RNA–Protein interactions for RNA: ENST00000419308.6

FOXA2-202, Transcript of forkhead box A2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FOXA2, Length 2,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-202ENST00000419308 NDUFS5O43920 106 aa15.59■□□□□ 0.09
FOXA2-202ENST00000419308 SPINK6Q6UWN8 80 aa15.57■□□□□ 0.08
FOXA2-202ENST00000419308 Q1T7F1 81 aa15.57■□□□□ 0.08
FOXA2-202ENST00000419308 CD164Q04900 197 aa15.56■□□□□ 0.08
FOXA2-202ENST00000419308 SSBP3-AS1Q7Z2R9 100 aa15.56■□□□□ 0.08
FOXA2-202ENST00000419308 Q6ZSA8 131 aa15.54■□□□□ 0.08
FOXA2-202ENST00000419308 PKD1P98161 4303 aa15.52■□□□□ 0.08
FOXA2-202ENST00000419308 KRTAP10-1P60331 282 aa15.52■□□□□ 0.08
FOXA2-202ENST00000419308 PRO0628Q9UI54 55 aa15.51■□□□□ 0.07
FOXA2-202ENST00000419308 PCOTHQ58A44 107 aa15.5■□□□□ 0.07
FOXA2-202ENST00000419308 IGLV7-46A0A075B6I9 117 aa15.49■□□□□ 0.07
FOXA2-202ENST00000419308 HYDINQ4G0P3 5121 aa15.48■□□□□ 0.07
FOXA2-202ENST00000419308 LRP1BQ9NZR2 4599 aa15.46■□□□□ 0.07
FOXA2-202ENST00000419308 FAT2Q9NYQ8 4349 aa15.45■□□□□ 0.06
FOXA2-202ENST00000419308 BRK1Q8WUW1 75 aa15.43■□□□□ 0.06
FOXA2-202ENST00000419308 KRTAP13-2Q52LG2 175 aa15.43■□□□□ 0.06
FOXA2-202ENST00000419308 PSPHP1O15172 72 aa15.37■□□□□ 0.05
FOXA2-202ENST00000419308 Q5W150 140 aa15.35■□□□□ 0.05
FOXA2-202ENST00000419308 COA5Q86WW8 74 aa15.35■□□□□ 0.05
FOXA2-202ENST00000419308 C8orf87E5RJ46 101 aa15.34■□□□□ 0.05
FOXA2-202ENST00000419308 V9GYY9 64 aa15.34■□□□□ 0.05
FOXA2-202ENST00000419308 KRTAP13-3Q3SY46 172 aa15.33■□□□□ 0.04
FOXA2-202ENST00000419308 KRTAP1-4P0C5Y4 121 aa15.3■□□□□ 0.04
FOXA2-202ENST00000419308 Q8N9P0 234 aaPredicted RBP15.29■□□□□ 0.04
FOXA2-202ENST00000419308 C1orf195Q5TG92 126 aa15.29■□□□□ 0.04
FOXA2-202ENST00000419308 LOC101927531A0A1B0GV80 90 aa15.28■□□□□ 0.04
FOXA2-202ENST00000419308 VPS13BQ7Z7G8 4022 aa15.27■□□□□ 0.04
FOXA2-202ENST00000419308 A8MUN3 132 aa15.27■□□□□ 0.03
FOXA2-202ENST00000419308 LINC00313P59037 77 aa15.25■□□□□ 0.03
FOXA2-202ENST00000419308 LIMD2Q9BT23 127 aa15.21■□□□□ 0.02
FOXA2-202ENST00000419308 Q5VV11 94 aa15.17■□□□□ 0.02
FOXA2-202ENST00000419308 HRES1P13985 223 aa15.15■□□□□ 0.02
FOXA2-202ENST00000419308 KRTAP21-3Q3LHN1 58 aa15.15■□□□□ 0.02
FOXA2-202ENST00000419308 PLA2G1BP04054 148 aaKnown RBP15.13■□□□□ 0.01
FOXA2-202ENST00000419308 FAM229AH3BQW9 127 aa15.1■□□□□ 0.01
FOXA2-202ENST00000419308 PRR15LQ9BU68 103 aa15.1■□□□□ 0.01
FOXA2-202ENST00000419308 KRTAP16-1A8MUX0 517 aa15.09■□□□□ 0.01
FOXA2-202ENST00000419308 PKHD1P08F94 4074 aa15.08■□□□□ 0
FOXA2-202ENST00000419308 TYMSOSQ8TAI1 123 aa15.06■□□□□ 0
FOXA2-202ENST00000419308 RETNLBQ9BQ08 111 aa15.05■□□□□ 0
FOXA2-202ENST00000419308 C4orf48Q5BLP8 95 aa15.04■□□□□ -0
FOXA2-202ENST00000419308 SPAG11AQ6PDA7 123 aa15.02■□□□□ -0
FOXA2-202ENST00000419308 CHKB-CPT1BH3BT56 60 aa15.01□□□□□ -0.01
FOXA2-202ENST00000419308 SACSQ9NZJ4 4579 aa15.01□□□□□ -0.01
FOXA2-202ENST00000419308 SPINK1P00995 79 aa15□□□□□ -0.01
FOXA2-202ENST00000419308 LINC01558Q9Y6Z2 57 aa14.97□□□□□ -0.01
FOXA2-202ENST00000419308 IGKV2-30P06310 120 aa14.97□□□□□ -0.01
FOXA2-202ENST00000419308 Q75L30 129 aa14.96□□□□□ -0.01
FOXA2-202ENST00000419308 ACYP2P14621 99 aa14.93□□□□□ -0.02
FOXA2-202ENST00000419308 A8MU10 97 aa14.91□□□□□ -0.02
FOXA2-202ENST00000419308 PRR26Q8N8Z3 221 aa14.91□□□□□ -0.02
FOXA2-202ENST00000419308 DMAC1Q96GE9 116 aa14.91□□□□□ -0.02
FOXA2-202ENST00000419308 DYNC1H1Q14204 4646 aaKnown RBP14.86□□□□□ -0.03
FOXA2-202ENST00000419308 LINC00304Q8N9R0 145 aa14.86□□□□□ -0.03
FOXA2-202ENST00000419308 SMR3BP02814 79 aaPredicted RBP14.85□□□□□ -0.03
FOXA2-202ENST00000419308 A6NED7 52 aa14.81□□□□□ -0.04
FOXA2-202ENST00000419308 RPS29P62273 56 aaKnown RBP14.81□□□□□ -0.04
FOXA2-202ENST00000419308 IGKV2D-30A0A075B6S6 120 aa14.79□□□□□ -0.04
FOXA2-202ENST00000419308 A0A1B0GVY2 172 aa14.78□□□□□ -0.04
FOXA2-202ENST00000419308 LCA10Q71F78 164 aa14.76□□□□□ -0.05
FOXA2-202ENST00000419308 FAT1Q14517 4588 aa14.7□□□□□ -0.06
FOXA2-202ENST00000419308 KRTAP10-4P60372 401 aaPredicted RBP14.7□□□□□ -0.06
FOXA2-202ENST00000419308 APOBP04114 4563 aaKnown RBP14.68□□□□□ -0.06
FOXA2-202ENST00000419308 SPINK7P58062 85 aa14.65□□□□□ -0.06
FOXA2-202ENST00000419308 CDC42SE1Q9NRR8 79 aa14.65□□□□□ -0.06
FOXA2-202ENST00000419308 PKHD1L1Q86WI1 4243 aa14.58□□□□□ -0.07
FOXA2-202ENST00000419308 PMAIP1Q13794 54 aa14.58□□□□□ -0.08
FOXA2-202ENST00000419308 ATP11AUNQ6ZP68 121 aa14.58□□□□□ -0.08
FOXA2-202ENST00000419308 C7orf65Q6ZTY9 151 aa14.58□□□□□ -0.08
FOXA2-202ENST00000419308 SPTSSBQ8NFR3 76 aa14.58□□□□□ -0.08
FOXA2-202ENST00000419308 RYR2Q92736 4967 aa14.54□□□□□ -0.08
FOXA2-202ENST00000419308 C9orf92A6NGG3 77 aa14.51□□□□□ -0.09
FOXA2-202ENST00000419308 A0A1B0GU69 56 aa14.46□□□□□ -0.09
FOXA2-202ENST00000419308 C20orf166-AS1Q96NR2 134 aa14.46□□□□□ -0.09
FOXA2-202ENST00000419308 A8MUU9 505 aa14.46□□□□□ -0.09
FOXA2-202ENST00000419308 KMT2CQ8NEZ4 4911 aaKnown RBP14.43□□□□□ -0.1
FOXA2-202ENST00000419308 Q8N1X5 172 aa14.42□□□□□ -0.1
FOXA2-202ENST00000419308 A6NN06 94 aa14.35□□□□□ -0.11
FOXA2-202ENST00000419308 FLG2Q5D862 2391 aaPredicted RBP14.3□□□□□ -0.12
FOXA2-202ENST00000419308 SEC61GP60059 68 aa14.29□□□□□ -0.12
FOXA2-202ENST00000419308 KTN1-AS1Q86SY8 53 aa14.22□□□□□ -0.13
FOXA2-202ENST00000419308 SPATA8Q6RVD6 105 aa14.19□□□□□ -0.14
FOXA2-202ENST00000419308 UQCR11O14957 56 aa14.19□□□□□ -0.14
FOXA2-202ENST00000419308 KRTAP3-1Q9BYR8 98 aa14.17□□□□□ -0.14
FOXA2-202ENST00000419308 LRP1Q07954 4544 aaKnown RBP14.17□□□□□ -0.14
FOXA2-202ENST00000419308 TNXBP22105 4242 aa14.14□□□□□ -0.15
FOXA2-202ENST00000419308 MIR22HGQ0VDD5 57 aa14.13□□□□□ -0.15
FOXA2-202ENST00000419308 FAT3Q8TDW7 4589 aa14.13□□□□□ -0.15
FOXA2-202ENST00000419308 KRTAP10-8P60410 259 aa14.12□□□□□ -0.15
FOXA2-202ENST00000419308 Q5VSD8 79 aa14.09□□□□□ -0.15
FOXA2-202ENST00000419308 HSPG2P98160 4391 aa14.08□□□□□ -0.16
FOXA2-202ENST00000419308 RYR3Q15413 4870 aa13.96□□□□□ -0.18
FOXA2-202ENST00000419308 COX6B2Q6YFQ2 88 aa13.95□□□□□ -0.18
FOXA2-202ENST00000419308 RYR1P21817 5038 aa13.92□□□□□ -0.18
FOXA2-202ENST00000419308 DMBT1Q9UGM3 2413 aaPredicted RBP13.91□□□□□ -0.18
FOXA2-202ENST00000419308 KRTAP17-1Q9BYP8 105 aa13.89□□□□□ -0.19
FOXA2-202ENST00000419308 RPL37P61927 97 aaKnown RBP13.84□□□□□ -0.19
FOXA2-202ENST00000419308 XP32Q5T750 250 aa13.81□□□□□ -0.2
FOXA2-202ENST00000419308 RBM12B-AS1Q9P1G2 102 aa13.79□□□□□ -0.2
FOXA2-202ENST00000419308 H0YAA0 97 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms