RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 C8orf87E5RJ46 101 aa9.16□□□□□ -0.94
SHISA9-201ENST00000423335 ANK3Q12955 4377 aaKnown RBP9.16□□□□□ -0.94
SHISA9-201ENST00000423335 IGLV7-46A0A075B6I9 117 aa9.15□□□□□ -0.94
SHISA9-201ENST00000423335 LCE6AA0A183 80 aa9.15□□□□□ -0.94
SHISA9-201ENST00000423335 SSBP3-AS1Q7Z2R9 100 aa9.15□□□□□ -0.94
SHISA9-201ENST00000423335 CD164Q04900 197 aa9.14□□□□□ -0.95
SHISA9-201ENST00000423335 Q6ZR54 194 aa9.14□□□□□ -0.95
SHISA9-201ENST00000423335 Q5VV11 94 aa9.12□□□□□ -0.95
SHISA9-201ENST00000423335 KRTAP11-1Q8IUC1 163 aa9.12□□□□□ -0.95
SHISA9-201ENST00000423335 KTN1-AS1Q86SY8 53 aa9.11□□□□□ -0.95
SHISA9-201ENST00000423335 PLAC8Q9NZF1 115 aa9.11□□□□□ -0.95
SHISA9-201ENST00000423335 UQCR11O14957 56 aa9.1□□□□□ -0.95
SHISA9-201ENST00000423335 FBN3Q75N90 2809 aa9.1□□□□□ -0.95
SHISA9-201ENST00000423335 Q8N1X5 172 aa9.09□□□□□ -0.95
SHISA9-201ENST00000423335 SPRR1BP22528 89 aa9.08□□□□□ -0.96
SHISA9-201ENST00000423335 CDC42SE1Q9NRR8 79 aa9.08□□□□□ -0.96
SHISA9-201ENST00000423335 MIR22HGQ0VDD5 57 aa9.07□□□□□ -0.96
SHISA9-201ENST00000423335 ZCCHC13Q8WW36 166 aaKnown RBP9.06□□□□□ -0.96
SHISA9-201ENST00000423335 HRES1P13985 223 aa9.06□□□□□ -0.96
SHISA9-201ENST00000423335 Q6ZRN7 208 aaPredicted RBP9.05□□□□□ -0.96
SHISA9-201ENST00000423335 KRTAP29-1A8MX34 341 aaPredicted RBP9.04□□□□□ -0.96
SHISA9-201ENST00000423335 SPINK7P58062 85 aa9.02□□□□□ -0.97
SHISA9-201ENST00000423335 Q75L30 129 aa9.01□□□□□ -0.97
SHISA9-201ENST00000423335 A0A087X002 238 aa8.99□□□□□ -0.97
SHISA9-201ENST00000423335 A8MU10 97 aa8.99□□□□□ -0.97
SHISA9-201ENST00000423335 NOTCH2NLQ7Z3S9 236 aa8.99□□□□□ -0.97
SHISA9-201ENST00000423335 LINC01558Q9Y6Z2 57 aa8.96□□□□□ -0.97
SHISA9-201ENST00000423335 PRAC1Q96KF2 57 aa8.94□□□□□ -0.98
SHISA9-201ENST00000423335 RBM12B-AS1Q9P1G2 102 aa8.94□□□□□ -0.98
SHISA9-201ENST00000423335 KRTAP21-3Q3LHN1 58 aa8.93□□□□□ -0.98
SHISA9-201ENST00000423335 Q5VSD8 79 aa8.92□□□□□ -0.98
SHISA9-201ENST00000423335 Q5W150 140 aa8.9□□□□□ -0.98
SHISA9-201ENST00000423335 LCA10Q71F78 164 aa8.9□□□□□ -0.98
SHISA9-201ENST00000423335 AKAP9Q99996 3911 aa8.86□□□□□ -0.99
SHISA9-201ENST00000423335 MEGF8Q7Z7M0 2845 aa8.84□□□□□ -1
SHISA9-201ENST00000423335 LINC00483Q53H64 154 aa8.79□□□□□ -1
SHISA9-201ENST00000423335 A0A0D9SG42 100 aa8.77□□□□□ -1.01
SHISA9-201ENST00000423335 CSMD3Q7Z407 3707 aa8.76□□□□□ -1.01
SHISA9-201ENST00000423335 COX6B2Q6YFQ2 88 aa8.75□□□□□ -1.01
SHISA9-201ENST00000423335 H3BS24 57 aa8.72□□□□□ -1.01
SHISA9-201ENST00000423335 KRTAP13-1Q8IUC0 172 aa8.71□□□□□ -1.01
SHISA9-201ENST00000423335 DMAC1Q96GE9 116 aa8.7□□□□□ -1.02
SHISA9-201ENST00000423335 SPINT4Q6UDR6 99 aa8.69□□□□□ -1.02
SHISA9-201ENST00000423335 A0A1B0GU33 70 aa8.68□□□□□ -1.02
SHISA9-201ENST00000423335 CRIPTQ9P021 101 aa8.67□□□□□ -1.02
SHISA9-201ENST00000423335 CSAG1Q6PB30 78 aa8.66□□□□□ -1.02
SHISA9-201ENST00000423335 LINC01554Q52M75 96 aa8.64□□□□□ -1.03
SHISA9-201ENST00000423335 KRTAP13-2Q52LG2 175 aa8.63□□□□□ -1.03
SHISA9-201ENST00000423335 DNHD1Q96M86 4753 aa8.61□□□□□ -1.03
SHISA9-201ENST00000423335 ADM2Q7Z4H4 148 aa8.59□□□□□ -1.03
