RNA–Protein interactions for RNA: ENST00000415947.1

PARD3B-205, Transcript of par-3 family cell polarity regulator beta, humanhuman

TSL 1 (best)

Gene PARD3B, Length 1,668 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-205ENST00000415947 TNXBP22105 4242 aa13.03□□□□□ -0.32
PARD3B-205ENST00000415947 HCG22E2RYF7 251 aa13.02□□□□□ -0.33
PARD3B-205ENST00000415947 IGHV6-1A0A0B4J1U7 121 aa12.99□□□□□ -0.33
PARD3B-205ENST00000415947 ATOX1O00244 68 aa12.98□□□□□ -0.33
PARD3B-205ENST00000415947 MMP24-AS1A0A0U1RRL7 71 aa12.97□□□□□ -0.33
PARD3B-205ENST00000415947 C8orf17Q9NRJ1 99 aa12.96□□□□□ -0.33
PARD3B-205ENST00000415947 KRTAP29-1A8MX34 341 aaPredicted RBP12.96□□□□□ -0.34
PARD3B-205ENST00000415947 WFDC13Q8IUB5 93 aa12.94□□□□□ -0.34
PARD3B-205ENST00000415947 MYCBP2O75592 4640 aa12.94□□□□□ -0.34
PARD3B-205ENST00000415947 CASC2Q6XLA1 102 aa12.93□□□□□ -0.34
PARD3B-205ENST00000415947 HERC2O95714 4834 aa12.93□□□□□ -0.34
PARD3B-205ENST00000415947 NOTCH2NLQ7Z3S9 236 aa12.92□□□□□ -0.34
PARD3B-205ENST00000415947 C8orf87E5RJ46 101 aa12.91□□□□□ -0.34
PARD3B-205ENST00000415947 ANAPC13Q9BS18 74 aa12.91□□□□□ -0.34
PARD3B-205ENST00000415947 hDV103S1A0JD37 113 aa12.89□□□□□ -0.35
PARD3B-205ENST00000415947 DMBT1Q9UGM3 2413 aaPredicted RBP12.87□□□□□ -0.35
PARD3B-205ENST00000415947 PCP4P48539 62 aa12.87□□□□□ -0.35
PARD3B-205ENST00000415947 RETNLBQ9BQ08 111 aa12.87□□□□□ -0.35
PARD3B-205ENST00000415947 LINC00313P59037 77 aa12.86□□□□□ -0.35
PARD3B-205ENST00000415947 SMIM20Q8N5G0 67 aa12.86□□□□□ -0.35
PARD3B-205ENST00000415947 TMEM254Q8TBM7 123 aa12.83□□□□□ -0.36
PARD3B-205ENST00000415947 OCR1Q9BZK8 76 aa12.83□□□□□ -0.36
PARD3B-205ENST00000415947 SERP2Q8N6R1 65 aa12.81□□□□□ -0.36
PARD3B-205ENST00000415947 TRAV7A0A075B6U4 112 aa12.8□□□□□ -0.36
PARD3B-205ENST00000415947 MRPL34Q9BQ48 92 aaKnown RBP12.8□□□□□ -0.36
PARD3B-205ENST00000415947 ABCA13Q86UQ4 5058 aa12.79□□□□□ -0.36
PARD3B-205ENST00000415947 FP248Q71RG6 208 aaPredicted RBP12.77□□□□□ -0.37
PARD3B-205ENST00000415947 KRTAP16-1A8MUX0 517 aa12.75□□□□□ -0.37
PARD3B-205ENST00000415947 COX7CP15954 63 aa12.74□□□□□ -0.37
PARD3B-205ENST00000415947 J3QL48 77 aa12.7□□□□□ -0.38
PARD3B-205ENST00000415947 UQCRQO14949 82 aa12.69□□□□□ -0.38
PARD3B-205ENST00000415947 Q8N9P0 234 aaPredicted RBP12.69□□□□□ -0.38
PARD3B-205ENST00000415947 TP53AIP1Q9HCN2 124 aa12.68□□□□□ -0.38
PARD3B-205ENST00000415947 NDUFS5O43920 106 aa12.67□□□□□ -0.38
PARD3B-205ENST00000415947 IGLV7-46A0A075B6I9 117 aa12.65□□□□□ -0.38
PARD3B-205ENST00000415947 C9orf92A6NGG3 77 aa12.64□□□□□ -0.39
PARD3B-205ENST00000415947 CCDC179H3BU77 68 aa12.64□□□□□ -0.39
PARD3B-205ENST00000415947 C5orf47Q569G3 176 aa12.61□□□□□ -0.39
PARD3B-205ENST00000415947 PRR4Q16378 134 aa12.57□□□□□ -0.4
PARD3B-205ENST00000415947 C20orf197Q8N268 126 aa12.56□□□□□ -0.4
PARD3B-205ENST00000415947 KRTAP13-3Q3SY46 172 aa12.55□□□□□ -0.4
PARD3B-205ENST00000415947 TRAV22A0A0B4J277 110 aa12.54□□□□□ -0.4
PARD3B-205ENST00000415947 C20orf166-AS1Q96NR2 134 aa12.54□□□□□ -0.4
PARD3B-205ENST00000415947 A8MUU9 505 aa12.52□□□□□ -0.4
PARD3B-205ENST00000415947 H0Y9P7 68 aa12.52□□□□□ -0.4
PARD3B-205ENST00000415947 MP68P56378 58 aa12.52□□□□□ -0.4
PARD3B-205ENST00000415947 A0A0U1RQV1 116 aa12.5□□□□□ -0.41
PARD3B-205ENST00000415947 KLKP1Q107X0 134 aa12.5□□□□□ -0.41
PARD3B-205ENST00000415947 Q5W150 140 aa12.5□□□□□ -0.41
PARD3B-205ENST00000415947 H3BPC8 53 aa12.47□□□□□ -0.41
PARD3B-205ENST00000415947 SNURFQ9Y675 71 aa12.47□□□□□ -0.41
PARD3B-205ENST00000415947 TPRXLQ17RH7 258 aa12.45□□□□□ -0.42
PARD3B-205ENST00000415947 Q75L30 129 aa12.45□□□□□ -0.42
PARD3B-205ENST00000415947 LINC00208Q96KT6 92 aa12.45□□□□□ -0.42
PARD3B-205ENST00000415947 ZCCHC13Q8WW36 166 aaKnown RBP12.43□□□□□ -0.42
PARD3B-205ENST00000415947 CYSTM1Q9H1C7 97 aa12.42□□□□□ -0.42
PARD3B-205ENST00000415947 XP32Q5T750 250 aa12.42□□□□□ -0.42
PARD3B-205ENST00000415947 PCLOQ9Y6V0 5065 aa12.41□□□□□ -0.42
PARD3B-205ENST00000415947 C1orf64Q8NEQ6 169 aa12.41□□□□□ -0.42
PARD3B-205ENST00000415947 RPL37P61927 97 aaKnown RBP12.34□□□□□ -0.43
PARD3B-205ENST00000415947 LOC101927531A0A1B0GV80 90 aa12.33□□□□□ -0.44
PARD3B-205ENST00000415947 NDUFC1O43677 76 aa12.33□□□□□ -0.44
PARD3B-205ENST00000415947 H7BZZ5 65 aa12.31□□□□□ -0.44
PARD3B-205ENST00000415947 IGKV2-30P06310 120 aa12.27□□□□□ -0.45
PARD3B-205ENST00000415947 ATP11AUNQ6ZP68 121 aa12.26□□□□□ -0.45
PARD3B-205ENST00000415947 CYP4F30PQ9H0H9 118 aa12.26□□□□□ -0.45
PARD3B-205ENST00000415947 IGKV2D-30A0A075B6S6 120 aa12.19□□□□□ -0.46
PARD3B-205ENST00000415947 TMEM258P61165 79 aa12.18□□□□□ -0.46
PARD3B-205ENST00000415947 PCOTHQ58A44 107 aa12.17□□□□□ -0.46
PARD3B-205ENST00000415947 C7orf65Q6ZTY9 151 aa12.16□□□□□ -0.46
PARD3B-205ENST00000415947 LPAP08519 4548 aa12.15□□□□□ -0.46
PARD3B-205ENST00000415947 SPINK7P58062 85 aa12.1□□□□□ -0.47
PARD3B-205ENST00000415947 SPANXA2-OT1Q8N9U9 137 aa12.09□□□□□ -0.47
PARD3B-205ENST00000415947 LRP2P98164 4655 aa12.07□□□□□ -0.48
PARD3B-205ENST00000415947 FAM236DA0A1B0GTK5 79 aa12.06□□□□□ -0.48
PARD3B-205ENST00000415947 FAM236CP0DP71 79 aa12.06□□□□□ -0.48
PARD3B-205ENST00000415947 HERC1Q15751 4861 aa12.06□□□□□ -0.48
PARD3B-205ENST00000415947 HRES1P13985 223 aa12.05□□□□□ -0.48
PARD3B-205ENST00000415947 ATP5EP56381 51 aaPredicted RBP12.03□□□□□ -0.48
PARD3B-205ENST00000415947 SEC61BP60468 96 aaKnown RBP12.02□□□□□ -0.49
PARD3B-205ENST00000415947 HMCN2Q8NDA2 5059 aa11.93□□□□□ -0.5
PARD3B-205ENST00000415947 C4orf26Q17RF5 130 aa11.89□□□□□ -0.51
PARD3B-205ENST00000415947 DMAC1Q96GE9 116 aa11.85□□□□□ -0.51
PARD3B-205ENST00000415947 SERP1Q9Y6X1 66 aa11.8□□□□□ -0.52
PARD3B-205ENST00000415947 COX6B2Q6YFQ2 88 aa11.78□□□□□ -0.52
PARD3B-205ENST00000415947 MUC17Q685J3 4493 aa11.78□□□□□ -0.52
PARD3B-205ENST00000415947 A8MUN3 132 aa11.78□□□□□ -0.52
PARD3B-205ENST00000415947 ACYP2P14621 99 aa11.78□□□□□ -0.52
PARD3B-205ENST00000415947 RPS28P62857 69 aaKnown RBP11.76□□□□□ -0.53
PARD3B-205ENST00000415947 KRTAP4-1Q9BYQ7 146 aa11.76□□□□□ -0.53
PARD3B-205ENST00000415947 KRTAP3-1Q9BYR8 98 aa11.76□□□□□ -0.53
PARD3B-205ENST00000415947 MPLKIPQ8TAP9 179 aa11.75□□□□□ -0.53
PARD3B-205ENST00000415947 COA5Q86WW8 74 aa11.7□□□□□ -0.54
PARD3B-205ENST00000415947 RBM12B-AS1Q9P1G2 102 aa11.65□□□□□ -0.54
PARD3B-205ENST00000415947 CHKB-CPT1BH3BT56 60 aa11.55□□□□□ -0.56
PARD3B-205ENST00000415947 H1FX-AS1Q4G0G2 97 aa11.52□□□□□ -0.56
PARD3B-205ENST00000415947 SMIM26A0A096LP01 95 aa11.48□□□□□ -0.57
PARD3B-205ENST00000415947 KRTAP19-2Q3LHN2 52 aa11.46□□□□□ -0.58
PARD3B-205ENST00000415947 MUC2Q02817 5179 aa11.42□□□□□ -0.58
PARD3B-205ENST00000415947 UBR4Q5T4S7 5183 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms