RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 LINC00483Q53H64 154 aa8.26□□□□□ -1.09
CLTCL1-201ENST00000412649 HIVEP1P15822 2718 aa8.26□□□□□ -1.09
CLTCL1-201ENST00000412649 NIPBLQ6KC79 2804 aaeCLIP8.24□□□□□ -1.09
CLTCL1-201ENST00000412649 PLAC8Q9NZF1 115 aa8.23□□□□□ -1.09
CLTCL1-201ENST00000412649 TYMSOSQ8TAI1 123 aa8.23□□□□□ -1.09
CLTCL1-201ENST00000412649 PANO1I0J062 215 aa8.2□□□□□ -1.1
CLTCL1-201ENST00000412649 A0A1B0GU33 70 aa8.19□□□□□ -1.1
CLTCL1-201ENST00000412649 NSD1Q96L73 2696 aaPredicted RBP8.17□□□□□ -1.1
CLTCL1-201ENST00000412649 CUBNO60494 3623 aa8.16□□□□□ -1.1
CLTCL1-201ENST00000412649 ITPR2Q14571 2701 aa8.15□□□□□ -1.1
CLTCL1-201ENST00000412649 STAB1Q9NY15 2570 aa8.14□□□□□ -1.11
CLTCL1-201ENST00000412649 KRTAP13-1Q8IUC0 172 aa8.14□□□□□ -1.11
CLTCL1-201ENST00000412649 BSNQ9UPA5 3926 aa8.09□□□□□ -1.11
CLTCL1-201ENST00000412649 CRIPTQ9P021 101 aa8.06□□□□□ -1.12
CLTCL1-201ENST00000412649 C9orf92A6NGG3 77 aa8.04□□□□□ -1.12
CLTCL1-201ENST00000412649 LINC00304Q8N9R0 145 aa8.04□□□□□ -1.12
CLTCL1-201ENST00000412649 KRTAP25-1Q3LHN0 102 aa8.03□□□□□ -1.12
CLTCL1-201ENST00000412649 A0A0D9SG42 100 aa8□□□□□ -1.13
CLTCL1-201ENST00000412649 TENM3Q9P273 2699 aa7.98□□□□□ -1.13
CLTCL1-201ENST00000412649 H1FX-AS1Q4G0G2 97 aa7.97□□□□□ -1.13
CLTCL1-201ENST00000412649 STAB2Q8WWQ8 2551 aa7.96□□□□□ -1.14
CLTCL1-201ENST00000412649 J3QL48 77 aa7.94□□□□□ -1.14
CLTCL1-201ENST00000412649 KMT2BQ9UMN6 2715 aaPredicted RBP7.94□□□□□ -1.14
CLTCL1-201ENST00000412649 VWFP04275 2813 aa7.94□□□□□ -1.14
CLTCL1-201ENST00000412649 ROMO1P60602 79 aa7.92□□□□□ -1.14
CLTCL1-201ENST00000412649 FLG2Q5D862 2391 aaPredicted RBP7.92□□□□□ -1.14
CLTCL1-201ENST00000412649 Q6ZRN7 208 aaPredicted RBP7.92□□□□□ -1.14
CLTCL1-201ENST00000412649 CSMD2Q7Z408 3487 aa7.86□□□□□ -1.15
CLTCL1-201ENST00000412649 ZFHX3Q15911 3703 aa7.85□□□□□ -1.15
CLTCL1-201ENST00000412649 TENM1Q9UKZ4 2725 aa7.85□□□□□ -1.15
CLTCL1-201ENST00000412649 KRTAP13-3Q3SY46 172 aa7.85□□□□□ -1.15
CLTCL1-201ENST00000412649 RPL37P61927 97 aaKnown RBP7.85□□□□□ -1.15
CLTCL1-201ENST00000412649 DMBT1Q9UGM3 2413 aaPredicted RBP7.84□□□□□ -1.15
CLTCL1-201ENST00000412649 PKD1L1Q8TDX9 2849 aa7.82□□□□□ -1.16
CLTCL1-201ENST00000412649 PDZD2O15018 2839 aa7.8□□□□□ -1.16
CLTCL1-201ENST00000412649 A8MUU9 505 aa7.8□□□□□ -1.16
CLTCL1-201ENST00000412649 Q6ZSA8 131 aa7.8□□□□□ -1.16
CLTCL1-201ENST00000412649 KRTAP13-2Q52LG2 175 aa7.78□□□□□ -1.16
CLTCL1-201ENST00000412649 VPS13CQ709C8 3753 aa7.75□□□□□ -1.17
CLTCL1-201ENST00000412649 H0YAA0 97 aa7.75□□□□□ -1.17
CLTCL1-201ENST00000412649 SMR3BP02814 79 aaPredicted RBP7.72□□□□□ -1.17
CLTCL1-201ENST00000412649 SRRM2Q9UQ35 2752 aaKnown RBP7.72□□□□□ -1.17
CLTCL1-201ENST00000412649 KRTAP10-2P60368 255 aa7.71□□□□□ -1.18
CLTCL1-201ENST00000412649 COX6B2Q6YFQ2 88 aa7.69□□□□□ -1.18
CLTCL1-201ENST00000412649 KRTAP16-1A8MUX0 517 aa7.67□□□□□ -1.18
CLTCL1-201ENST00000412649 TGP01266 2768 aa7.67□□□□□ -1.18
CLTCL1-201ENST00000412649 KRTAP10-1P60331 282 aa7.67□□□□□ -1.18
CLTCL1-201ENST00000412649 NDUFAF8A1L188 74 aa7.65□□□□□ -1.19
CLTCL1-201ENST00000412649 S4R3F8 94 aa7.63□□□□□ -1.19
CLTCL1-201ENST00000412649 TENM4Q6N022 2769 aa7.58□□□□□ -1.2
CLTCL1-201ENST00000412649 RPS29P62273 56 aaKnown RBP7.56□□□□□ -1.2
CLTCL1-201ENST00000412649 LUZP6Q538Z0 58 aa7.55□□□□□ -1.2
CLTCL1-201ENST00000412649 FBN1P35555 2871 aaKnown RBP7.53□□□□□ -1.2
CLTCL1-201ENST00000412649 KRTAP21-3Q3LHN1 58 aa7.52□□□□□ -1.21
CLTCL1-201ENST00000412649 ANK3Q12955 4377 aaKnown RBP7.5□□□□□ -1.21
CLTCL1-201ENST00000412649 KRTAP1-4P0C5Y4 121 aa7.48□□□□□ -1.21
CLTCL1-201ENST00000412649 NBPF19A0A087WUL8 3843 aa7.48□□□□□ -1.21
CLTCL1-201ENST00000412649 C20orf166-AS1Q96NR2 134 aa7.48□□□□□ -1.21
CLTCL1-201ENST00000412649 OTOGQ6ZRI0 2925 aa7.48□□□□□ -1.21
CLTCL1-201ENST00000412649 C10orf95Q9H7T3 257 aa7.45□□□□□ -1.22
CLTCL1-201ENST00000412649 TRRAPQ9Y4A5 3859 aa7.45□□□□□ -1.22
CLTCL1-201ENST00000412649 AKAP9Q99996 3911 aa7.43□□□□□ -1.22
CLTCL1-201ENST00000412649 TENM2Q9NT68 2774 aa7.42□□□□□ -1.22
CLTCL1-201ENST00000412649 A0A0A0MQY5 61 aa7.41□□□□□ -1.22
CLTCL1-201ENST00000412649 R4GN34 69 aa7.34□□□□□ -1.24
CLTCL1-201ENST00000412649 ZNF469Q96JG9 3925 aaPredicted RBP7.33□□□□□ -1.24
CLTCL1-201ENST00000412649 P0C880 135 aa7.32□□□□□ -1.24
CLTCL1-201ENST00000412649 M0QZ58 72 aa7.3□□□□□ -1.24
CLTCL1-201ENST00000412649 COL7A1Q02388 2944 aa7.28□□□□□ -1.24
CLTCL1-201ENST00000412649 CAMK2N1Q7Z7J9 78 aa7.28□□□□□ -1.24
CLTCL1-201ENST00000412649 Q5VSD8 79 aa7.28□□□□□ -1.24
CLTCL1-201ENST00000412649 KRTAP3-1Q9BYR8 98 aa7.25□□□□□ -1.25
CLTCL1-201ENST00000412649 FBN3Q75N90 2809 aa7.25□□□□□ -1.25
CLTCL1-201ENST00000412649 TPRXLQ17RH7 258 aa7.25□□□□□ -1.25
CLTCL1-201ENST00000412649 M0R2T5 61 aa7.15□□□□□ -1.27
CLTCL1-201ENST00000412649 MEGF8Q7Z7M0 2845 aa7.15□□□□□ -1.27
CLTCL1-201ENST00000412649 SEC61BP60468 96 aaKnown RBP7.14□□□□□ -1.27
CLTCL1-201ENST00000412649 PLAC4Q8WY50 150 aa7.12□□□□□ -1.27
CLTCL1-201ENST00000412649 CSMD3Q7Z407 3707 aa7.1□□□□□ -1.27
CLTCL1-201ENST00000412649 KRTAP12-2P59991 146 aa7.08□□□□□ -1.28
CLTCL1-201ENST00000412649 KRTAP13-4Q3LI77 160 aa7.07□□□□□ -1.28
CLTCL1-201ENST00000412649 KRTAP10-6P60371 365 aaPredicted RBP7.05□□□□□ -1.28
CLTCL1-201ENST00000412649 KRTAP15-1Q3LI76 137 aa7.03□□□□□ -1.28
CLTCL1-201ENST00000412649 HUWE1Q7Z6Z7 4374 aaKnown RBP7.02□□□□□ -1.29
CLTCL1-201ENST00000412649 XP32Q5T750 250 aa7.01□□□□□ -1.29
CLTCL1-201ENST00000412649 KRTAP12-1P59990 96 aa6.99□□□□□ -1.29
CLTCL1-201ENST00000412649 ALMS1Q8TCU4 4167 aa6.98□□□□□ -1.29
CLTCL1-201ENST00000412649 DNAH10Q8IVF4 4471 aa6.95□□□□□ -1.3
CLTCL1-201ENST00000412649 PP632Q6XCG6 107 aa6.93□□□□□ -1.3
CLTCL1-201ENST00000412649 KRTAP10-8P60410 259 aa6.91□□□□□ -1.3
CLTCL1-201ENST00000412649 KRTAP3-2Q9BYR7 98 aa6.89□□□□□ -1.31
CLTCL1-201ENST00000412649 KRTAP3-3Q9BYR6 98 aa6.85□□□□□ -1.31
CLTCL1-201ENST00000412649 TNP1P09430 55 aa6.77□□□□□ -1.33
CLTCL1-201ENST00000412649 DNAH8Q96JB1 4490 aa6.72□□□□□ -1.33
CLTCL1-201ENST00000412649 DNAH1Q9P2D7 4330 aa6.71□□□□□ -1.34
CLTCL1-201ENST00000412649 PLECQ15149 4684 aaKnown RBP6.67□□□□□ -1.34
CLTCL1-201ENST00000412649 DNAH9Q9NYC9 4486 aa6.66□□□□□ -1.34
CLTCL1-201ENST00000412649 A0A1B0GVY2 172 aa6.6□□□□□ -1.35
CLTCL1-201ENST00000412649 DNAH17Q9UFH2 4485 aa6.6□□□□□ -1.35
CLTCL1-201ENST00000412649 DNAH3Q8TD57 4116 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 264.8 ms