RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 MYO9AB2RTY4 2548 aa1.35□□□□□ -2.19
HMGB1P45-201ENST00000435986 APCP25054 2843 aa1.34□□□□□ -2.19
HMGB1P45-201ENST00000435986 PRRC2CQ9Y520 2896 aaKnown RBP1.34□□□□□ -2.19
HMGB1P45-201ENST00000435986 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.34□□□□□ -2.19
HMGB1P45-201ENST00000435986 NIPBLQ6KC79 2804 aaeCLIP1.34□□□□□ -2.19
HMGB1P45-201ENST00000435986 Q5VSD8 79 aa1.34□□□□□ -2.19
HMGB1P45-201ENST00000435986 TMEM167BQ9NRX6 74 aa1.34□□□□□ -2.19
HMGB1P45-201ENST00000435986 SETD2Q9BYW2 2564 aaPredicted RBP1.34□□□□□ -2.2
HMGB1P45-201ENST00000435986 DOPEY1Q5JWR5 2465 aa1.33□□□□□ -2.2
HMGB1P45-201ENST00000435986 SPRR1AP35321 89 aa1.33□□□□□ -2.2
HMGB1P45-201ENST00000435986 KRTAP10-4P60372 401 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P45-201ENST00000435986 APLNQ9ULZ1 77 aa1.33□□□□□ -2.2
HMGB1P45-201ENST00000435986 BSNQ9UPA5 3926 aa1.33□□□□□ -2.2
HMGB1P45-201ENST00000435986 APC2O95996 2303 aa1.33□□□□□ -2.2
HMGB1P45-201ENST00000435986 PTPRQQ9UMZ3 2332 aa1.33□□□□□ -2.2
HMGB1P45-201ENST00000435986 USP9YO00507 2555 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P45-201ENST00000435986 MAP1AP78559 2803 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P45-201ENST00000435986 ACACAQ13085 2346 aa1.32□□□□□ -2.2
HMGB1P45-201ENST00000435986 LYNX1G3V0Z9 82 aa1.32□□□□□ -2.2
HMGB1P45-201ENST00000435986 SPINK4O60575 86 aa1.32□□□□□ -2.2
HMGB1P45-201ENST00000435986 POLQO75417 2590 aa1.32□□□□□ -2.2
HMGB1P45-201ENST00000435986 ABCA12Q86UK0 2595 aa1.31□□□□□ -2.2
HMGB1P45-201ENST00000435986 HIVEP1P15822 2718 aa1.31□□□□□ -2.2
HMGB1P45-201ENST00000435986 HRNRQ86YZ3 2850 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P45-201ENST00000435986 LRRK2Q5S007 2527 aa1.3□□□□□ -2.2
HMGB1P45-201ENST00000435986 H0YAA0 97 aa1.3□□□□□ -2.2
HMGB1P45-201ENST00000435986 H1FX-AS1Q4G0G2 97 aa1.3□□□□□ -2.2
HMGB1P45-201ENST00000435986 LELP1Q5T871 98 aa1.3□□□□□ -2.2
HMGB1P45-201ENST00000435986 MINOS1Q5TGZ0 78 aa1.3□□□□□ -2.2
HMGB1P45-201ENST00000435986 DEFB105AQ8NG35 78 aa1.3□□□□□ -2.2
HMGB1P45-201ENST00000435986 LINC00308Q8TCZ7 52 aa1.3□□□□□ -2.2
HMGB1P45-201ENST00000435986 NBEAL1Q6ZS30 2694 aa1.29□□□□□ -2.2
HMGB1P45-201ENST00000435986 CUBNO60494 3623 aa1.29□□□□□ -2.2
HMGB1P45-201ENST00000435986 VPS13CQ709C8 3753 aa1.29□□□□□ -2.2
HMGB1P45-201ENST00000435986 SPRR1BP22528 89 aa1.29□□□□□ -2.2
HMGB1P45-201ENST00000435986 WFDC13Q8IUB5 93 aa1.29□□□□□ -2.2
HMGB1P45-201ENST00000435986 C2CD3Q4AC94 2353 aa1.29□□□□□ -2.2
HMGB1P45-201ENST00000435986 SPTAN1Q13813 2472 aaKnown RBP1.29□□□□□ -2.2
HMGB1P45-201ENST00000435986 TLN1Q9Y490 2541 aaKnown RBP1.28□□□□□ -2.2
HMGB1P45-201ENST00000435986 ZNF469Q96JG9 3925 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P45-201ENST00000435986 DNHD1Q96M86 4753 aa1.28□□□□□ -2.2
HMGB1P45-201ENST00000435986 SPTA1P02549 2419 aa1.28□□□□□ -2.2
HMGB1P45-201ENST00000435986 MXRA5Q9NR99 2828 aa1.28□□□□□ -2.2
HMGB1P45-201ENST00000435986 TGP01266 2768 aa1.27□□□□□ -2.21
HMGB1P45-201ENST00000435986 CREBBPQ92793 2442 aa1.27□□□□□ -2.21
HMGB1P45-201ENST00000435986 KNL1Q8NG31 2342 aa1.27□□□□□ -2.21
HMGB1P45-201ENST00000435986 PLCE1Q9P212 2302 aa1.27□□□□□ -2.21
HMGB1P45-201ENST00000435986 HIVEP3Q5T1R4 2406 aa1.27□□□□□ -2.21
HMGB1P45-201ENST00000435986 F8P00451 2351 aa1.27□□□□□ -2.21
HMGB1P45-201ENST00000435986 MEGF8Q7Z7M0 2845 aa1.26□□□□□ -2.21
HMGB1P45-201ENST00000435986 SPTBN1Q01082 2364 aaKnown RBP1.26□□□□□ -2.21
HMGB1P45-201ENST00000435986 PRB3Q04118 309 aaPredicted RBP1.26□□□□□ -2.21
HMGB1P45-201ENST00000435986 C6orf48Q9UBA6 75 aa1.26□□□□□ -2.21
HMGB1P45-201ENST00000435986 U3KQA8 63 aa1.26□□□□□ -2.21
HMGB1P45-201ENST00000435986 AKAP9Q99996 3911 aa1.26□□□□□ -2.21
HMGB1P45-201ENST00000435986 SPG11Q96JI7 2443 aa1.26□□□□□ -2.21
HMGB1P45-201ENST00000435986 NSD1Q96L73 2696 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P45-201ENST00000435986 NBASA2RRP1 2371 aa1.25□□□□□ -2.21
HMGB1P45-201ENST00000435986 ZANQ9Y493 2812 aa1.25□□□□□ -2.21
HMGB1P45-201ENST00000435986 IAPPP10997 89 aa1.25□□□□□ -2.21
HMGB1P45-201ENST00000435986 FLNAP21333 2647 aaKnown RBP1.25□□□□□ -2.21
HMGB1P45-201ENST00000435986 ANKHD1Q8IWZ3 2542 aaKnown RBP1.25□□□□□ -2.21
HMGB1P45-201ENST00000435986 PKD1L1Q8TDX9 2849 aa1.25□□□□□ -2.21
HMGB1P45-201ENST00000435986 SVEP1Q4LDE5 3571 aa1.24□□□□□ -2.21
HMGB1P45-201ENST00000435986 TENM1Q9UKZ4 2725 aa1.24□□□□□ -2.21
HMGB1P45-201ENST00000435986 USF3Q68DE3 2245 aa1.24□□□□□ -2.21
HMGB1P45-201ENST00000435986 KLK9Q2XQG4 91 aa1.23□□□□□ -2.21
HMGB1P45-201ENST00000435986 DEFB133Q30KQ1 61 aa1.23□□□□□ -2.21
HMGB1P45-201ENST00000435986 DEFB109BQ30KR1 87 aa1.23□□□□□ -2.21
HMGB1P45-201ENST00000435986 SMR3AQ99954 134 aa1.23□□□□□ -2.21
HMGB1P45-201ENST00000435986 FCGBPQ9Y6R7 5405 aaPredicted RBP1.23□□□□□ -2.21
HMGB1P45-201ENST00000435986 PCNX1Q96RV3 2341 aa1.23□□□□□ -2.21
HMGB1P45-201ENST00000435986 MTORP42345 2549 aa1.23□□□□□ -2.21
HMGB1P45-201ENST00000435986 ATRQ13535 2644 aa1.22□□□□□ -2.21
HMGB1P45-201ENST00000435986 DEFB130BP0DP73 79 aa1.22□□□□□ -2.21
HMGB1P45-201ENST00000435986 DEFB130AP0DP74 79 aa1.22□□□□□ -2.21
HMGB1P45-201ENST00000435986 COL6A5A8TX70 2615 aa1.22□□□□□ -2.21
HMGB1P45-201ENST00000435986 ACANP16112 2415 aa1.21□□□□□ -2.22
HMGB1P45-201ENST00000435986 ABCA2Q9BZC7 2435 aa1.21□□□□□ -2.22
HMGB1P45-201ENST00000435986 SMIM2Q9BVW6 85 aa1.21□□□□□ -2.22
HMGB1P45-201ENST00000435986 NBEAL2Q6ZNJ1 2754 aa1.21□□□□□ -2.22
HMGB1P45-201ENST00000435986 STAB1Q9NY15 2570 aa1.21□□□□□ -2.22
HMGB1P45-201ENST00000435986 CCDC168Q8NDH2 2452 aa1.21□□□□□ -2.22
HMGB1P45-201ENST00000435986 TFF3Q07654 80 aa1.2□□□□□ -2.22
HMGB1P45-201ENST00000435986 PKDREJQ9NTG1 2253 aa1.2□□□□□ -2.22
HMGB1P45-201ENST00000435986 COL7A1Q02388 2944 aa1.19□□□□□ -2.22
HMGB1P45-201ENST00000435986 VWFP04275 2813 aa1.19□□□□□ -2.22
HMGB1P45-201ENST00000435986 RPS27P42677 84 aaKnown RBP1.19□□□□□ -2.22
HMGB1P45-201ENST00000435986 SNRPGP62308 76 aaKnown RBP1.19□□□□□ -2.22
HMGB1P45-201ENST00000435986 RPS27LQ71UM5 84 aaKnown RBP1.19□□□□□ -2.22
HMGB1P45-201ENST00000435986 RYR3Q15413 4870 aa1.19□□□□□ -2.22
HMGB1P45-201ENST00000435986 WNK2Q9Y3S1 2297 aa1.18□□□□□ -2.22
HMGB1P45-201ENST00000435986 CSMD3Q7Z407 3707 aa1.17□□□□□ -2.22
HMGB1P45-201ENST00000435986 MGAM2Q2M2H8 2515 aa1.17□□□□□ -2.22
HMGB1P45-201ENST00000435986 KMT2CQ8NEZ4 4911 aaKnown RBP1.16□□□□□ -2.22
HMGB1P45-201ENST00000435986 NDUFA1O15239 70 aa1.16□□□□□ -2.22
HMGB1P45-201ENST00000435986 CSPG4Q6UVK1 2322 aa1.16□□□□□ -2.22
HMGB1P45-201ENST00000435986 AKAP6Q13023 2319 aa1.15□□□□□ -2.23
HMGB1P45-201ENST00000435986 SONP18583 2426 aaKnown RBP1.15□□□□□ -2.23
HMGB1P45-201ENST00000435986 TLN2Q9Y4G6 2542 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 186.7 ms