SHISA9-201ENST00000423335 Q6ZSA8 131 aa8.59□□□□□ -1.03
SHISA9-201ENST00000423335 A6NN06 94 aa8.57□□□□□ -1.04
SHISA9-201ENST00000423335 SPATA8Q6RVD6 105 aa8.49□□□□□ -1.05
SHISA9-201ENST00000423335 ASB16-AS1Q495Z4 193 aa8.41□□□□□ -1.06
SHISA9-201ENST00000423335 KRTAP1-4P0C5Y4 121 aa8.37□□□□□ -1.07
SHISA9-201ENST00000423335 M0R2T5 61 aa8.37□□□□□ -1.07
SHISA9-201ENST00000423335 H1FX-AS1Q4G0G2 97 aa8.35□□□□□ -1.07
SHISA9-201ENST00000423335 HUWE1Q7Z6Z7 4374 aaKnown RBP8.33□□□□□ -1.08
SHISA9-201ENST00000423335 S4R3F8 94 aa8.28□□□□□ -1.08
SHISA9-201ENST00000423335 RPL37P61927 97 aaKnown RBP8.27□□□□□ -1.09
SHISA9-201ENST00000423335 SEC61BP60468 96 aaKnown RBP8.26□□□□□ -1.09
SHISA9-201ENST00000423335 A0A1B0GVY2 172 aa8.2□□□□□ -1.1
SHISA9-201ENST00000423335 ANK2Q01484 3957 aa8.19□□□□□ -1.1
SHISA9-201ENST00000423335 ROMO1P60602 79 aa8.19□□□□□ -1.1
SHISA9-201ENST00000423335 DNAH9Q9NYC9 4486 aa8.17□□□□□ -1.1
SHISA9-201ENST00000423335 KRTAP16-1A8MUX0 517 aa8.13□□□□□ -1.11
SHISA9-201ENST00000423335 KRTAP25-1Q3LHN0 102 aa8.12□□□□□ -1.11
SHISA9-201ENST00000423335 KRTAP13-3Q3SY46 172 aa8.12□□□□□ -1.11
SHISA9-201ENST00000423335 PLECQ15149 4684 aaKnown RBP8.11□□□□□ -1.11
SHISA9-201ENST00000423335 DNAH10Q8IVF4 4471 aa8.1□□□□□ -1.11
SHISA9-201ENST00000423335 RPS29P62273 56 aaKnown RBP8.1□□□□□ -1.11
SHISA9-201ENST00000423335 R4GN34 69 aa8.1□□□□□ -1.11
SHISA9-201ENST00000423335 CAMK2N1Q7Z7J9 78 aa8.07□□□□□ -1.12
SHISA9-201ENST00000423335 PRKDCP78527 4128 aaKnown RBP8.07□□□□□ -1.12
SHISA9-201ENST00000423335 A8MUU9 505 aa8.05□□□□□ -1.12
SHISA9-201ENST00000423335 H0YAA0 97 aa8.05□□□□□ -1.12
SHISA9-201ENST00000423335 M0QZ58 72 aa8.03□□□□□ -1.12
SHISA9-201ENST00000423335 C20orf166-AS1Q96NR2 134 aa8.03□□□□□ -1.12
SHISA9-201ENST00000423335 XP32Q5T750 250 aa7.99□□□□□ -1.13
SHISA9-201ENST00000423335 LYSTQ99698 3801 aa7.97□□□□□ -1.13
SHISA9-201ENST00000423335 DNAH11Q96DT5 4516 aa7.97□□□□□ -1.13
SHISA9-201ENST00000423335 KRTAP10-8P60410 259 aa7.93□□□□□ -1.14
SHISA9-201ENST00000423335 STARD9Q9P2P6 4700 aa7.92□□□□□ -1.14
SHISA9-201ENST00000423335 LUZP6Q538Z0 58 aa7.91□□□□□ -1.14
SHISA9-201ENST00000423335 C10orf95Q9H7T3 257 aa7.91□□□□□ -1.14
SHISA9-201ENST00000423335 DNAH5Q8TE73 4624 aa7.91□□□□□ -1.14
SHISA9-201ENST00000423335 FAT1Q14517 4588 aa7.86□□□□□ -1.15
SHISA9-201ENST00000423335 KRTAP4-5Q9BYR2 181 aa7.84□□□□□ -1.15
SHISA9-201ENST00000423335 NDUFAF8A1L188 74 aa7.82□□□□□ -1.16
SHISA9-201ENST00000423335 DNAH1Q9P2D7 4330 aa7.81□□□□□ -1.16
SHISA9-201ENST00000423335 P0C880 135 aa7.78□□□□□ -1.16
SHISA9-201ENST00000423335 CMYA5Q8N3K9 4069 aa7.75□□□□□ -1.17
SHISA9-201ENST00000423335 TPRXLQ17RH7 258 aa7.75□□□□□ -1.17
SHISA9-201ENST00000423335 KMT2AQ03164 3969 aa7.74□□□□□ -1.17
SHISA9-201ENST00000423335 KIAA1109Q2LD37 5005 aa7.73□□□□□ -1.17
SHISA9-201ENST00000423335 KRTAP3-1Q9BYR8 98 aa7.72□□□□□ -1.17
SHISA9-201ENST00000423335 DNAH7Q8WXX0 4024 aa7.7□□□□□ -1.18
SHISA9-201ENST00000423335 RYR1P21817 5038 aa7.66□□□□□ -1.18
SHISA9-201ENST00000423335 DYNC1H1Q14204 4646 aaKnown RBP7.65□□□□□ -1.18
SHISA9-201ENST00000423335 VPS13DQ5THJ4 4388 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms