RNA–Protein interactions for RNA: ENST00000431329.5

GAPVD1-208, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-208ENST00000431329 KRTAP29-1A8MX34 341 aaPredicted RBP4.2□□□□□ -1.74
GAPVD1-208ENST00000431329 CASC2Q6XLA1 102 aa4.2□□□□□ -1.74
GAPVD1-208ENST00000431329 PLAC8Q9NZF1 115 aa4.2□□□□□ -1.74
GAPVD1-208ENST00000431329 PKHD1P08F94 4074 aa4.19□□□□□ -1.74
GAPVD1-208ENST00000431329 LRP1BQ9NZR2 4599 aa4.19□□□□□ -1.74
GAPVD1-208ENST00000431329 C1orf64Q8NEQ6 169 aa4.19□□□□□ -1.74
GAPVD1-208ENST00000431329 LINC00208Q96KT6 92 aa4.19□□□□□ -1.74
GAPVD1-208ENST00000431329 A8MWP4 228 aa4.19□□□□□ -1.74
GAPVD1-208ENST00000431329 hDV103S1A0JD37 113 aa4.18□□□□□ -1.74
GAPVD1-208ENST00000431329 SEC61BP60468 96 aaKnown RBP4.18□□□□□ -1.74
GAPVD1-208ENST00000431329 CIRBP-AS1Q8TBR5 109 aa4.18□□□□□ -1.74
GAPVD1-208ENST00000431329 WWC2-AS2Q96NR7 200 aa4.18□□□□□ -1.74
GAPVD1-208ENST00000431329 IGHV6-1A0A0B4J1U7 121 aa4.17□□□□□ -1.74
GAPVD1-208ENST00000431329 H0Y9P7 68 aa4.17□□□□□ -1.74
GAPVD1-208ENST00000431329 ZNF861PO60384 105 aa4.17□□□□□ -1.74
GAPVD1-208ENST00000431329 VPS13BQ7Z7G8 4022 aa4.17□□□□□ -1.74
GAPVD1-208ENST00000431329 SACSQ9NZJ4 4579 aa4.16□□□□□ -1.74
GAPVD1-208ENST00000431329 PSPHP1O15172 72 aa4.16□□□□□ -1.74
GAPVD1-208ENST00000431329 KRTAP10-1P60331 282 aa4.16□□□□□ -1.74
GAPVD1-208ENST00000431329 LINC01554Q52M75 96 aa4.16□□□□□ -1.74
GAPVD1-208ENST00000431329 TRAV22A0A0B4J277 110 aa4.16□□□□□ -1.74
GAPVD1-208ENST00000431329 FAM229AH3BQW9 127 aa4.15□□□□□ -1.74
GAPVD1-208ENST00000431329 IGLV7-43P04211 117 aa4.15□□□□□ -1.74
GAPVD1-208ENST00000431329 MMP24-AS1A0A0U1RRL7 71 aa4.15□□□□□ -1.75
GAPVD1-208ENST00000431329 LINC00483Q53H64 154 aa4.15□□□□□ -1.75
GAPVD1-208ENST00000431329 Q96NJ1 140 aa4.15□□□□□ -1.75
GAPVD1-208ENST00000431329 NDUFB1O75438 58 aa4.14□□□□□ -1.75
GAPVD1-208ENST00000431329 C7orf65Q6ZTY9 151 aa4.14□□□□□ -1.75
GAPVD1-208ENST00000431329 CDK2AP2O75956 126 aa4.14□□□□□ -1.75
GAPVD1-208ENST00000431329 SPINK6Q6UWN8 80 aa4.13□□□□□ -1.75
GAPVD1-208ENST00000431329 CYP4F30PQ9H0H9 118 aa4.13□□□□□ -1.75
GAPVD1-208ENST00000431329 A0A087X002 238 aa4.11□□□□□ -1.75
GAPVD1-208ENST00000431329 NOTCH2NLQ7Z3S9 236 aa4.11□□□□□ -1.75
GAPVD1-208ENST00000431329 C8orf17Q9NRJ1 99 aa4.1□□□□□ -1.75
GAPVD1-208ENST00000431329 A6NN06 94 aa4.1□□□□□ -1.75
GAPVD1-208ENST00000431329 H3BPC8 53 aa4.1□□□□□ -1.75
GAPVD1-208ENST00000431329 Q1T7F1 81 aa4.1□□□□□ -1.75
GAPVD1-208ENST00000431329 PCOTHQ58A44 107 aa4.1□□□□□ -1.75
GAPVD1-208ENST00000431329 DYNC1H1Q14204 4646 aaKnown RBP4.08□□□□□ -1.76
GAPVD1-208ENST00000431329 KMT2CQ8NEZ4 4911 aaKnown RBP4.08□□□□□ -1.76
GAPVD1-208ENST00000431329 A0A1B0GVX0 72 aa4.08□□□□□ -1.76
GAPVD1-208ENST00000431329 ASB16-AS1Q495Z4 193 aa4.08□□□□□ -1.76
GAPVD1-208ENST00000431329 SPANXA2-OT1Q8N9U9 137 aa4.08□□□□□ -1.76
GAPVD1-208ENST00000431329 KRTAP13-2Q52LG2 175 aa4.07□□□□□ -1.76
GAPVD1-208ENST00000431329 Q6ZSA8 131 aa4.07□□□□□ -1.76
GAPVD1-208ENST00000431329 SMR3BP02814 79 aaPredicted RBP4.06□□□□□ -1.76
GAPVD1-208ENST00000431329 TP53AIP1Q9HCN2 124 aa4.06□□□□□ -1.76
GAPVD1-208ENST00000431329 FAT1Q14517 4588 aa4.06□□□□□ -1.76
GAPVD1-208ENST00000431329 ATP11AUNQ6ZP68 121 aa4.05□□□□□ -1.76
GAPVD1-208ENST00000431329 MRPL34Q9BQ48 92 aaKnown RBP4.05□□□□□ -1.76
GAPVD1-208ENST00000431329 RYR2Q92736 4967 aa4.05□□□□□ -1.76
GAPVD1-208ENST00000431329 IGLV7-46A0A075B6I9 117 aa4.04□□□□□ -1.76
GAPVD1-208ENST00000431329 COA5Q86WW8 74 aa4.04□□□□□ -1.76
GAPVD1-208ENST00000431329 A8MU10 97 aa4.03□□□□□ -1.76
GAPVD1-208ENST00000431329 Q8N9P0 234 aaPredicted RBP4.03□□□□□ -1.76
GAPVD1-208ENST00000431329 RETNLBQ9BQ08 111 aa4.03□□□□□ -1.76
GAPVD1-208ENST00000431329 KRTAP1-4P0C5Y4 121 aa4.02□□□□□ -1.77
GAPVD1-208ENST00000431329 APOBP04114 4563 aaKnown RBP4.02□□□□□ -1.77
GAPVD1-208ENST00000431329 SPTSSBQ8NFR3 76 aa4.02□□□□□ -1.77
GAPVD1-208ENST00000431329 Q5VV11 94 aa4.01□□□□□ -1.77
GAPVD1-208ENST00000431329 Q5W150 140 aa4.01□□□□□ -1.77
GAPVD1-208ENST00000431329 SSBP3-AS1Q7Z2R9 100 aa4□□□□□ -1.77
GAPVD1-208ENST00000431329 PRR15LQ9BU68 103 aa4□□□□□ -1.77
GAPVD1-208ENST00000431329 ADM2Q7Z4H4 148 aa4□□□□□ -1.77
GAPVD1-208ENST00000431329 CHKB-CPT1BH3BT56 60 aa3.99□□□□□ -1.77
GAPVD1-208ENST00000431329 LIMD2Q9BT23 127 aa3.99□□□□□ -1.77
GAPVD1-208ENST00000431329 SPAG11AQ6PDA7 123 aa3.98□□□□□ -1.77
GAPVD1-208ENST00000431329 TYMSOSQ8TAI1 123 aa3.98□□□□□ -1.77
GAPVD1-208ENST00000431329 HRES1P13985 223 aa3.97□□□□□ -1.77
GAPVD1-208ENST00000431329 RYR3Q15413 4870 aa3.97□□□□□ -1.77
GAPVD1-208ENST00000431329 KRTAP16-1A8MUX0 517 aa3.96□□□□□ -1.77
GAPVD1-208ENST00000431329 KRTAP13-3Q3SY46 172 aa3.96□□□□□ -1.77
GAPVD1-208ENST00000431329 LOC101927531A0A1B0GV80 90 aa3.96□□□□□ -1.78
GAPVD1-208ENST00000431329 A0A1B0GVY2 172 aa3.96□□□□□ -1.78
GAPVD1-208ENST00000431329 A6NED7 52 aa3.94□□□□□ -1.78
GAPVD1-208ENST00000431329 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
GAPVD1-208ENST00000431329 PKHD1L1Q86WI1 4243 aa3.93□□□□□ -1.78
GAPVD1-208ENST00000431329 LRP1Q07954 4544 aaKnown RBP3.93□□□□□ -1.78
GAPVD1-208ENST00000431329 LINC01558Q9Y6Z2 57 aa3.92□□□□□ -1.78
GAPVD1-208ENST00000431329 LINC00304Q8N9R0 145 aa3.91□□□□□ -1.78
GAPVD1-208ENST00000431329 KRTAP10-4P60372 401 aaPredicted RBP3.9□□□□□ -1.78
GAPVD1-208ENST00000431329 C9orf92A6NGG3 77 aa3.9□□□□□ -1.79
GAPVD1-208ENST00000431329 ACYP2P14621 99 aa3.89□□□□□ -1.79
GAPVD1-208ENST00000431329 SPINK1P00995 79 aa3.89□□□□□ -1.79
GAPVD1-208ENST00000431329 SPINK7P58062 85 aa3.89□□□□□ -1.79
GAPVD1-208ENST00000431329 HSPG2P98160 4391 aa3.88□□□□□ -1.79
GAPVD1-208ENST00000431329 IGKV2D-30A0A075B6S6 120 aa3.88□□□□□ -1.79
GAPVD1-208ENST00000431329 IGKV2-30P06310 120 aa3.88□□□□□ -1.79
GAPVD1-208ENST00000431329 DMAC1Q96GE9 116 aa3.87□□□□□ -1.79
GAPVD1-208ENST00000431329 FLG2Q5D862 2391 aaPredicted RBP3.87□□□□□ -1.79
GAPVD1-208ENST00000431329 CDC42SE1Q9NRR8 79 aa3.86□□□□□ -1.79
GAPVD1-208ENST00000431329 LCE2BO14633 110 aa3.85□□□□□ -1.79
GAPVD1-208ENST00000431329 ROMO1P60602 79 aa3.85□□□□□ -1.79
GAPVD1-208ENST00000431329 LCE2CQ5TA81 110 aa3.85□□□□□ -1.79
GAPVD1-208ENST00000431329 TNXBP22105 4242 aa3.85□□□□□ -1.79
GAPVD1-208ENST00000431329 KIAA1109Q2LD37 5005 aa3.84□□□□□ -1.79
GAPVD1-208ENST00000431329 MYCBP2O75592 4640 aa3.84□□□□□ -1.79
GAPVD1-208ENST00000431329 KRTAP17-1Q9BYP8 105 aa3.84□□□□□ -1.8
GAPVD1-208ENST00000431329 RYR1P21817 5038 aa3.83□□□□□ -1.8
GAPVD1-208ENST00000431329 EPPK1P58107 5090 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 253 ms