RNA–Protein interactions for RNA: ENST00000411850.5

TOM1-204, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TOM1, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-204ENST00000411850 TGP01266 2768 aa9.99□□□□□ -0.81
TOM1-204ENST00000411850 CD164Q04900 197 aa9.99□□□□□ -0.81
TOM1-204ENST00000411850 Q8N9P0 234 aaPredicted RBP9.99□□□□□ -0.81
TOM1-204ENST00000411850 A8MUN3 132 aa9.98□□□□□ -0.81
TOM1-204ENST00000411850 PCOTHQ58A44 107 aa9.98□□□□□ -0.81
TOM1-204ENST00000411850 COA5Q86WW8 74 aa9.97□□□□□ -0.81
TOM1-204ENST00000411850 A0A087X002 238 aa9.97□□□□□ -0.81
TOM1-204ENST00000411850 NOTCH2NLQ7Z3S9 236 aa9.97□□□□□ -0.81
TOM1-204ENST00000411850 LIMD2Q9BT23 127 aa9.97□□□□□ -0.81
TOM1-204ENST00000411850 Q5VV11 94 aa9.94□□□□□ -0.82
TOM1-204ENST00000411850 ALMS1Q8TCU4 4167 aa9.93□□□□□ -0.82
TOM1-204ENST00000411850 FRAS1Q86XX4 4008 aa9.91□□□□□ -0.82
TOM1-204ENST00000411850 SSBP3-AS1Q7Z2R9 100 aa9.9□□□□□ -0.82
TOM1-204ENST00000411850 SEC61GP60059 68 aa9.9□□□□□ -0.82
TOM1-204ENST00000411850 CIRBP-AS1Q8TBR5 109 aa9.9□□□□□ -0.82
TOM1-204ENST00000411850 SPINK6Q6UWN8 80 aa9.89□□□□□ -0.83
TOM1-204ENST00000411850 LOC101927531A0A1B0GV80 90 aa9.87□□□□□ -0.83
TOM1-204ENST00000411850 PRR15LQ9BU68 103 aa9.86□□□□□ -0.83
TOM1-204ENST00000411850 KRTAP13-3Q3SY46 172 aa9.86□□□□□ -0.83
TOM1-204ENST00000411850 C8orf87E5RJ46 101 aa9.85□□□□□ -0.83
TOM1-204ENST00000411850 Q5W150 140 aa9.83□□□□□ -0.84
TOM1-204ENST00000411850 DNAH11Q96DT5 4516 aa9.83□□□□□ -0.84
TOM1-204ENST00000411850 CHKB-CPT1BH3BT56 60 aa9.82□□□□□ -0.84
TOM1-204ENST00000411850 HRES1P13985 223 aa9.82□□□□□ -0.84
TOM1-204ENST00000411850 KRTAP10-2P60368 255 aa9.82□□□□□ -0.84
TOM1-204ENST00000411850 Q75L30 129 aa9.82□□□□□ -0.84
TOM1-204ENST00000411850 HYDINQ4G0P3 5121 aa9.8□□□□□ -0.84
TOM1-204ENST00000411850 DNAH5Q8TE73 4624 aa9.79□□□□□ -0.84
TOM1-204ENST00000411850 LINC01558Q9Y6Z2 57 aa9.79□□□□□ -0.84
TOM1-204ENST00000411850 Q6ZSA8 131 aa9.75□□□□□ -0.85
TOM1-204ENST00000411850 PKD1P98161 4303 aa9.75□□□□□ -0.85
TOM1-204ENST00000411850 KRTAP13-2Q52LG2 175 aa9.75□□□□□ -0.85
TOM1-204ENST00000411850 SPAG11AQ6PDA7 123 aa9.75□□□□□ -0.85
TOM1-204ENST00000411850 FAT2Q9NYQ8 4349 aa9.75□□□□□ -0.85
TOM1-204ENST00000411850 A8MU10 97 aa9.74□□□□□ -0.85
TOM1-204ENST00000411850 LINC00313P59037 77 aa9.74□□□□□ -0.85
TOM1-204ENST00000411850 KRTAP10-1P60331 282 aa9.7□□□□□ -0.86
TOM1-204ENST00000411850 FAM229AH3BQW9 127 aa9.7□□□□□ -0.86
TOM1-204ENST00000411850 A6NED7 52 aa9.69□□□□□ -0.86
TOM1-204ENST00000411850 LCA10Q71F78 164 aa9.68□□□□□ -0.86
TOM1-204ENST00000411850 ACYP2P14621 99 aa9.67□□□□□ -0.86
TOM1-204ENST00000411850 PMAIP1Q13794 54 aa9.66□□□□□ -0.86
TOM1-204ENST00000411850 SACSQ9NZJ4 4579 aa9.66□□□□□ -0.86
TOM1-204ENST00000411850 KRTAP1-4P0C5Y4 121 aa9.65□□□□□ -0.87
TOM1-204ENST00000411850 KRTAP16-1A8MUX0 517 aa9.64□□□□□ -0.87
TOM1-204ENST00000411850 DMAC1Q96GE9 116 aa9.64□□□□□ -0.87
TOM1-204ENST00000411850 CDC42SE1Q9NRR8 79 aa9.63□□□□□ -0.87
TOM1-204ENST00000411850 LRP1BQ9NZR2 4599 aa9.63□□□□□ -0.87
TOM1-204ENST00000411850 IGKV2-30P06310 120 aa9.63□□□□□ -0.87
TOM1-204ENST00000411850 ATP11AUNQ6ZP68 121 aa9.63□□□□□ -0.87
TOM1-204ENST00000411850 PRR26Q8N8Z3 221 aa9.63□□□□□ -0.87
TOM1-204ENST00000411850 RETNLBQ9BQ08 111 aa9.58□□□□□ -0.88
TOM1-204ENST00000411850 SPTSSBQ8NFR3 76 aa9.56□□□□□ -0.88
TOM1-204ENST00000411850 SPINK7P58062 85 aa9.56□□□□□ -0.88
TOM1-204ENST00000411850 PLA2G1BP04054 148 aaKnown RBP9.52□□□□□ -0.88
TOM1-204ENST00000411850 C4orf48Q5BLP8 95 aa9.52□□□□□ -0.89
TOM1-204ENST00000411850 SPINK1P00995 79 aa9.51□□□□□ -0.89
TOM1-204ENST00000411850 TYMSOSQ8TAI1 123 aa9.51□□□□□ -0.89
TOM1-204ENST00000411850 A6NN06 94 aa9.48□□□□□ -0.89
TOM1-204ENST00000411850 PKHD1P08F94 4074 aa9.48□□□□□ -0.89
TOM1-204ENST00000411850 VPS13BQ7Z7G8 4022 aa9.46□□□□□ -0.89
TOM1-204ENST00000411850 A0A1B0GVY2 172 aa9.46□□□□□ -0.9
TOM1-204ENST00000411850 IGKV2D-30A0A075B6S6 120 aa9.45□□□□□ -0.9
TOM1-204ENST00000411850 KTN1-AS1Q86SY8 53 aa9.44□□□□□ -0.9
TOM1-204ENST00000411850 RYR2Q92736 4967 aa9.42□□□□□ -0.9
TOM1-204ENST00000411850 RPS29P62273 56 aaKnown RBP9.41□□□□□ -0.9
TOM1-204ENST00000411850 DYNC1H1Q14204 4646 aaKnown RBP9.41□□□□□ -0.9
TOM1-204ENST00000411850 A0A1B0GU69 56 aa9.39□□□□□ -0.91
TOM1-204ENST00000411850 LINC00304Q8N9R0 145 aa9.38□□□□□ -0.91
TOM1-204ENST00000411850 C7orf65Q6ZTY9 151 aa9.37□□□□□ -0.91
TOM1-204ENST00000411850 KMT2CQ8NEZ4 4911 aaKnown RBP9.34□□□□□ -0.91
TOM1-204ENST00000411850 APOBP04114 4563 aaKnown RBP9.3□□□□□ -0.92
TOM1-204ENST00000411850 SMR3BP02814 79 aaPredicted RBP9.29□□□□□ -0.92
TOM1-204ENST00000411850 SPATA8Q6RVD6 105 aa9.29□□□□□ -0.92
TOM1-204ENST00000411850 UQCR11O14957 56 aa9.24□□□□□ -0.93
TOM1-204ENST00000411850 KRTAP10-4P60372 401 aaPredicted RBP9.24□□□□□ -0.93
TOM1-204ENST00000411850 MIR22HGQ0VDD5 57 aa9.21□□□□□ -0.93
TOM1-204ENST00000411850 Q8N1X5 172 aa9.21□□□□□ -0.93
TOM1-204ENST00000411850 A8MUU9 505 aa9.21□□□□□ -0.94
TOM1-204ENST00000411850 C20orf166-AS1Q96NR2 134 aa9.21□□□□□ -0.94
TOM1-204ENST00000411850 FAT1Q14517 4588 aa9.2□□□□□ -0.94
TOM1-204ENST00000411850 RBM12B-AS1Q9P1G2 102 aa9.19□□□□□ -0.94
TOM1-204ENST00000411850 C9orf92A6NGG3 77 aa9.15□□□□□ -0.94
TOM1-204ENST00000411850 PKHD1L1Q86WI1 4243 aa9.14□□□□□ -0.95
TOM1-204ENST00000411850 RYR3Q15413 4870 aa9.1□□□□□ -0.95
TOM1-204ENST00000411850 KRTAP3-1Q9BYR8 98 aa9.06□□□□□ -0.96
TOM1-204ENST00000411850 HSPG2P98160 4391 aa9□□□□□ -0.97
TOM1-204ENST00000411850 PRAC1Q96KF2 57 aa8.98□□□□□ -0.97
TOM1-204ENST00000411850 ADM2Q7Z4H4 148 aa8.97□□□□□ -0.97
TOM1-204ENST00000411850 Q5VSD8 79 aa8.96□□□□□ -0.98
TOM1-204ENST00000411850 RYR1P21817 5038 aa8.94□□□□□ -0.98
TOM1-204ENST00000411850 COX6B2Q6YFQ2 88 aa8.92□□□□□ -0.98
TOM1-204ENST00000411850 H0YAA0 97 aa8.91□□□□□ -0.98
TOM1-204ENST00000411850 FLG2Q5D862 2391 aaPredicted RBP8.9□□□□□ -0.99
TOM1-204ENST00000411850 A0A1B0GU33 70 aa8.89□□□□□ -0.99
TOM1-204ENST00000411850 KRTAP10-8P60410 259 aa8.88□□□□□ -0.99
TOM1-204ENST00000411850 KRTAP17-1Q9BYP8 105 aa8.87□□□□□ -0.99
TOM1-204ENST00000411850 H1FX-AS1Q4G0G2 97 aa8.86□□□□□ -0.99
TOM1-204ENST00000411850 TNXBP22105 4242 aa8.85□□□□□ -0.99
TOM1-204ENST00000411850 LRP1Q07954 4544 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms