00000439374 Q96NJ1 140 aa5.86□□□□□ -1.47
CDC42SE1-202ENST00000439374 C8orf87E5RJ46 101 aa5.86□□□□□ -1.47
CDC42SE1-202ENST00000439374 SMR3BP02814 79 aaPredicted RBP5.86□□□□□ -1.47
CDC42SE1-202ENST00000439374 ACYP2P14621 99 aa5.85□□□□□ -1.47
CDC42SE1-202ENST00000439374 C4orf48Q5BLP8 95 aa5.84□□□□□ -1.47
CDC42SE1-202ENST00000439374 CSAG1Q6PB30 78 aa5.84□□□□□ -1.47
CDC42SE1-202ENST00000439374 KRTAP13-1Q8IUC0 172 aa5.84□□□□□ -1.47
CDC42SE1-202ENST00000439374 STARD9Q9P2P6 4700 aa5.84□□□□□ -1.48
CDC42SE1-202ENST00000439374 H3BS24 57 aa5.83□□□□□ -1.48
CDC42SE1-202ENST00000439374 MIR22HGQ0VDD5 57 aa5.82□□□□□ -1.48
CDC42SE1-202ENST00000439374 PLAC8Q9NZF1 115 aa5.82□□□□□ -1.48
CDC42SE1-202ENST00000439374 KMT2AQ03164 3969 aa5.82□□□□□ -1.48
CDC42SE1-202ENST00000439374 Q6ZR54 194 aa5.82□□□□□ -1.48
CDC42SE1-202ENST00000439374 DNAH1Q9P2D7 4330 aa5.8□□□□□ -1.48
CDC42SE1-202ENST00000439374 KRTAP10-1P60331 282 aa5.8□□□□□ -1.48
CDC42SE1-202ENST00000439374 PLA2G1BP04054 148 aaKnown RBP5.79□□□□□ -1.48
CDC42SE1-202ENST00000439374 LINC01554Q52M75 96 aa5.77□□□□□ -1.49
CDC42SE1-202ENST00000439374 FRAS1Q86XX4 4008 aa5.76□□□□□ -1.49
CDC42SE1-202ENST00000439374 UQCR11O14957 56 aa5.75□□□□□ -1.49
CDC42SE1-202ENST00000439374 LINC00483Q53H64 154 aa5.74□□□□□ -1.49
CDC42SE1-202ENST00000439374 TYMSOSQ8TAI1 123 aa5.74□□□□□ -1.49
CDC42SE1-202ENST00000439374 DNAH11Q96DT5 4516 aa5.74□□□□□ -1.49
CDC42SE1-202ENST00000439374 C9orf92A6NGG3 77 aa5.71□□□□□ -1.5
CDC42SE1-202ENST00000439374 SSBP3-AS1Q7Z2R9 100 aa5.71□□□□□ -1.5
CDC42SE1-202ENST00000439374 VPS13DQ5THJ4 4388 aa5.69□□□□□ -1.5
CDC42SE1-202ENST00000439374 KRTAP13-2Q52LG2 175 aa5.69□□□□□ -1.5
CDC42SE1-202ENST00000439374 FAM229AH3BQW9 127 aa5.68□□□□□ -1.5
CDC42SE1-202ENST00000439374 DNAH8Q96JB1 4490 aa5.67□□□□□ -1.5
CDC42SE1-202ENST00000439374 DNAH2Q9P225 4427 aa5.66□□□□□ -1.5
CDC42SE1-202ENST00000439374 DNAH17Q9UFH2 4485 aa5.66□□□□□ -1.5
CDC42SE1-202ENST00000439374 DNAH6Q9C0G6 4158 aa5.65□□□□□ -1.51
CDC42SE1-202ENST00000439374 DMAC1Q96GE9 116 aa5.65□□□□□ -1.51
CDC42SE1-202ENST00000439374 SPATA8Q6RVD6 105 aa5.64□□□□□ -1.51
CDC42SE1-202ENST00000439374 ASB16-AS1Q495Z4 193 aa5.63□□□□□ -1.51
CDC42SE1-202ENST00000439374 HYDINQ4G0P3 5121 aa5.62□□□□□ -1.51
CDC42SE1-202ENST00000439374 LRP1BQ9NZR2 4599 aa5.62□□□□□ -1.51
CDC42SE1-202ENST00000439374 A0A0D9SG42 100 aa5.61□□□□□ -1.51
CDC42SE1-202ENST00000439374 LINC00304Q8N9R0 145 aa5.6□□□□□ -1.51
CDC42SE1-202ENST00000439374 HECTD4Q9Y4D8 3996 aa5.57□□□□□ -1.52
CDC42SE1-202ENST00000439374 KRTAP13-3Q3SY46 172 aa5.55□□□□□ -1.52
CDC42SE1-202ENST00000439374 KRTAP1-4P0C5Y4 121 aa5.54□□□□□ -1.52
CDC42SE1-202ENST00000439374 FAT1Q14517 4588 aa5.53□□□□□ -1.52
CDC42SE1-202ENST00000439374 DYNC2H1Q8NCM8 4307 aaKnown RBP5.51□□□□□ -1.53
CDC42SE1-202ENST00000439374 PKHD1P08F94 4074 aa5.5□□□□□ -1.53
CDC42SE1-202ENST00000439374 Q6ZSA8 131 aa5.5□□□□□ -1.53
CDC42SE1-202ENST00000439374 DNAH5Q8TE73 4624 aa5.5□□□□□ -1.53
CDC42SE1-202ENST00000439374 A0A1B0GU33 70 aa5.5□□□□□ -1.53
CDC42SE1-202ENST00000439374 SPINT4Q6UDR6 99 aa5.49□□□□□ -1.53
CDC42SE1-202ENST00000439374 H0YAA0 97 aa5.49□□□□□ -1.53
CDC42SE1-202ENST00000439374 VPS13BQ7Z7G8 4022 aa5.46□□□□□ -1.54
CDC42SE1-202ENST00000439374 KMT2CQ8NEZ4 4911 aaKnown RBP5.46□□□□□ -1.54
CDC42SE1-202ENST00000439374 K7ERS5 55 aa5.45□□□□□ -1.54
CDC42SE1-202ENST00000439374 KRTAP16-1A8MUX0 517 aa5.43□□□□□ -1.54
CDC42SE1-202ENST00000439374 C10orf95Q9H7T3 257 aa5.43□□□□□ -1.54
CDC42SE1-202ENST00000439374 A8MUU9 505 aa5.42□□□□□ -1.54
CDC42SE1-202ENST00000439374 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
CDC42SE1-202ENST00000439374 ALMS1Q8TCU4 4167 aa5.4□□□□□ -1.55
CDC42SE1-202ENST00000439374 SACSQ9NZJ4 4579 aa5.39□□□□□ -1.55
CDC42SE1-202ENST00000439374 ROMO1P60602 79 aa5.39□□□□□ -1.55
CDC42SE1-202ENST00000439374 FAT2Q9NYQ8 4349 aa5.37□□□□□ -1.55
CDC42SE1-202ENST00000439374 DYNC1H1Q14204 4646 aaKnown RBP5.37□□□□□ -1.55
CDC42SE1-202ENST00000439374 H1FX-AS1Q4G0G2 97 aa5.36□□□□□ -1.55
CDC42SE1-202ENST00000439374 MYCBP2O75592 4640 aa5.36□□□□□ -1.55
CDC42SE1-202ENST00000439374 KRTAP21-3Q3LHN1 58 aa5.33□□□□□ -1.56
CDC42SE1-202ENST00000439374 COX6B2Q6YFQ2 88 aa5.32□□□□□ -1.56
CDC42SE1-202ENST00000439374 Q5VSD8 79 aa5.31□□□□□ -1.56
CDC42SE1-202ENST00000439374 NDUFAF8A1L188 74 aa5.3□□□□□ -1.56
CDC42SE1-202ENST00000439374 PKD1P98161 4303 aa5.3□□□□□ -1.56
CDC42SE1-202ENST00000439374 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
CDC42SE1-202ENST00000439374 LRP1Q07954 4544 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms