RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 PSORS1C2Q9UIG4 136 aa8.01□□□□□ -1.13
SNRNP200-202ENST00000429650 IGLV5-52A0A0A0MRZ9 124 aa8.01□□□□□ -1.13
SNRNP200-202ENST00000429650 MOBPQ13875 183 aa8.01□□□□□ -1.13
SNRNP200-202ENST00000429650 WWC2-AS2Q96NR7 200 aa8.01□□□□□ -1.13
SNRNP200-202ENST00000429650 ASB16-AS1Q495Z4 193 aa8□□□□□ -1.13
SNRNP200-202ENST00000429650 Q75L30 129 aa7.99□□□□□ -1.13
SNRNP200-202ENST00000429650 FBN3Q75N90 2809 aa7.99□□□□□ -1.13
SNRNP200-202ENST00000429650 PLAC8Q9NZF1 115 aa7.98□□□□□ -1.13
SNRNP200-202ENST00000429650 C8orf17Q9NRJ1 99 aa7.98□□□□□ -1.13
SNRNP200-202ENST00000429650 ANAPC11Q9NYG5 84 aa7.97□□□□□ -1.13
SNRNP200-202ENST00000429650 ZNF861PO60384 105 aa7.97□□□□□ -1.13
SNRNP200-202ENST00000429650 Q6ZR54 194 aa7.97□□□□□ -1.13
SNRNP200-202ENST00000429650 DNAH6Q9C0G6 4158 aa7.95□□□□□ -1.14
SNRNP200-202ENST00000429650 TP53AIP1Q9HCN2 124 aa7.95□□□□□ -1.14
SNRNP200-202ENST00000429650 A0A1B0GVX0 72 aa7.94□□□□□ -1.14
SNRNP200-202ENST00000429650 IGHV6-1A0A0B4J1U7 121 aa7.94□□□□□ -1.14
SNRNP200-202ENST00000429650 IGLV7-46A0A075B6I9 117 aa7.91□□□□□ -1.14
SNRNP200-202ENST00000429650 CDK2AP2O75956 126 aa7.91□□□□□ -1.14
SNRNP200-202ENST00000429650 Q5VV11 94 aa7.9□□□□□ -1.15
SNRNP200-202ENST00000429650 PCOTHQ58A44 107 aa7.89□□□□□ -1.15
SNRNP200-202ENST00000429650 MRPL34Q9BQ48 92 aaKnown RBP7.89□□□□□ -1.15
SNRNP200-202ENST00000429650 A0A087X002 238 aa7.88□□□□□ -1.15
SNRNP200-202ENST00000429650 NOTCH2NLQ7Z3S9 236 aa7.88□□□□□ -1.15
SNRNP200-202ENST00000429650 C1orf134Q5TEV5 83 aa7.87□□□□□ -1.15
SNRNP200-202ENST00000429650 PLA2G1BP04054 148 aaKnown RBP7.87□□□□□ -1.15
SNRNP200-202ENST00000429650 IGLV7-43P04211 117 aa7.87□□□□□ -1.15
SNRNP200-202ENST00000429650 CHKB-CPT1BH3BT56 60 aa7.86□□□□□ -1.15
SNRNP200-202ENST00000429650 COA5Q86WW8 74 aa7.86□□□□□ -1.15
SNRNP200-202ENST00000429650 Q8N9P0 234 aaPredicted RBP7.86□□□□□ -1.15
SNRNP200-202ENST00000429650 DNAH11Q96DT5 4516 aa7.84□□□□□ -1.15
SNRNP200-202ENST00000429650 ALMS1Q8TCU4 4167 aa7.83□□□□□ -1.16
SNRNP200-202ENST00000429650 SPINK6Q6UWN8 80 aa7.82□□□□□ -1.16
SNRNP200-202ENST00000429650 LIMD2Q9BT23 127 aa7.82□□□□□ -1.16
SNRNP200-202ENST00000429650 CIRBP-AS1Q8TBR5 109 aa7.82□□□□□ -1.16
SNRNP200-202ENST00000429650 HYDINQ4G0P3 5121 aa7.81□□□□□ -1.16
SNRNP200-202ENST00000429650 J3QL48 77 aa7.81□□□□□ -1.16
SNRNP200-202ENST00000429650 DNAH5Q8TE73 4624 aa7.8□□□□□ -1.16
SNRNP200-202ENST00000429650 PRAC1Q96KF2 57 aa7.8□□□□□ -1.16
SNRNP200-202ENST00000429650 LY6G6CO95867 125 aa7.79□□□□□ -1.16
SNRNP200-202ENST00000429650 PRR15LQ9BU68 103 aa7.78□□□□□ -1.16
SNRNP200-202ENST00000429650 SSBP3-AS1Q7Z2R9 100 aa7.77□□□□□ -1.17
SNRNP200-202ENST00000429650 CDC42SE1Q9NRR8 79 aa7.77□□□□□ -1.17
SNRNP200-202ENST00000429650 Q5W150 140 aa7.76□□□□□ -1.17
SNRNP200-202ENST00000429650 KRTAP13-3Q3SY46 172 aa7.76□□□□□ -1.17
SNRNP200-202ENST00000429650 RETNLBQ9BQ08 111 aa7.76□□□□□ -1.17
SNRNP200-202ENST00000429650 KRTAP10-2P60368 255 aa7.75□□□□□ -1.17
SNRNP200-202ENST00000429650 LOC101927531A0A1B0GV80 90 aa7.75□□□□□ -1.17
SNRNP200-202ENST00000429650 HRES1P13985 223 aa7.73□□□□□ -1.17
SNRNP200-202ENST00000429650 LRP1BQ9NZR2 4599 aa7.73□□□□□ -1.17
SNRNP200-202ENST00000429650 A6NED7 52 aa7.73□□□□□ -1.17
SNRNP200-202ENST00000429650 SPAG11AQ6PDA7 123 aa7.69□□□□□ -1.18
SNRNP200-202ENST00000429650 KRTAP13-2Q52LG2 175 aa7.69□□□□□ -1.18
SNRNP200-202ENST00000429650 LINC01558Q9Y6Z2 57 aa7.69□□□□□ -1.18
SNRNP200-202ENST00000429650 FAT2Q9NYQ8 4349 aa7.67□□□□□ -1.18
SNRNP200-202ENST00000429650 Q6ZSA8 131 aa7.67□□□□□ -1.18
SNRNP200-202ENST00000429650 KRTAP10-1P60331 282 aa7.65□□□□□ -1.18
SNRNP200-202ENST00000429650 PKD1P98161 4303 aa7.65□□□□□ -1.18
SNRNP200-202ENST00000429650 ADM2Q7Z4H4 148 aa7.63□□□□□ -1.19
SNRNP200-202ENST00000429650 PKHD1P08F94 4074 aa7.63□□□□□ -1.19
SNRNP200-202ENST00000429650 VPS13BQ7Z7G8 4022 aa7.63□□□□□ -1.19
SNRNP200-202ENST00000429650 FAM229AH3BQW9 127 aa7.62□□□□□ -1.19
SNRNP200-202ENST00000429650 KRTAP1-4P0C5Y4 121 aa7.61□□□□□ -1.19
SNRNP200-202ENST00000429650 ACYP2P14621 99 aa7.6□□□□□ -1.19
SNRNP200-202ENST00000429650 KRTAP16-1A8MUX0 517 aa7.59□□□□□ -1.19
SNRNP200-202ENST00000429650 DMAC1Q96GE9 116 aa7.58□□□□□ -1.2
SNRNP200-202ENST00000429650 IGKV2-30P06310 120 aa7.57□□□□□ -1.2
SNRNP200-202ENST00000429650 SEC61BP60468 96 aaKnown RBP7.57□□□□□ -1.2
SNRNP200-202ENST00000429650 SPINK7P58062 85 aa7.54□□□□□ -1.2
SNRNP200-202ENST00000429650 ROMO1P60602 79 aa7.52□□□□□ -1.21
SNRNP200-202ENST00000429650 TYMSOSQ8TAI1 123 aa7.49□□□□□ -1.21
SNRNP200-202ENST00000429650 SPINK1P00995 79 aa7.47□□□□□ -1.21
SNRNP200-202ENST00000429650 IGKV2D-30A0A075B6S6 120 aa7.46□□□□□ -1.22
SNRNP200-202ENST00000429650 FAT1Q14517 4588 aa7.44□□□□□ -1.22
SNRNP200-202ENST00000429650 CSAG1Q6PB30 78 aa7.44□□□□□ -1.22
SNRNP200-202ENST00000429650 SACSQ9NZJ4 4579 aa7.43□□□□□ -1.22
SNRNP200-202ENST00000429650 A0A1B0GU69 56 aa7.4□□□□□ -1.23
SNRNP200-202ENST00000429650 SMR3BP02814 79 aaPredicted RBP7.39□□□□□ -1.23
SNRNP200-202ENST00000429650 LINC00304Q8N9R0 145 aa7.39□□□□□ -1.23
SNRNP200-202ENST00000429650 RPS29P62273 56 aaKnown RBP7.37□□□□□ -1.23
SNRNP200-202ENST00000429650 MIR22HGQ0VDD5 57 aa7.35□□□□□ -1.23
SNRNP200-202ENST00000429650 DYNC1H1Q14204 4646 aaKnown RBP7.35□□□□□ -1.23
SNRNP200-202ENST00000429650 KMT2CQ8NEZ4 4911 aaKnown RBP7.33□□□□□ -1.24
SNRNP200-202ENST00000429650 P0C880 135 aa7.32□□□□□ -1.24
SNRNP200-202ENST00000429650 PKHD1L1Q86WI1 4243 aa7.3□□□□□ -1.24
SNRNP200-202ENST00000429650 SPATA8Q6RVD6 105 aa7.29□□□□□ -1.24
SNRNP200-202ENST00000429650 Q8N1X5 172 aa7.29□□□□□ -1.24
SNRNP200-202ENST00000429650 UQCR11O14957 56 aa7.27□□□□□ -1.25
SNRNP200-202ENST00000429650 KRTAP21-3Q3LHN1 58 aa7.26□□□□□ -1.25
SNRNP200-202ENST00000429650 APOBP04114 4563 aaKnown RBP7.26□□□□□ -1.25
SNRNP200-202ENST00000429650 C9orf92A6NGG3 77 aa7.25□□□□□ -1.25
SNRNP200-202ENST00000429650 A8MUU9 505 aa7.24□□□□□ -1.25
SNRNP200-202ENST00000429650 KRTAP10-4P60372 401 aaPredicted RBP7.24□□□□□ -1.25
SNRNP200-202ENST00000429650 C20orf166-AS1Q96NR2 134 aa7.24□□□□□ -1.25
SNRNP200-202ENST00000429650 LUZP6Q538Z0 58 aa7.23□□□□□ -1.25
SNRNP200-202ENST00000429650 A0A1B0GVY2 172 aa7.22□□□□□ -1.25
SNRNP200-202ENST00000429650 LRP1Q07954 4544 aaKnown RBP7.19□□□□□ -1.26
SNRNP200-202ENST00000429650 RYR2Q92736 4967 aa7.16□□□□□ -1.26
SNRNP200-202ENST00000429650 KRTAP3-1Q9BYR8 98 aa7.14□□□□□ -1.27
SNRNP200-202ENST00000429650 MYCBP2O75592 4640 aa7.11□□□□□ -1.27
SNRNP200-202ENST00000429650 NDUFAF8A1L188 74 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms