RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 WDFY3Q8IZQ1 3526 aa0.78□□□□□ -2.28
HMGB3P31-201ENST00000413333 MAP1AP78559 2803 aaPredicted RBP0.78□□□□□ -2.28
HMGB3P31-201ENST00000413333 I3L3M4 83 aa0.78□□□□□ -2.28
HMGB3P31-201ENST00000413333 ENHOQ6UWT2 76 aa0.78□□□□□ -2.28
HMGB3P31-201ENST00000413333 ATMQ13315 3056 aa0.78□□□□□ -2.28
HMGB3P31-201ENST00000413333 APC2O95996 2303 aa0.78□□□□□ -2.28
HMGB3P31-201ENST00000413333 CLASP1Q7Z460 1538 aa0.78□□□□□ -2.28
HMGB3P31-201ENST00000413333 HIVEP1P15822 2718 aa0.78□□□□□ -2.29
HMGB3P31-201ENST00000413333 ZZEF1O43149 2961 aa0.78□□□□□ -2.29
HMGB3P31-201ENST00000413333 DMXL2Q8TDJ6 3036 aa0.78□□□□□ -2.29
HMGB3P31-201ENST00000413333 DMXL1Q9Y485 3027 aa0.78□□□□□ -2.29
HMGB3P31-201ENST00000413333 PKDREJQ9NTG1 2253 aa0.77□□□□□ -2.29
HMGB3P31-201ENST00000413333 CSPG4Q6UVK1 2322 aa0.77□□□□□ -2.29
HMGB3P31-201ENST00000413333 MYO15AQ9UKN7 3530 aa0.77□□□□□ -2.29
HMGB3P31-201ENST00000413333 PRH1P02810 166 aa0.77□□□□□ -2.29
HMGB3P31-201ENST00000413333 COX6B1P14854 86 aa0.77□□□□□ -2.29
HMGB3P31-201ENST00000413333 KRTAP20-1Q3LI63 56 aa0.77□□□□□ -2.29
HMGB3P31-201ENST00000413333 SMIM5Q71RC9 77 aa0.77□□□□□ -2.29
HMGB3P31-201ENST00000413333 KCNQ1DNQ9H478 68 aa0.77□□□□□ -2.29
HMGB3P31-201ENST00000413333 TRIOO75962 3097 aa0.77□□□□□ -2.29
HMGB3P31-201ENST00000413333 ALMS1Q8TCU4 4167 aa0.77□□□□□ -2.29
HMGB3P31-201ENST00000413333 CSMD2Q7Z408 3487 aa0.76□□□□□ -2.29
HMGB3P31-201ENST00000413333 C4AP0C0L4 1744 aa0.76□□□□□ -2.29
HMGB3P31-201ENST00000413333 C4BP0C0L5 1744 aa0.76□□□□□ -2.29
HMGB3P31-201ENST00000413333 LINC01549A6NIU2 74 aa0.76□□□□□ -2.29
HMGB3P31-201ENST00000413333 SPRR1AP35321 89 aa0.76□□□□□ -2.29
HMGB3P31-201ENST00000413333 RNF213Q63HN8 5207 aa0.75□□□□□ -2.29
HMGB3P31-201ENST00000413333 SYCP2Q9BX26 1530 aa0.75□□□□□ -2.29
HMGB3P31-201ENST00000413333 CCL22O00626 93 aa0.75□□□□□ -2.29
HMGB3P31-201ENST00000413333 COX6B2Q6YFQ2 88 aa0.75□□□□□ -2.29
HMGB3P31-201ENST00000413333 SMR3AQ99954 134 aa0.75□□□□□ -2.29
HMGB3P31-201ENST00000413333 SSPOA2VEC9 5147 aa0.75□□□□□ -2.29
HMGB3P31-201ENST00000413333 CHD7Q9P2D1 2997 aa0.75□□□□□ -2.29
HMGB3P31-201ENST00000413333 HERC2O95714 4834 aa0.74□□□□□ -2.29
HMGB3P31-201ENST00000413333 SPRR1BP22528 89 aa0.74□□□□□ -2.29
HMGB3P31-201ENST00000413333 UBL5Q9BZL1 73 aa0.74□□□□□ -2.29
HMGB3P31-201ENST00000413333 SRRM2Q9UQ35 2752 aaKnown RBP0.74□□□□□ -2.29
HMGB3P31-201ENST00000413333 PRKDCP78527 4128 aaKnown RBP0.73□□□□□ -2.29
HMGB3P31-201ENST00000413333 DEFB114Q30KQ6 69 aa0.73□□□□□ -2.29
HMGB3P31-201ENST00000413333 KIF21BO75037 1637 aa0.73□□□□□ -2.29
HMGB3P31-201ENST00000413333 DSTQ03001 7570 aaKnown RBP0.73□□□□□ -2.29
HMGB3P31-201ENST00000413333 COL7A1Q02388 2944 aa0.73□□□□□ -2.29
HMGB3P31-201ENST00000413333 KMT2DO14686 5537 aa0.72□□□□□ -2.29
HMGB3P31-201ENST00000413333 SPENQ96T58 3664 aaKnown RBP0.72□□□□□ -2.29
HMGB3P31-201ENST00000413333 MGAQ8IWI9 3026 aa0.72□□□□□ -2.29
HMGB3P31-201ENST00000413333 UGGT1Q9NYU2 1555 aa0.72□□□□□ -2.29
HMGB3P31-201ENST00000413333 DEFB131BA0A096LNP1 70 aa0.72□□□□□ -2.29
HMGB3P31-201ENST00000413333 KRTAP2-3P0C7H8 128 aa0.72□□□□□ -2.29
HMGB3P31-201ENST00000413333 DEFB105AQ8NG35 78 aa0.72□□□□□ -2.29
HMGB3P31-201ENST00000413333 KRTAP2-4Q9BYR9 128 aa0.72□□□□□ -2.29
HMGB3P31-201ENST00000413333 KRTAP2-1Q9BYU5 128 aa0.72□□□□□ -2.29
HMGB3P31-201ENST00000413333 ACACAQ13085 2346 aa0.72□□□□□ -2.29
HMGB3P31-201ENST00000413333 ANKRD36CQ5JPF3 1778 aa0.72□□□□□ -2.29
HMGB3P31-201ENST00000413333 MUC5BQ9HC84 5762 aaPredicted RBP0.72□□□□□ -2.29
HMGB3P31-201ENST00000413333 SVEP1Q4LDE5 3571 aa0.72□□□□□ -2.29
HMGB3P31-201ENST00000413333 HMCN2Q8NDA2 5059 aa0.71□□□□□ -2.3
HMGB3P31-201ENST00000413333 CPS1P31327 1500 aa0.71□□□□□ -2.3
HMGB3P31-201ENST00000413333 LELP1Q5T871 98 aa0.71□□□□□ -2.3
HMGB3P31-201ENST00000413333 SPINK6Q6UWN8 80 aa0.71□□□□□ -2.3
HMGB3P31-201ENST00000413333 ADGRG4Q8IZF6 3080 aa0.7□□□□□ -2.3
HMGB3P31-201ENST00000413333 TACC2O95359 2948 aa0.7□□□□□ -2.3
HMGB3P31-201ENST00000413333 ETDCA0A1B0GVM5 59 aa0.7□□□□□ -2.3
HMGB3P31-201ENST00000413333 NDUFA3O95167 84 aa0.7□□□□□ -2.3
HMGB3P31-201ENST00000413333 H1FX-AS1Q4G0G2 97 aa0.7□□□□□ -2.3
HMGB3P31-201ENST00000413333 FANCD2Q9BXW9 1451 aa0.69□□□□□ -2.3
HMGB3P31-201ENST00000413333 DEPDC5O75140 1603 aa0.69□□□□□ -2.3
HMGB3P31-201ENST00000413333 MRPL33O75394 65 aaKnown RBP0.69□□□□□ -2.3
HMGB3P31-201ENST00000413333 APLNQ9ULZ1 77 aa0.69□□□□□ -2.3
HMGB3P31-201ENST00000413333 WNK2Q9Y3S1 2297 aa0.69□□□□□ -2.3
HMGB3P31-201ENST00000413333 VPS13CQ709C8 3753 aa0.69□□□□□ -2.3
HMGB3P31-201ENST00000413333 CUBNO60494 3623 aa0.69□□□□□ -2.3
HMGB3P31-201ENST00000413333 ADCY10Q96PN6 1610 aa0.68□□□□□ -2.3
HMGB3P31-201ENST00000413333 MDN1Q9NU22 5596 aa0.68□□□□□ -2.3
HMGB3P31-201ENST00000413333 CDKN2A-AS1Q9UH64 79 aa0.68□□□□□ -2.3
HMGB3P31-201ENST00000413333 FAT2Q9NYQ8 4349 aa0.68□□□□□ -2.3
HMGB3P31-201ENST00000413333 LAMA1P25391 3075 aa0.68□□□□□ -2.3
HMGB3P31-201ENST00000413333 A0A1B0GUL6 1792 aa0.68□□□□□ -2.3
HMGB3P31-201ENST00000413333 H0YAA0 97 aa0.67□□□□□ -2.3
HMGB3P31-201ENST00000413333 CRIP1P50238 77 aa0.67□□□□□ -2.3
HMGB3P31-201ENST00000413333 EFCAB6Q5THR3 1501 aa0.67□□□□□ -2.3
HMGB3P31-201ENST00000413333 NRXN3Q9Y4C0 1643 aa0.67□□□□□ -2.3
HMGB3P31-201ENST00000413333 TOGARAM1Q9Y4F4 1720 aa0.67□□□□□ -2.3
HMGB3P31-201ENST00000413333 KLK9Q2XQG4 91 aa0.66□□□□□ -2.3
HMGB3P31-201ENST00000413333 PRO3102Q9H379 93 aa0.66□□□□□ -2.3
HMGB3P31-201ENST00000413333 DMDP11532 3685 aa0.66□□□□□ -2.3
HMGB3P31-201ENST00000413333 K7EMI3 77 aa0.65□□□□□ -2.31
HMGB3P31-201ENST00000413333 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
HMGB3P31-201ENST00000413333 KMT2AQ03164 3969 aa0.64□□□□□ -2.31
HMGB3P31-201ENST00000413333 KIAA0586Q9BVV6 1533 aa0.64□□□□□ -2.31
HMGB3P31-201ENST00000413333 LAMA5O15230 3695 aa0.64□□□□□ -2.31
HMGB3P31-201ENST00000413333 IGIPA6NJ69 53 aa0.64□□□□□ -2.31
HMGB3P31-201ENST00000413333 LYNX1G3V0Z9 82 aa0.64□□□□□ -2.31
HMGB3P31-201ENST00000413333 WFDC13Q8IUB5 93 aa0.64□□□□□ -2.31
HMGB3P31-201ENST00000413333 TNXBP22105 4242 aa0.64□□□□□ -2.31
HMGB3P31-201ENST00000413333 MUC5ACP98088 5654 aa0.64□□□□□ -2.31
HMGB3P31-201ENST00000413333 M0R1W7 72 aa0.63□□□□□ -2.31
HMGB3P31-201ENST00000413333 FCER1GP30273 86 aa0.63□□□□□ -2.31
HMGB3P31-201ENST00000413333 LINC00158P58513 81 aa0.63□□□□□ -2.31
HMGB3P31-201ENST00000413333 DEFB109BQ30KR1 87 aa0.63□□□□□ -2.31
HMGB3P31-201ENST00000413333 FXYD6Q9H0Q3 95 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms