RNA–Protein interactions for RNA: ENST00000409785.8

KCMF1-201, Transcript of potassium channel modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCMF1, Length 7,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1-201ENST00000409785 Q5XG85 94 aa9.55□□□□□ -0.88
KCMF1-201ENST00000409785 SPRR1BP22528 89 aa9.52□□□□□ -0.88
KCMF1-201ENST00000409785 A0A1B0GVY2 172 aa9.52□□□□□ -0.89
KCMF1-201ENST00000409785 NOTCH2NLQ7Z3S9 236 aa9.52□□□□□ -0.89
KCMF1-201ENST00000409785 NOTCH1P46531 2555 aa9.51□□□□□ -0.89
KCMF1-201ENST00000409785 C10orf95Q9H7T3 257 aa9.47□□□□□ -0.89
KCMF1-201ENST00000409785 STAB2Q8WWQ8 2551 aa9.44□□□□□ -0.9
KCMF1-201ENST00000409785 TACC2O95359 2948 aa9.43□□□□□ -0.9
KCMF1-201ENST00000409785 UTP20O75691 2785 aaKnown RBP9.43□□□□□ -0.9
KCMF1-201ENST00000409785 DMXL1Q9Y485 3027 aa9.41□□□□□ -0.9
KCMF1-201ENST00000409785 NSD1Q96L73 2696 aaPredicted RBP9.38□□□□□ -0.91
KCMF1-201ENST00000409785 RELNP78509 3460 aa9.37□□□□□ -0.91
KCMF1-201ENST00000409785 TNRC18O15417 2968 aaPredicted RBP9.37□□□□□ -0.91
KCMF1-201ENST00000409785 KRTAP11-1Q8IUC1 163 aa9.37□□□□□ -0.91
KCMF1-201ENST00000409785 KRTAP10-8P60410 259 aa9.36□□□□□ -0.91
KCMF1-201ENST00000409785 CSMD1Q96PZ7 3565 aa9.35□□□□□ -0.91
KCMF1-201ENST00000409785 KRTAP16-1A8MUX0 517 aa9.33□□□□□ -0.92
KCMF1-201ENST00000409785 ZFHX4Q86UP3 3567 aa9.32□□□□□ -0.92
KCMF1-201ENST00000409785 IGSF10Q6WRI0 2623 aa9.31□□□□□ -0.92
KCMF1-201ENST00000409785 NBEAQ8NFP9 2946 aa9.29□□□□□ -0.92
KCMF1-201ENST00000409785 TNP1P09430 55 aa9.28□□□□□ -0.92
KCMF1-201ENST00000409785 SPENQ96T58 3664 aaKnown RBP9.26□□□□□ -0.93
KCMF1-201ENST00000409785 UBR5O95071 2799 aaPredicted RBP9.26□□□□□ -0.93
KCMF1-201ENST00000409785 NDUFAF8A1L188 74 aa9.24□□□□□ -0.93
KCMF1-201ENST00000409785 HIVEP1P15822 2718 aa9.24□□□□□ -0.93
KCMF1-201ENST00000409785 ITPR1Q14643 2758 aa9.2□□□□□ -0.94
KCMF1-201ENST00000409785 KRTAP25-1Q3LHN0 102 aa9.2□□□□□ -0.94
KCMF1-201ENST00000409785 DMDP11532 3685 aa9.19□□□□□ -0.94
KCMF1-201ENST00000409785 CELSR2Q9HCU4 2923 aa9.17□□□□□ -0.94
KCMF1-201ENST00000409785 KRTAP4-16G5E9R7 235 aaPredicted RBP9.16□□□□□ -0.94
KCMF1-201ENST00000409785 KRTAP13-2Q52LG2 175 aa9.13□□□□□ -0.95
KCMF1-201ENST00000409785 KRTAP29-1A8MX34 341 aaPredicted RBP9.09□□□□□ -0.95
KCMF1-201ENST00000409785 CELSR1Q9NYQ6 3014 aa9.08□□□□□ -0.96
KCMF1-201ENST00000409785 KRTAP10-10P60014 251 aa9.07□□□□□ -0.96
KCMF1-201ENST00000409785 SMG1Q96Q15 3661 aaKnown RBP9.04□□□□□ -0.96
KCMF1-201ENST00000409785 ZFHX3Q15911 3703 aa9.04□□□□□ -0.96
KCMF1-201ENST00000409785 Q6ZRN7 208 aaPredicted RBP9.02□□□□□ -0.97
KCMF1-201ENST00000409785 TENM1Q9UKZ4 2725 aa8.96□□□□□ -0.98
KCMF1-201ENST00000409785 RPS29P62273 56 aaKnown RBP8.95□□□□□ -0.98
KCMF1-201ENST00000409785 CUBNO60494 3623 aa8.95□□□□□ -0.98
KCMF1-201ENST00000409785 KRTAP7-1Q8IUC3 87 aa8.95□□□□□ -0.98
KCMF1-201ENST00000409785 FLNCQ14315 2725 aa8.94□□□□□ -0.98
KCMF1-201ENST00000409785 P0C880 135 aa8.94□□□□□ -0.98
KCMF1-201ENST00000409785 DCHS2Q6V1P9 2916 aa8.93□□□□□ -0.98
KCMF1-201ENST00000409785 ASB16-AS1Q495Z4 193 aa8.93□□□□□ -0.98
KCMF1-201ENST00000409785 SVEP1Q4LDE5 3571 aa8.87□□□□□ -0.99
KCMF1-201ENST00000409785 FBN2P35556 2912 aa8.84□□□□□ -0.99
KCMF1-201ENST00000409785 A6NN06 94 aa8.83□□□□□ -1
KCMF1-201ENST00000409785 XP32Q5T750 250 aa8.81□□□□□ -1
KCMF1-201ENST00000409785 NIPBLQ6KC79 2804 aaeCLIP8.79□□□□□ -1
KCMF1-201ENST00000409785 PRO2289Q9P1D8 64 aa8.78□□□□□ -1
KCMF1-201ENST00000409785 NF1P21359 2839 aa8.78□□□□□ -1
KCMF1-201ENST00000409785 TENM4Q6N022 2769 aa8.75□□□□□ -1.01
KCMF1-201ENST00000409785 KRTAP13-1Q8IUC0 172 aa8.72□□□□□ -1.01
KCMF1-201ENST00000409785 KRTAP21-3Q3LHN1 58 aa8.68□□□□□ -1.02
KCMF1-201ENST00000409785 ZANQ9Y493 2812 aa8.67□□□□□ -1.02
KCMF1-201ENST00000409785 PKD1L1Q8TDX9 2849 aa8.66□□□□□ -1.02
KCMF1-201ENST00000409785 MUC3AQ02505 3323 aa8.65□□□□□ -1.02
KCMF1-201ENST00000409785 CSMD2Q7Z408 3487 aa8.64□□□□□ -1.03
KCMF1-201ENST00000409785 VWFP04275 2813 aa8.63□□□□□ -1.03
KCMF1-201ENST00000409785 HRNRQ86YZ3 2850 aaPredicted RBP8.57□□□□□ -1.04
KCMF1-201ENST00000409785 H0YAA0 97 aa8.56□□□□□ -1.04
KCMF1-201ENST00000409785 PP632Q6XCG6 107 aa8.55□□□□□ -1.04
KCMF1-201ENST00000409785 VPS13CQ709C8 3753 aa8.5□□□□□ -1.05
KCMF1-201ENST00000409785 TPRXLQ17RH7 258 aa8.49□□□□□ -1.05
KCMF1-201ENST00000409785 TENM2Q9NT68 2774 aa8.49□□□□□ -1.05
KCMF1-201ENST00000409785 KRTAP1-4P0C5Y4 121 aa8.46□□□□□ -1.05
KCMF1-201ENST00000409785 BSNQ9UPA5 3926 aa8.46□□□□□ -1.05
KCMF1-201ENST00000409785 MXRA5Q9NR99 2828 aa8.42□□□□□ -1.06
KCMF1-201ENST00000409785 TENM3Q9P273 2699 aa8.39□□□□□ -1.07
KCMF1-201ENST00000409785 PDZD2O15018 2839 aa8.34□□□□□ -1.07
KCMF1-201ENST00000409785 CRCT1Q9UGL9 99 aa8.34□□□□□ -1.08
KCMF1-201ENST00000409785 KRTAP13-3Q3SY46 172 aa8.33□□□□□ -1.08
KCMF1-201ENST00000409785 TRRAPQ9Y4A5 3859 aa8.32□□□□□ -1.08
KCMF1-201ENST00000409785 TGP01266 2768 aa8.3□□□□□ -1.08
KCMF1-201ENST00000409785 KRTAP12-2P59991 146 aa8.29□□□□□ -1.08
KCMF1-201ENST00000409785 CSMD3Q7Z407 3707 aa8.27□□□□□ -1.09
KCMF1-201ENST00000409785 COL7A1Q02388 2944 aa8.14□□□□□ -1.11
KCMF1-201ENST00000409785 KRTAP15-1Q3LI76 137 aa8.13□□□□□ -1.11
KCMF1-201ENST00000409785 MEGF8Q7Z7M0 2845 aa8.08□□□□□ -1.12
KCMF1-201ENST00000409785 AKAP9Q99996 3911 aa8.01□□□□□ -1.13
KCMF1-201ENST00000409785 FBN1P35555 2871 aaKnown RBP8□□□□□ -1.13
KCMF1-201ENST00000409785 KRTAP13-4Q3LI77 160 aa7.93□□□□□ -1.14
KCMF1-201ENST00000409785 ZNF469Q96JG9 3925 aaPredicted RBP7.92□□□□□ -1.14
KCMF1-201ENST00000409785 SRRM2Q9UQ35 2752 aaKnown RBP7.92□□□□□ -1.14
KCMF1-201ENST00000409785 KRTAP12-1P59990 96 aa7.86□□□□□ -1.15
KCMF1-201ENST00000409785 ANK3Q12955 4377 aaKnown RBP7.81□□□□□ -1.16
KCMF1-201ENST00000409785 FBN3Q75N90 2809 aa7.75□□□□□ -1.17
KCMF1-201ENST00000409785 OTOGQ6ZRI0 2925 aa7.67□□□□□ -1.18
KCMF1-201ENST00000409785 HUWE1Q7Z6Z7 4374 aaKnown RBP7.58□□□□□ -1.2
KCMF1-201ENST00000409785 KRTAP10-12P60413 245 aa7.56□□□□□ -1.2
KCMF1-201ENST00000409785 KRTAP3-1Q9BYR8 98 aa7.54□□□□□ -1.2
KCMF1-201ENST00000409785 KRTAP4-5Q9BYR2 181 aa7.47□□□□□ -1.21
KCMF1-201ENST00000409785 LORP23490 312 aaPredicted RBP7.46□□□□□ -1.21
KCMF1-201ENST00000409785 FRAS1Q86XX4 4008 aa7.44□□□□□ -1.22
KCMF1-201ENST00000409785 KRTAP10-5P60370 271 aa7.34□□□□□ -1.23
KCMF1-201ENST00000409785 KRTAP10-6P60371 365 aaPredicted RBP7.28□□□□□ -1.24
KCMF1-201ENST00000409785 ALMS1Q8TCU4 4167 aa7.28□□□□□ -1.24
KCMF1-201ENST00000409785 LCE3AQ5TA76 89 aa7.25□□□□□ -1.25
KCMF1-201ENST00000409785 KRTAP12-3P60328 96 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms