RNA–Protein interactions for RNA: ENST00000424085.6

PUM1-205, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 5 BASIC

Gene PUM1, Length 4,631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-205ENST00000424085 APCP25054 2843 aa4.64□□□□□ -1.67
PUM1-205ENST00000424085 Q5VV11 94 aa4.63□□□□□ -1.67
PUM1-205ENST00000424085 CELSR2Q9HCU4 2923 aa4.63□□□□□ -1.67
PUM1-205ENST00000424085 RPL37P61927 97 aaKnown RBP4.63□□□□□ -1.67
PUM1-205ENST00000424085 NF1P21359 2839 aa4.63□□□□□ -1.67
PUM1-205ENST00000424085 LINC01558Q9Y6Z2 57 aa4.62□□□□□ -1.67
PUM1-205ENST00000424085 FBN2P35556 2912 aa4.62□□□□□ -1.67
PUM1-205ENST00000424085 NIPBLQ6KC79 2804 aaeCLIP4.61□□□□□ -1.671e-6■■■□□ 16.1
PUM1-205ENST00000424085 DCHS1Q96JQ0 3298 aa4.61□□□□□ -1.67
PUM1-205ENST00000424085 A0A087X002 238 aa4.6□□□□□ -1.67
PUM1-205ENST00000424085 KRTAP29-1A8MX34 341 aaPredicted RBP4.6□□□□□ -1.67
PUM1-205ENST00000424085 PANO1I0J062 215 aa4.6□□□□□ -1.67
PUM1-205ENST00000424085 DCHS2Q6V1P9 2916 aa4.58□□□□□ -1.68
PUM1-205ENST00000424085 ZFHX4Q86UP3 3567 aa4.58□□□□□ -1.68
PUM1-205ENST00000424085 CRYBG3Q68DQ2 2970 aa4.58□□□□□ -1.68
PUM1-205ENST00000424085 RELNP78509 3460 aa4.57□□□□□ -1.68
PUM1-205ENST00000424085 ADM2Q7Z4H4 148 aa4.57□□□□□ -1.68
PUM1-205ENST00000424085 ASPMQ8IZT6 3477 aa4.57□□□□□ -1.68
PUM1-205ENST00000424085 RPS29P62273 56 aaKnown RBP4.57□□□□□ -1.68
PUM1-205ENST00000424085 MXRA5Q9NR99 2828 aa4.57□□□□□ -1.68
PUM1-205ENST00000424085 KRTAP7-1Q8IUC3 87 aa4.57□□□□□ -1.68
PUM1-205ENST00000424085 A0A0A0MQY5 61 aa4.56□□□□□ -1.68
PUM1-205ENST00000424085 H1FX-AS1Q4G0G2 97 aa4.56□□□□□ -1.68
PUM1-205ENST00000424085 LAMA5O15230 3695 aa4.55□□□□□ -1.68
PUM1-205ENST00000424085 C20orf166-AS1Q96NR2 134 aa4.55□□□□□ -1.68
PUM1-205ENST00000424085 DMDP11532 3685 aa4.54□□□□□ -1.68
PUM1-205ENST00000424085 MUC3AQ02505 3323 aa4.52□□□□□ -1.69
PUM1-205ENST00000424085 Q6ZRN7 208 aaPredicted RBP4.52□□□□□ -1.69
PUM1-205ENST00000424085 KRTAP11-1Q8IUC1 163 aa4.52□□□□□ -1.69
PUM1-205ENST00000424085 ROMO1P60602 79 aa4.51□□□□□ -1.69
PUM1-205ENST00000424085 ASB16-AS1Q495Z4 193 aa4.5□□□□□ -1.69
PUM1-205ENST00000424085 SMG1Q96Q15 3661 aaKnown RBP4.49□□□□□ -1.69
PUM1-205ENST00000424085 TENM1Q9UKZ4 2725 aa4.48□□□□□ -1.69
PUM1-205ENST00000424085 A8MUU9 505 aa4.48□□□□□ -1.69
PUM1-205ENST00000424085 TENM2Q9NT68 2774 aa4.48□□□□□ -1.69
PUM1-205ENST00000424085 PRAC1Q96KF2 57 aa4.47□□□□□ -1.69
PUM1-205ENST00000424085 NOTCH2NLQ7Z3S9 236 aa4.47□□□□□ -1.69
PUM1-205ENST00000424085 CSMD1Q96PZ7 3565 aa4.46□□□□□ -1.69
PUM1-205ENST00000424085 SPATA8Q6RVD6 105 aa4.44□□□□□ -1.7
PUM1-205ENST00000424085 KRTAP13-1Q8IUC0 172 aa4.43□□□□□ -1.7
PUM1-205ENST00000424085 KRTAP13-2Q52LG2 175 aa4.42□□□□□ -1.7
PUM1-205ENST00000424085 CELSR1Q9NYQ6 3014 aa4.4□□□□□ -1.7
PUM1-205ENST00000424085 A8MU10 97 aa4.39□□□□□ -1.71
PUM1-205ENST00000424085 A6NN06 94 aa4.37□□□□□ -1.71
PUM1-205ENST00000424085 TNP1P09430 55 aa4.37□□□□□ -1.71
PUM1-205ENST00000424085 SVEP1Q4LDE5 3571 aa4.36□□□□□ -1.71
PUM1-205ENST00000424085 PKD1L1Q8TDX9 2849 aa4.35□□□□□ -1.71
PUM1-205ENST00000424085 KRTAP10-8P60410 259 aa4.31□□□□□ -1.72
PUM1-205ENST00000424085 VWFP04275 2813 aa4.29□□□□□ -1.72
PUM1-205ENST00000424085 PDZD2O15018 2839 aa4.28□□□□□ -1.72
PUM1-205ENST00000424085 TPRXLQ17RH7 258 aa4.27□□□□□ -1.73
PUM1-205ENST00000424085 KRTAP10-10P60014 251 aa4.26□□□□□ -1.73
PUM1-205ENST00000424085 SRRM2Q9UQ35 2752 aaKnown RBP4.26□□□□□ -1.73
PUM1-205ENST00000424085 XP32Q5T750 250 aa4.26□□□□□ -1.73
PUM1-205ENST00000424085 SPENQ96T58 3664 aaKnown RBP4.25□□□□□ -1.73
PUM1-205ENST00000424085 PRO2289Q9P1D8 64 aa4.25□□□□□ -1.73
PUM1-205ENST00000424085 A0A1B0GVY2 172 aa4.25□□□□□ -1.73
PUM1-205ENST00000424085 H3BS24 57 aa4.25□□□□□ -1.73
PUM1-205ENST00000424085 CUBNO60494 3623 aa4.24□□□□□ -1.73
PUM1-205ENST00000424085 KRTAP1-4P0C5Y4 121 aa4.2□□□□□ -1.74
PUM1-205ENST00000424085 FBN1P35555 2871 aaKnown RBP4.2□□□□□ -1.74
PUM1-205ENST00000424085 BSNQ9UPA5 3926 aa4.19□□□□□ -1.74
PUM1-205ENST00000424085 PP632Q6XCG6 107 aa4.18□□□□□ -1.74
PUM1-205ENST00000424085 KRTAP25-1Q3LHN0 102 aa4.17□□□□□ -1.74
PUM1-205ENST00000424085 OTOGQ6ZRI0 2925 aa4.17□□□□□ -1.74
PUM1-205ENST00000424085 C10orf95Q9H7T3 257 aa4.16□□□□□ -1.74
PUM1-205ENST00000424085 NBPF19A0A087WUL8 3843 aa4.15□□□□□ -1.75
PUM1-205ENST00000424085 TGP01266 2768 aa4.14□□□□□ -1.75
PUM1-205ENST00000424085 FBN3Q75N90 2809 aa4.14□□□□□ -1.75
PUM1-205ENST00000424085 ZFHX3Q15911 3703 aa4.13□□□□□ -1.75
PUM1-205ENST00000424085 CSMD2Q7Z408 3487 aa4.12□□□□□ -1.75
PUM1-205ENST00000424085 KRTAP16-1A8MUX0 517 aa4.12□□□□□ -1.75
PUM1-205ENST00000424085 KRTAP13-3Q3SY46 172 aa4.11□□□□□ -1.75
PUM1-205ENST00000424085 ANK3Q12955 4377 aaKnown RBP4.06□□□□□ -1.76
PUM1-205ENST00000424085 H0YAA0 97 aa4.06□□□□□ -1.76
PUM1-205ENST00000424085 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
PUM1-205ENST00000424085 TRRAPQ9Y4A5 3859 aa4.04□□□□□ -1.76
PUM1-205ENST00000424085 VPS13CQ709C8 3753 aa4□□□□□ -1.77
PUM1-205ENST00000424085 P0C880 135 aa3.96□□□□□ -1.78
PUM1-205ENST00000424085 MEGF8Q7Z7M0 2845 aa3.92□□□□□ -1.78
PUM1-205ENST00000424085 KRTAP3-1Q9BYR8 98 aa3.86□□□□□ -1.79
PUM1-205ENST00000424085 ZNF469Q96JG9 3925 aaPredicted RBP3.85□□□□□ -1.79
PUM1-205ENST00000424085 COL7A1Q02388 2944 aa3.84□□□□□ -1.8
PUM1-205ENST00000424085 AKAP9Q99996 3911 aa3.82□□□□□ -1.8
PUM1-205ENST00000424085 HUWE1Q7Z6Z7 4374 aaKnown RBP3.79□□□□□ -1.8
PUM1-205ENST00000424085 KRTAP12-2P59991 146 aa3.77□□□□□ -1.81
PUM1-205ENST00000424085 KRTAP13-4Q3LI77 160 aa3.77□□□□□ -1.81
PUM1-205ENST00000424085 CSMD3Q7Z407 3707 aa3.74□□□□□ -1.81
PUM1-205ENST00000424085 KRTAP10-6P60371 365 aaPredicted RBP3.73□□□□□ -1.81
PUM1-205ENST00000424085 KRTAP12-1P59990 96 aa3.72□□□□□ -1.81
PUM1-205ENST00000424085 KRTAP15-1Q3LI76 137 aa3.71□□□□□ -1.82
PUM1-205ENST00000424085 MT1HL1P0DM35 61 aa3.66□□□□□ -1.82
PUM1-205ENST00000424085 KRTAP3-3Q9BYR6 98 aa3.64□□□□□ -1.83
PUM1-205ENST00000424085 KRTAP3-2Q9BYR7 98 aa3.63□□□□□ -1.83
PUM1-205ENST00000424085 DNAH9Q9NYC9 4486 aa3.63□□□□□ -1.83
PUM1-205ENST00000424085 KRTAP10-4P60372 401 aaPredicted RBP3.61□□□□□ -1.83
PUM1-205ENST00000424085 PLECQ15149 4684 aaKnown RBP3.59□□□□□ -1.83
PUM1-205ENST00000424085 DNAH10Q8IVF4 4471 aa3.59□□□□□ -1.83
PUM1-205ENST00000424085 DNAH1Q9P2D7 4330 aa3.58□□□□□ -1.84
PUM1-205ENST00000424085 CRCT1Q9UGL9 99 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms