RNA–Protein interactions for RNA: ENST00000412923.6

PCDH18-202, Transcript of protocadherin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH18, Length 5,102 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-202ENST00000412923 K7EIL1 84 aa3.59□□□□□ -1.84
PCDH18-202ENST00000412923 Q6ZSA8 131 aa3.59□□□□□ -1.84
PCDH18-202ENST00000412923 MGAM2Q2M2H8 2515 aa3.59□□□□□ -1.84
PCDH18-202ENST00000412923 TNP1P09430 55 aa3.58□□□□□ -1.84
PCDH18-202ENST00000412923 FLG2Q5D862 2391 aaPredicted RBP3.57□□□□□ -1.84
PCDH18-202ENST00000412923 ZNF292O60281 2723 aa3.57□□□□□ -1.84
PCDH18-202ENST00000412923 WWC2-AS2Q96NR7 200 aa3.56□□□□□ -1.84
PCDH18-202ENST00000412923 HELZ2Q9BYK8 2649 aaKnown RBP3.56□□□□□ -1.84
PCDH18-202ENST00000412923 USP24Q9UPU5 2620 aa3.56□□□□□ -1.84
PCDH18-202ENST00000412923 NIPBLQ6KC79 2804 aaeCLIP3.55□□□□□ -1.84
PCDH18-202ENST00000412923 MAST4O15021 2626 aa3.55□□□□□ -1.84
PCDH18-202ENST00000412923 H0YAA0 97 aa3.55□□□□□ -1.84
PCDH18-202ENST00000412923 ZANQ9Y493 2812 aa3.55□□□□□ -1.84
PCDH18-202ENST00000412923 ITPR1Q14643 2758 aa3.55□□□□□ -1.84
PCDH18-202ENST00000412923 UTP20O75691 2785 aaKnown RBP3.54□□□□□ -1.84
PCDH18-202ENST00000412923 ATRQ13535 2644 aa3.54□□□□□ -1.84
PCDH18-202ENST00000412923 FBN2P35556 2912 aa3.52□□□□□ -1.85
PCDH18-202ENST00000412923 NF1P21359 2839 aa3.49□□□□□ -1.85
PCDH18-202ENST00000412923 CFAP46Q8IYW2 2715 aa3.48□□□□□ -1.85
PCDH18-202ENST00000412923 RPS29P62273 56 aaKnown RBP3.48□□□□□ -1.85
PCDH18-202ENST00000412923 FLNAP21333 2647 aaKnown RBP3.48□□□□□ -1.85
PCDH18-202ENST00000412923 NBEAL2Q6ZNJ1 2754 aa3.47□□□□□ -1.85
PCDH18-202ENST00000412923 SETXQ7Z333 2677 aaKnown RBP3.47□□□□□ -1.85
PCDH18-202ENST00000412923 FLNCQ14315 2725 aa3.47□□□□□ -1.85
PCDH18-202ENST00000412923 ITPR3Q14573 2671 aa3.47□□□□□ -1.85
PCDH18-202ENST00000412923 KRTAP10-11P60412 298 aa3.47□□□□□ -1.85
PCDH18-202ENST00000412923 KRTAP15-1Q3LI76 137 aa3.47□□□□□ -1.85
PCDH18-202ENST00000412923 MXRA5Q9NR99 2828 aa3.46□□□□□ -1.86
PCDH18-202ENST00000412923 AKAP9Q99996 3911 aa3.46□□□□□ -1.86
PCDH18-202ENST00000412923 CHD6Q8TD26 2715 aa3.46□□□□□ -1.86
PCDH18-202ENST00000412923 KRTAP1-3Q8IUG1 177 aa3.45□□□□□ -1.86
PCDH18-202ENST00000412923 KRTAP10-3P60369 221 aa3.44□□□□□ -1.86
PCDH18-202ENST00000412923 TEP1Q99973 2627 aaKnown RBP3.43□□□□□ -1.86
PCDH18-202ENST00000412923 KRTAP1-1Q07627 177 aa3.43□□□□□ -1.86
PCDH18-202ENST00000412923 KRTAP10-8P60410 259 aa3.41□□□□□ -1.86
PCDH18-202ENST00000412923 TEX15Q9BXT5 2789 aa3.41□□□□□ -1.86
PCDH18-202ENST00000412923 APCP25054 2843 aa3.4□□□□□ -1.86
PCDH18-202ENST00000412923 NBPF19A0A087WUL8 3843 aa3.4□□□□□ -1.87
PCDH18-202ENST00000412923 GCN1Q92616 2671 aaKnown RBP3.39□□□□□ -1.87
PCDH18-202ENST00000412923 Q6ZRN7 208 aaPredicted RBP3.39□□□□□ -1.87
PCDH18-202ENST00000412923 BAHCC1Q9P281 2608 aa3.39□□□□□ -1.87
PCDH18-202ENST00000412923 STAB1Q9NY15 2570 aa3.38□□□□□ -1.87
PCDH18-202ENST00000412923 KRTAP3-3Q9BYR6 98 aa3.38□□□□□ -1.87
PCDH18-202ENST00000412923 KRTAP3-2Q9BYR7 98 aa3.38□□□□□ -1.87
PCDH18-202ENST00000412923 TPRXLQ17RH7 258 aa3.37□□□□□ -1.87
PCDH18-202ENST00000412923 SMR3BP02814 79 aaPredicted RBP3.36□□□□□ -1.87
PCDH18-202ENST00000412923 Q5VSD8 79 aa3.36□□□□□ -1.87
PCDH18-202ENST00000412923 COL6A5A8TX70 2615 aa3.35□□□□□ -1.87
PCDH18-202ENST00000412923 ZNF469Q96JG9 3925 aaPredicted RBP3.34□□□□□ -1.87
PCDH18-202ENST00000412923 LCE2BO14633 110 aa3.33□□□□□ -1.88
PCDH18-202ENST00000412923 PDZD2O15018 2839 aa3.33□□□□□ -1.88
PCDH18-202ENST00000412923 UNC79Q9P2D8 2635 aa3.33□□□□□ -1.88
PCDH18-202ENST00000412923 LCE2AQ5TA79 106 aaPredicted RBP3.32□□□□□ -1.88
PCDH18-202ENST00000412923 IGSF10Q6WRI0 2623 aa3.3□□□□□ -1.88
PCDH18-202ENST00000412923 VWFP04275 2813 aa3.29□□□□□ -1.88
PCDH18-202ENST00000412923 KRTAP13-1Q8IUC0 172 aa3.29□□□□□ -1.88
PCDH18-202ENST00000412923 NOTCH1P46531 2555 aa3.27□□□□□ -1.89
PCDH18-202ENST00000412923 KRTAP13-4Q3LI77 160 aa3.27□□□□□ -1.89
PCDH18-202ENST00000412923 PKD1L1Q8TDX9 2849 aa3.27□□□□□ -1.89
PCDH18-202ENST00000412923 UBR5O95071 2799 aaPredicted RBP3.26□□□□□ -1.89
PCDH18-202ENST00000412923 HIVEP1P15822 2718 aa3.26□□□□□ -1.89
PCDH18-202ENST00000412923 M0R2T5 61 aa3.25□□□□□ -1.89
PCDH18-202ENST00000412923 NBEAL1Q6ZS30 2694 aa3.25□□□□□ -1.89
PCDH18-202ENST00000412923 KRTAP13-3Q3SY46 172 aa3.23□□□□□ -1.89
PCDH18-202ENST00000412923 DMBT1Q9UGM3 2413 aaPredicted RBP3.23□□□□□ -1.89
PCDH18-202ENST00000412923 KRTAP13-2Q52LG2 175 aa3.23□□□□□ -1.89
PCDH18-202ENST00000412923 ITPR2Q14571 2701 aa3.22□□□□□ -1.89
PCDH18-202ENST00000412923 LCE2CQ5TA81 110 aa3.2□□□□□ -1.9
PCDH18-202ENST00000412923 TENM1Q9UKZ4 2725 aa3.2□□□□□ -1.9
PCDH18-202ENST00000412923 XP32Q5T750 250 aa3.19□□□□□ -1.9
PCDH18-202ENST00000412923 KRTAP7-1Q8IUC3 87 aa3.19□□□□□ -1.9
PCDH18-202ENST00000412923 TRRAPQ9Y4A5 3859 aa3.19□□□□□ -1.9
PCDH18-202ENST00000412923 KRTAP12-2P59991 146 aa3.19□□□□□ -1.9
PCDH18-202ENST00000412923 CSMD3Q7Z407 3707 aa3.19□□□□□ -1.9
PCDH18-202ENST00000412923 FBN1P35555 2871 aaKnown RBP3.17□□□□□ -1.9
PCDH18-202ENST00000412923 NSD1Q96L73 2696 aaPredicted RBP3.17□□□□□ -1.9
PCDH18-202ENST00000412923 SRRM2Q9UQ35 2752 aaKnown RBP3.16□□□□□ -1.9
PCDH18-202ENST00000412923 KRTAP12-1P59990 96 aa3.16□□□□□ -1.9
PCDH18-202ENST00000412923 OTOGQ6ZRI0 2925 aa3.16□□□□□ -1.9
PCDH18-202ENST00000412923 STAB2Q8WWQ8 2551 aa3.16□□□□□ -1.9
PCDH18-202ENST00000412923 COL7A1Q02388 2944 aa3.14□□□□□ -1.91
PCDH18-202ENST00000412923 KRTAP1-5Q9BYS1 174 aa3.13□□□□□ -1.91
PCDH18-202ENST00000412923 TENM4Q6N022 2769 aa3.12□□□□□ -1.91
PCDH18-202ENST00000412923 KRTAP21-3Q3LHN1 58 aa3.12□□□□□ -1.91
PCDH18-202ENST00000412923 TENM3Q9P273 2699 aa3.12□□□□□ -1.91
PCDH18-202ENST00000412923 KRTAP10-1P60331 282 aa3.11□□□□□ -1.91
PCDH18-202ENST00000412923 KRTAP10-2P60368 255 aa3.11□□□□□ -1.91
PCDH18-202ENST00000412923 TENM2Q9NT68 2774 aa3.08□□□□□ -1.92
PCDH18-202ENST00000412923 KMT2BQ9UMN6 2715 aaPredicted RBP3.05□□□□□ -1.92
PCDH18-202ENST00000412923 ANK3Q12955 4377 aaKnown RBP3.04□□□□□ -1.92
PCDH18-202ENST00000412923 ANK2Q01484 3957 aa3.02□□□□□ -1.93
PCDH18-202ENST00000412923 LORP23490 312 aaPredicted RBP3□□□□□ -1.93
PCDH18-202ENST00000412923 LYSTQ99698 3801 aa3□□□□□ -1.93
PCDH18-202ENST00000412923 DNAH10Q8IVF4 4471 aa2.96□□□□□ -1.93
PCDH18-202ENST00000412923 KRTAP10-6P60371 365 aaPredicted RBP2.96□□□□□ -1.94
PCDH18-202ENST00000412923 KRTAP1-4P0C5Y4 121 aa2.89□□□□□ -1.95
PCDH18-202ENST00000412923 KRTAP3-1Q9BYR8 98 aa2.88□□□□□ -1.95
PCDH18-202ENST00000412923 DNAH9Q9NYC9 4486 aa2.86□□□□□ -1.95
PCDH18-202ENST00000412923 TGP01266 2768 aa2.85□□□□□ -1.95
PCDH18-202ENST00000412923 DNAH7Q8WXX0 4024 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms