RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 SPINK1P00995 79 aa9.58□□□□□ -0.88
DHFR-201ENST00000439211 NUPR2A6NF83 97 aa9.56□□□□□ -0.88
DHFR-201ENST00000439211 RTL8CO15255 209 aa9.56□□□□□ -0.88
DHFR-201ENST00000439211 PANO1I0J062 215 aa9.55□□□□□ -0.88
DHFR-201ENST00000439211 A0A1B0GVX0 72 aa9.55□□□□□ -0.88
DHFR-201ENST00000439211 SPATA8Q6RVD6 105 aa9.55□□□□□ -0.88
DHFR-201ENST00000439211 CSMD3Q7Z407 3707 aa9.54□□□□□ -0.88
DHFR-201ENST00000439211 CIRBP-AS1Q8TBR5 109 aa9.53□□□□□ -0.88
DHFR-201ENST00000439211 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.53□□□□□ -0.88
DHFR-201ENST00000439211 LY6G6CO95867 125 aa9.47□□□□□ -0.89
DHFR-201ENST00000439211 IGLV5-52A0A0A0MRZ9 124 aa9.47□□□□□ -0.89
DHFR-201ENST00000439211 COL7A1Q02388 2944 aa9.46□□□□□ -0.89
DHFR-201ENST00000439211 SPRR1BP22528 89 aa9.46□□□□□ -0.9
DHFR-201ENST00000439211 PSORS1C2Q9UIG4 136 aa9.46□□□□□ -0.9
DHFR-201ENST00000439211 A0A087WTM6 91 aa9.43□□□□□ -0.9
DHFR-201ENST00000439211 DMBT1Q9UGM3 2413 aaPredicted RBP9.42□□□□□ -0.9
DHFR-201ENST00000439211 IGKV2D-30A0A075B6S6 120 aa9.42□□□□□ -0.9
DHFR-201ENST00000439211 IGKV2-30P06310 120 aa9.42□□□□□ -0.9
DHFR-201ENST00000439211 ROMO1P60602 79 aa9.42□□□□□ -0.9
DHFR-201ENST00000439211 CRIPTQ9P021 101 aa9.41□□□□□ -0.9
DHFR-201ENST00000439211 SSBP3-AS1Q7Z2R9 100 aa9.4□□□□□ -0.9
DHFR-201ENST00000439211 SPACA4Q8TDM5 124 aa9.38□□□□□ -0.91
DHFR-201ENST00000439211 K7ERS5 55 aa9.38□□□□□ -0.91
DHFR-201ENST00000439211 A0A087X002 238 aa9.38□□□□□ -0.91
DHFR-201ENST00000439211 NOTCH2NLQ7Z3S9 236 aa9.38□□□□□ -0.91
DHFR-201ENST00000439211 ZNF861PO60384 105 aa9.37□□□□□ -0.91
DHFR-201ENST00000439211 TGP01266 2768 aa9.37□□□□□ -0.91
DHFR-201ENST00000439211 Q5W150 140 aa9.37□□□□□ -0.91
DHFR-201ENST00000439211 SPINT4Q6UDR6 99 aa9.37□□□□□ -0.91
DHFR-201ENST00000439211 ANK2Q01484 3957 aa9.34□□□□□ -0.91
DHFR-201ENST00000439211 DMAC1Q96GE9 116 aa9.34□□□□□ -0.91
DHFR-201ENST00000439211 KRTAP25-1Q3LHN0 102 aa9.32□□□□□ -0.92
DHFR-201ENST00000439211 WWC2-AS2Q96NR7 200 aa9.3□□□□□ -0.92
DHFR-201ENST00000439211 FAM229AH3BQW9 127 aa9.29□□□□□ -0.92
DHFR-201ENST00000439211 Q6ZRN7 208 aaPredicted RBP9.28□□□□□ -0.92
DHFR-201ENST00000439211 KRTAP13-1Q8IUC0 172 aa9.27□□□□□ -0.93
DHFR-201ENST00000439211 Q96NJ1 140 aa9.26□□□□□ -0.93
DHFR-201ENST00000439211 IGLV7-43P04211 117 aa9.24□□□□□ -0.93
DHFR-201ENST00000439211 DNAH10Q8IVF4 4471 aa9.22□□□□□ -0.93
DHFR-201ENST00000439211 HUWE1Q7Z6Z7 4374 aaKnown RBP9.2□□□□□ -0.94
DHFR-201ENST00000439211 LINC00483Q53H64 154 aa9.2□□□□□ -0.94
DHFR-201ENST00000439211 A8MUU9 505 aa9.16□□□□□ -0.94
DHFR-201ENST00000439211 Q8N1X5 172 aa9.15□□□□□ -0.94
DHFR-201ENST00000439211 FBN3Q75N90 2809 aa9.12□□□□□ -0.95
DHFR-201ENST00000439211 A0A0A0MQY5 61 aa9.09□□□□□ -0.95
DHFR-201ENST00000439211 LINC00304Q8N9R0 145 aa9.09□□□□□ -0.95
DHFR-201ENST00000439211 A0A1B0GU33 70 aa9.08□□□□□ -0.96
DHFR-201ENST00000439211 NDUFAF8A1L188 74 aa9.08□□□□□ -0.96
DHFR-201ENST00000439211 LYSTQ99698 3801 aa9.07□□□□□ -0.96
DHFR-201ENST00000439211 MEGF8Q7Z7M0 2845 aa9.05□□□□□ -0.96
DHFR-201ENST00000439211 KRTAP10-2P60368 255 aa9.05□□□□□ -0.96
DHFR-201ENST00000439211 TYMSOSQ8TAI1 123 aa9.01□□□□□ -0.97
DHFR-201ENST00000439211 KRTAP16-1A8MUX0 517 aa8.99□□□□□ -0.97
DHFR-201ENST00000439211 P0C880 135 aa8.99□□□□□ -0.97
DHFR-201ENST00000439211 DNAH9Q9NYC9 4486 aa8.98□□□□□ -0.97
DHFR-201ENST00000439211 KRTAP13-3Q3SY46 172 aa8.95□□□□□ -0.98
DHFR-201ENST00000439211 CMYA5Q8N3K9 4069 aa8.94□□□□□ -0.98
DHFR-201ENST00000439211 H0YAA0 97 aa8.94□□□□□ -0.98
DHFR-201ENST00000439211 Q6ZSA8 131 aa8.94□□□□□ -0.98
DHFR-201ENST00000439211 KRTAP10-1P60331 282 aa8.93□□□□□ -0.98
DHFR-201ENST00000439211 PLECQ15149 4684 aaKnown RBP8.93□□□□□ -0.98
DHFR-201ENST00000439211 KRTAP13-2Q52LG2 175 aa8.9□□□□□ -0.99
DHFR-201ENST00000439211 SMR3BP02814 79 aaPredicted RBP8.89□□□□□ -0.99
DHFR-201ENST00000439211 C20orf166-AS1Q96NR2 134 aa8.88□□□□□ -0.99
DHFR-201ENST00000439211 A0A0D9SG42 100 aa8.86□□□□□ -0.99
DHFR-201ENST00000439211 H1FX-AS1Q4G0G2 97 aa8.86□□□□□ -0.99
DHFR-201ENST00000439211 C9orf92A6NGG3 77 aa8.85□□□□□ -0.99
DHFR-201ENST00000439211 DNAH1Q9P2D7 4330 aa8.85□□□□□ -0.99
DHFR-201ENST00000439211 DNAH3Q8TD57 4116 aa8.82□□□□□ -1
DHFR-201ENST00000439211 DNAH7Q8WXX0 4024 aa8.8□□□□□ -1
DHFR-201ENST00000439211 STARD9Q9P2P6 4700 aa8.73□□□□□ -1.01
DHFR-201ENST00000439211 C10orf95Q9H7T3 257 aa8.71□□□□□ -1.02
DHFR-201ENST00000439211 LUZP6Q538Z0 58 aa8.7□□□□□ -1.02
DHFR-201ENST00000439211 RPL37P61927 97 aaKnown RBP8.69□□□□□ -1.02
DHFR-201ENST00000439211 KRTAP1-4P0C5Y4 121 aa8.68□□□□□ -1.02
DHFR-201ENST00000439211 FRAS1Q86XX4 4008 aa8.67□□□□□ -1.02
DHFR-201ENST00000439211 KMT2AQ03164 3969 aa8.66□□□□□ -1.02
DHFR-201ENST00000439211 DNAH8Q96JB1 4490 aa8.65□□□□□ -1.03
DHFR-201ENST00000439211 COX6B2Q6YFQ2 88 aa8.63□□□□□ -1.03
DHFR-201ENST00000439211 PRKDCP78527 4128 aaKnown RBP8.62□□□□□ -1.03
DHFR-201ENST00000439211 VPS13DQ5THJ4 4388 aa8.59□□□□□ -1.03
DHFR-201ENST00000439211 ALMS1Q8TCU4 4167 aa8.59□□□□□ -1.03
DHFR-201ENST00000439211 DNAH11Q96DT5 4516 aa8.59□□□□□ -1.03
DHFR-201ENST00000439211 TPRXLQ17RH7 258 aa8.55□□□□□ -1.04
DHFR-201ENST00000439211 DNAH17Q9UFH2 4485 aa8.55□□□□□ -1.04
DHFR-201ENST00000439211 DNHD1Q96M86 4753 aa8.5□□□□□ -1.05
DHFR-201ENST00000439211 DNAH2Q9P225 4427 aa8.48□□□□□ -1.05
DHFR-201ENST00000439211 HECTD4Q9Y4D8 3996 aa8.47□□□□□ -1.05
DHFR-201ENST00000439211 LRP1BQ9NZR2 4599 aa8.45□□□□□ -1.06
DHFR-201ENST00000439211 DNAH6Q9C0G6 4158 aa8.44□□□□□ -1.06
DHFR-201ENST00000439211 KRTAP15-1Q3LI76 137 aa8.43□□□□□ -1.06
DHFR-201ENST00000439211 DYNC2H1Q8NCM8 4307 aaKnown RBP8.41□□□□□ -1.06
DHFR-201ENST00000439211 RPS29P62273 56 aaKnown RBP8.35□□□□□ -1.07
DHFR-201ENST00000439211 DNAH5Q8TE73 4624 aa8.29□□□□□ -1.08
DHFR-201ENST00000439211 S4R3F8 94 aa8.28□□□□□ -1.08
DHFR-201ENST00000439211 KRTAP3-1Q9BYR8 98 aa8.24□□□□□ -1.09
DHFR-201ENST00000439211 VPS13BQ7Z7G8 4022 aa8.24□□□□□ -1.09
DHFR-201ENST00000439211 KRTAP21-3Q3LHN1 58 aa8.22□□□□□ -1.09
DHFR-201ENST00000439211 Q5VSD8 79 aa8.2□□□□□ -1.1
DHFR-201ENST00000439211 FAT1Q14517 4588 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms