RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 DNAH7Q8WXX0 4024 aa-0.27□□□□□ -2.45
PTPN4-205ENST00000433888 ZC3H13Q5T200 1668 aaKnown RBP-0.27□□□□□ -2.45
PTPN4-205ENST00000433888 ITPR3Q14573 2671 aa-0.27□□□□□ -2.45
PTPN4-205ENST00000433888 DUOX2Q9NRD8 1548 aa-0.27□□□□□ -2.45
PTPN4-205ENST00000433888 SONP18583 2426 aaKnown RBP-0.27□□□□□ -2.45
PTPN4-205ENST00000433888 PLECQ15149 4684 aaKnown RBP-0.27□□□□□ -2.45
PTPN4-205ENST00000433888 S4R3F8 94 aa-0.27□□□□□ -2.45
PTPN4-205ENST00000433888 DNAH8Q96JB1 4490 aa-0.27□□□□□ -2.45
PTPN4-205ENST00000433888 RNF17Q9BXT8 1623 aaKnown RBP-0.27□□□□□ -2.45
PTPN4-205ENST00000433888 ASXL1Q8IXJ9 1541 aa-0.28□□□□□ -2.45
PTPN4-205ENST00000433888 KIAA1109Q2LD37 5005 aa-0.28□□□□□ -2.45
PTPN4-205ENST00000433888 RYR2Q92736 4967 aa-0.28□□□□□ -2.45
PTPN4-205ENST00000433888 CREBBPQ92793 2442 aa-0.28□□□□□ -2.45
PTPN4-205ENST00000433888 SFTA3P0C7M3 94 aa-0.28□□□□□ -2.45
PTPN4-205ENST00000433888 SPRR2EP22531 72 aa-0.28□□□□□ -2.45
PTPN4-205ENST00000433888 MINOS1Q5TGZ0 78 aa-0.28□□□□□ -2.45
PTPN4-205ENST00000433888 ANKRD11Q6UB99 2663 aaPredicted RBP-0.28□□□□□ -2.45
PTPN4-205ENST00000433888 MADDQ8WXG6 1647 aa-0.28□□□□□ -2.45
PTPN4-205ENST00000433888 DNAH1Q9P2D7 4330 aa-0.29□□□□□ -2.46
PTPN4-205ENST00000433888 NCBP2-AS2Q69YL0 99 aa-0.29□□□□□ -2.46
PTPN4-205ENST00000433888 DNAH17Q9UFH2 4485 aa-0.29□□□□□ -2.46
PTPN4-205ENST00000433888 EPG5Q9HCE0 2579 aa-0.29□□□□□ -2.46
PTPN4-205ENST00000433888 USP9YO00507 2555 aaPredicted RBP-0.3□□□□□ -2.46
PTPN4-205ENST00000433888 DNHD1Q96M86 4753 aa-0.3□□□□□ -2.46
PTPN4-205ENST00000433888 LINC01549A6NIU2 74 aa-0.3□□□□□ -2.46
PTPN4-205ENST00000433888 KRTAP19-8Q3LI54 63 aa-0.3□□□□□ -2.46
PTPN4-205ENST00000433888 KIAA0586Q9BVV6 1533 aa-0.3□□□□□ -2.46
PTPN4-205ENST00000433888 RNF213Q63HN8 5207 aa-0.3□□□□□ -2.46
PTPN4-205ENST00000433888 NBEAQ8NFP9 2946 aa-0.31□□□□□ -2.46
PTPN4-205ENST00000433888 FCER1GP30273 86 aa-0.31□□□□□ -2.46
PTPN4-205ENST00000433888 RPS27P42677 84 aaKnown RBP-0.31□□□□□ -2.46
PTPN4-205ENST00000433888 RPS27LQ71UM5 84 aaKnown RBP-0.31□□□□□ -2.46
PTPN4-205ENST00000433888 WDR87Q6ZQQ6 2873 aa-0.31□□□□□ -2.46
PTPN4-205ENST00000433888 DNAH5Q8TE73 4624 aa-0.31□□□□□ -2.46
PTPN4-205ENST00000433888 CMYA5Q8N3K9 4069 aa-0.32□□□□□ -2.46
PTPN4-205ENST00000433888 FASNP49327 2511 aaKnown RBP-0.32□□□□□ -2.46
PTPN4-205ENST00000433888 NHSQ6T4R5 1651 aa-0.32□□□□□ -2.46
PTPN4-205ENST00000433888 WT1-ASQ06250 92 aa-0.32□□□□□ -2.46
PTPN4-205ENST00000433888 TEX15Q9BXT5 2789 aa-0.32□□□□□ -2.46
PTPN4-205ENST00000433888 DNAH10Q8IVF4 4471 aa-0.32□□□□□ -2.46
PTPN4-205ENST00000433888 LAMA1P25391 3075 aa-0.32□□□□□ -2.46
PTPN4-205ENST00000433888 SPG11Q96JI7 2443 aa-0.33□□□□□ -2.46
PTPN4-205ENST00000433888 ABCC6O95255 1503 aa-0.33□□□□□ -2.46
PTPN4-205ENST00000433888 ITSN2Q9NZM3 1697 aa-0.33□□□□□ -2.46
PTPN4-205ENST00000433888 C9orf92A6NGG3 77 aa-0.33□□□□□ -2.46
PTPN4-205ENST00000433888 LAMA2P24043 3122 aaKnown RBP-0.33□□□□□ -2.46
PTPN4-205ENST00000433888 UTP20O75691 2785 aaKnown RBP-0.34□□□□□ -2.46
PTPN4-205ENST00000433888 SPENQ96T58 3664 aaKnown RBP-0.34□□□□□ -2.46
PTPN4-205ENST00000433888 C6orf48Q9UBA6 75 aa-0.34□□□□□ -2.46
PTPN4-205ENST00000433888 KIF1AQ12756 1690 aa-0.34□□□□□ -2.46
PTPN4-205ENST00000433888 NBEAL2Q6ZNJ1 2754 aa-0.34□□□□□ -2.46
PTPN4-205ENST00000433888 CEP290O15078 2479 aa-0.35□□□□□ -2.46
PTPN4-205ENST00000433888 DNMBPQ6XZF7 1577 aa-0.35□□□□□ -2.47
PTPN4-205ENST00000433888 K7EMI3 77 aa-0.35□□□□□ -2.47
PTPN4-205ENST00000433888 DEFB110Q30KQ9 67 aa-0.35□□□□□ -2.47
PTPN4-205ENST00000433888 A0A0C4DFX4 3053 aa-0.35□□□□□ -2.47
PTPN4-205ENST00000433888 TRIOO75962 3097 aa-0.35□□□□□ -2.47
PTPN4-205ENST00000433888 TEP1Q99973 2627 aaKnown RBP-0.36□□□□□ -2.47
PTPN4-205ENST00000433888 MT1AP04731 61 aa-0.36□□□□□ -2.47
PTPN4-205ENST00000433888 SPRR2FQ96RM1 72 aa-0.36□□□□□ -2.47
PTPN4-205ENST00000433888 INO80Q9ULG1 1556 aaPredicted RBP-0.36□□□□□ -2.47
PTPN4-205ENST00000433888 C3P01024 1663 aa-0.37□□□□□ -2.47
PTPN4-205ENST00000433888 PKD1L2Q7Z442 2459 aa-0.37□□□□□ -2.47
PTPN4-205ENST00000433888 MYO18BQ8IUG5 2567 aa-0.37□□□□□ -2.47
PTPN4-205ENST00000433888 TOGARAM1Q9Y4F4 1720 aa-0.37□□□□□ -2.47
PTPN4-205ENST00000433888 M0R1W7 72 aa-0.37□□□□□ -2.47
PTPN4-205ENST00000433888 THOC2Q8NI27 1593 aaKnown RBP-0.37□□□□□ -2.47
PTPN4-205ENST00000433888 COL12A1Q99715 3063 aa-0.37□□□□□ -2.47
PTPN4-205ENST00000433888 MROH1Q8NDA8 1641 aa-0.38□□□□□ -2.47
PTPN4-205ENST00000433888 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.38□□□□□ -2.47
PTPN4-205ENST00000433888 LRRK2Q5S007 2527 aa-0.38□□□□□ -2.47
PTPN4-205ENST00000433888 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.38□□□□□ -2.47
PTPN4-205ENST00000433888 KRTAP20-2Q3LI61 65 aa-0.38□□□□□ -2.47
PTPN4-205ENST00000433888 LAMA3Q16787 3333 aa-0.38□□□□□ -2.47
PTPN4-205ENST00000433888 MTORP42345 2549 aa-0.39□□□□□ -2.47
PTPN4-205ENST00000433888 NIPBLQ6KC79 2804 aaeCLIP-0.4□□□□□ -2.47
PTPN4-205ENST00000433888 DEFB114Q30KQ6 69 aa-0.4□□□□□ -2.47
PTPN4-205ENST00000433888 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.4□□□□□ -2.47
PTPN4-205ENST00000433888 RANBP2P49792 3224 aaKnown RBP-0.41□□□□□ -2.47
PTPN4-205ENST00000433888 RELNP78509 3460 aa-0.41□□□□□ -2.48
PTPN4-205ENST00000433888 ABCA6Q8N139 1617 aa-0.42□□□□□ -2.48
PTPN4-205ENST00000433888 EFCAB5A4FU69 1503 aa-0.42□□□□□ -2.48
PTPN4-205ENST00000433888 MT4P47944 62 aa-0.42□□□□□ -2.48
PTPN4-205ENST00000433888 FRYQ5TBA9 3013 aa-0.42□□□□□ -2.48
PTPN4-205ENST00000433888 CCDC168Q8NDH2 2452 aa-0.43□□□□□ -2.48
PTPN4-205ENST00000433888 LY75O60449 1722 aa-0.43□□□□□ -2.48
PTPN4-205ENST00000433888 GLI2P10070 1586 aa-0.43□□□□□ -2.48
PTPN4-205ENST00000433888 IGLV5-48A0A075B6I7 105 aa-0.43□□□□□ -2.48
PTPN4-205ENST00000433888 S100ZQ8WXG8 99 aa-0.43□□□□□ -2.48
PTPN4-205ENST00000433888 CCDC180Q9P1Z9 1646 aa-0.43□□□□□ -2.48
PTPN4-205ENST00000433888 CROCC2H7BZ55 1655 aa-0.43□□□□□ -2.48
PTPN4-205ENST00000433888 ABCA13Q86UQ4 5058 aa-0.44□□□□□ -2.48
PTPN4-205ENST00000433888 CDC42BPAQ5VT25 1732 aa-0.44□□□□□ -2.48
PTPN4-205ENST00000433888 C5orf42Q9H799 3197 aa-0.45□□□□□ -2.48
PTPN4-205ENST00000433888 SPTBN5Q9NRC6 3674 aaKnown RBP-0.45□□□□□ -2.48
PTPN4-205ENST00000433888 USP9XQ93008 2570 aaPredicted RBP-0.46□□□□□ -2.48
PTPN4-205ENST00000433888 A0A087WWC5 75 aa-0.46□□□□□ -2.48
PTPN4-205ENST00000433888 H3BUA1 57 aa-0.46□□□□□ -2.48
PTPN4-205ENST00000433888 EEA1Q15075 1411 aa-0.47□□□□□ -2.48
PTPN4-205ENST00000433888 CEP295Q9C0D2 2601 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms