RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 LINC00313P59037 77 aa4.63□□□□□ -1.67
VRK2-203ENST00000417641 SPACA4Q8TDM5 124 aa4.63□□□□□ -1.67
VRK2-203ENST00000417641 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.63□□□□□ -1.67
VRK2-203ENST00000417641 DNAH8Q96JB1 4490 aa4.63□□□□□ -1.67
VRK2-203ENST00000417641 CDK2AP2O75956 126 aa4.62□□□□□ -1.67
VRK2-203ENST00000417641 PLA2G1BP04054 148 aaKnown RBP4.62□□□□□ -1.67
VRK2-203ENST00000417641 Q6ZRN7 208 aaPredicted RBP4.62□□□□□ -1.67
VRK2-203ENST00000417641 ACYP2P14621 99 aa4.62□□□□□ -1.67
VRK2-203ENST00000417641 LCE2CQ5TA81 110 aa4.62□□□□□ -1.67
VRK2-203ENST00000417641 DMAC1Q96GE9 116 aa4.62□□□□□ -1.67
VRK2-203ENST00000417641 ZNF706Q9Y5V0 76 aaPredicted RBP4.61□□□□□ -1.67
VRK2-203ENST00000417641 SPATA8Q6RVD6 105 aa4.6□□□□□ -1.67
VRK2-203ENST00000417641 PRAC1Q96KF2 57 aa4.6□□□□□ -1.67
VRK2-203ENST00000417641 C8orf87E5RJ46 101 aa4.6□□□□□ -1.67
VRK2-203ENST00000417641 ANAPC11Q9NYG5 84 aa4.6□□□□□ -1.67
VRK2-203ENST00000417641 RTL8CO15255 209 aa4.58□□□□□ -1.68
VRK2-203ENST00000417641 ADM2Q7Z4H4 148 aa4.58□□□□□ -1.68
VRK2-203ENST00000417641 UBE2DNLQ8IWF7 75 aa4.58□□□□□ -1.68
VRK2-203ENST00000417641 IGLV5-52A0A0A0MRZ9 124 aa4.58□□□□□ -1.68
VRK2-203ENST00000417641 LCE2AQ5TA79 106 aaPredicted RBP4.58□□□□□ -1.68
VRK2-203ENST00000417641 PSORS1C2Q9UIG4 136 aa4.58□□□□□ -1.68
VRK2-203ENST00000417641 NBDYA0A0U1RRE5 68 aa4.57□□□□□ -1.68
VRK2-203ENST00000417641 CSMD3Q7Z407 3707 aa4.57□□□□□ -1.68
VRK2-203ENST00000417641 FAM229AH3BQW9 127 aa4.56□□□□□ -1.68
VRK2-203ENST00000417641 ZNF861PO60384 105 aa4.56□□□□□ -1.68
VRK2-203ENST00000417641 A0A1B0GU69 56 aa4.55□□□□□ -1.68
VRK2-203ENST00000417641 IGKV2-30P06310 120 aa4.55□□□□□ -1.68
VRK2-203ENST00000417641 PLECQ15149 4684 aaKnown RBP4.54□□□□□ -1.68
VRK2-203ENST00000417641 FBN1P35555 2871 aaKnown RBP4.54□□□□□ -1.68
VRK2-203ENST00000417641 SPINK6Q6UWN8 80 aa4.54□□□□□ -1.68
VRK2-203ENST00000417641 H3BS24 57 aa4.54□□□□□ -1.68
VRK2-203ENST00000417641 DNAH17Q9UFH2 4485 aa4.53□□□□□ -1.68
VRK2-203ENST00000417641 FRAS1Q86XX4 4008 aa4.52□□□□□ -1.69
VRK2-203ENST00000417641 LINC01554Q52M75 96 aa4.52□□□□□ -1.69
VRK2-203ENST00000417641 DNAH7Q8WXX0 4024 aa4.52□□□□□ -1.69
VRK2-203ENST00000417641 VPS13DQ5THJ4 4388 aa4.52□□□□□ -1.69
VRK2-203ENST00000417641 A0A087WTM6 91 aa4.51□□□□□ -1.69
VRK2-203ENST00000417641 MIR22HGQ0VDD5 57 aa4.51□□□□□ -1.69
VRK2-203ENST00000417641 KRTAP16-1A8MUX0 517 aa4.5□□□□□ -1.69
VRK2-203ENST00000417641 LORP23490 312 aaPredicted RBP4.5□□□□□ -1.69
VRK2-203ENST00000417641 UQCR11O14957 56 aa4.5□□□□□ -1.69
VRK2-203ENST00000417641 SSBP3-AS1Q7Z2R9 100 aa4.49□□□□□ -1.69
VRK2-203ENST00000417641 CIRBP-AS1Q8TBR5 109 aa4.49□□□□□ -1.69
VRK2-203ENST00000417641 IGLV7-43P04211 117 aa4.48□□□□□ -1.69
VRK2-203ENST00000417641 NOTCH1P46531 2555 aa4.48□□□□□ -1.69
VRK2-203ENST00000417641 COL7A1Q02388 2944 aa4.48□□□□□ -1.69
VRK2-203ENST00000417641 STAB1Q9NY15 2570 aa4.47□□□□□ -1.69
VRK2-203ENST00000417641 RETNLBQ9BQ08 111 aa4.47□□□□□ -1.69
VRK2-203ENST00000417641 HECTD4Q9Y4D8 3996 aa4.47□□□□□ -1.69
VRK2-203ENST00000417641 NBEAL1Q6ZS30 2694 aa4.45□□□□□ -1.7
VRK2-203ENST00000417641 IGKV2D-30A0A075B6S6 120 aa4.45□□□□□ -1.7
VRK2-203ENST00000417641 COL6A5A8TX70 2615 aa4.44□□□□□ -1.7
VRK2-203ENST00000417641 NUPR2A6NF83 97 aa4.43□□□□□ -1.7
VRK2-203ENST00000417641 CSAG1Q6PB30 78 aa4.43□□□□□ -1.7
VRK2-203ENST00000417641 DNAH2Q9P225 4427 aa4.42□□□□□ -1.7
VRK2-203ENST00000417641 KRTAP13-2Q52LG2 175 aa4.42□□□□□ -1.7
VRK2-203ENST00000417641 STAB2Q8WWQ8 2551 aa4.42□□□□□ -1.7
VRK2-203ENST00000417641 STARD9Q9P2P6 4700 aa4.42□□□□□ -1.7
VRK2-203ENST00000417641 DNAH11Q96DT5 4516 aa4.42□□□□□ -1.7
VRK2-203ENST00000417641 PRKDCP78527 4128 aaKnown RBP4.4□□□□□ -1.71
VRK2-203ENST00000417641 DNAH5Q8TE73 4624 aa4.36□□□□□ -1.71
VRK2-203ENST00000417641 A8MUU9 505 aa4.36□□□□□ -1.71
VRK2-203ENST00000417641 Q6ZSA8 131 aa4.36□□□□□ -1.71
VRK2-203ENST00000417641 H0YAA0 97 aa4.35□□□□□ -1.71
VRK2-203ENST00000417641 LY6G6CO95867 125 aa4.35□□□□□ -1.71
VRK2-203ENST00000417641 KMT2AQ03164 3969 aa4.35□□□□□ -1.71
VRK2-203ENST00000417641 KRTAP1-4P0C5Y4 121 aa4.34□□□□□ -1.71
VRK2-203ENST00000417641 Q8N1X5 172 aa4.33□□□□□ -1.72
VRK2-203ENST00000417641 SPINK1P00995 79 aa4.32□□□□□ -1.72
VRK2-203ENST00000417641 LINC00304Q8N9R0 145 aa4.32□□□□□ -1.72
VRK2-203ENST00000417641 LRP1BQ9NZR2 4599 aa4.32□□□□□ -1.72
VRK2-203ENST00000417641 KRTAP4-8Q9BYQ9 185 aa4.32□□□□□ -1.72
VRK2-203ENST00000417641 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
VRK2-203ENST00000417641 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
VRK2-203ENST00000417641 FBN3Q75N90 2809 aa4.31□□□□□ -1.72
VRK2-203ENST00000417641 MGAM2Q2M2H8 2515 aa4.31□□□□□ -1.72
VRK2-203ENST00000417641 C1orf134Q5TEV5 83 aa4.31□□□□□ -1.72
VRK2-203ENST00000417641 TYMSOSQ8TAI1 123 aa4.3□□□□□ -1.72
VRK2-203ENST00000417641 DNAH6Q9C0G6 4158 aa4.3□□□□□ -1.72
VRK2-203ENST00000417641 KRTAP10-2P60368 255 aa4.29□□□□□ -1.72
VRK2-203ENST00000417641 KRTAP3-1Q9BYR8 98 aa4.28□□□□□ -1.72
VRK2-203ENST00000417641 KRTAP9-2Q9BYQ4 174 aa4.27□□□□□ -1.73
VRK2-203ENST00000417641 SACSQ9NZJ4 4579 aa4.27□□□□□ -1.73
VRK2-203ENST00000417641 KRTAP9-6A0A140TA67 174 aa4.26□□□□□ -1.73
VRK2-203ENST00000417641 A0A1B0GU33 70 aa4.26□□□□□ -1.73
VRK2-203ENST00000417641 H1FX-AS1Q4G0G2 97 aa4.26□□□□□ -1.73
VRK2-203ENST00000417641 KRTAP10-1P60331 282 aa4.25□□□□□ -1.73
VRK2-203ENST00000417641 XP32Q5T750 250 aa4.25□□□□□ -1.73
VRK2-203ENST00000417641 ROMO1P60602 79 aa4.25□□□□□ -1.73
VRK2-203ENST00000417641 MEGF8Q7Z7M0 2845 aa4.24□□□□□ -1.73
VRK2-203ENST00000417641 TGP01266 2768 aa4.24□□□□□ -1.73
VRK2-203ENST00000417641 RPS29P62273 56 aaKnown RBP4.22□□□□□ -1.73
VRK2-203ENST00000417641 C20orf166-AS1Q96NR2 134 aa4.21□□□□□ -1.73
VRK2-203ENST00000417641 VPS13BQ7Z7G8 4022 aa4.21□□□□□ -1.74
VRK2-203ENST00000417641 PKD1P98161 4303 aa4.2□□□□□ -1.74
VRK2-203ENST00000417641 FAT2Q9NYQ8 4349 aa4.19□□□□□ -1.74
VRK2-203ENST00000417641 COX6B2Q6YFQ2 88 aa4.18□□□□□ -1.74
VRK2-203ENST00000417641 PKHD1L1Q86WI1 4243 aa4.17□□□□□ -1.74
VRK2-203ENST00000417641 P0C880 135 aa4.16□□□□□ -1.74
VRK2-203ENST00000417641 CRIPTQ9P021 101 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms