RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 C14orf177Q52M58 125 aa9.34□□□□□ -0.91
LIMS2-205ENST00000409455 IGLV9-49A0A0B4J1Y8 123 aa9.34□□□□□ -0.91
LIMS2-205ENST00000409455 SPINK7P58062 85 aa9.34□□□□□ -0.91
LIMS2-205ENST00000409455 WWC2-AS2Q96NR7 200 aa9.34□□□□□ -0.91
LIMS2-205ENST00000409455 IGHV6-1A0A0B4J1U7 121 aa9.33□□□□□ -0.92
LIMS2-205ENST00000409455 A0A1B0GVX0 72 aa9.32□□□□□ -0.92
LIMS2-205ENST00000409455 CDK2AP2O75956 126 aa9.31□□□□□ -0.92
LIMS2-205ENST00000409455 LY6G6CO95867 125 aa9.31□□□□□ -0.92
LIMS2-205ENST00000409455 MRPL34Q9BQ48 92 aaKnown RBP9.3□□□□□ -0.92
LIMS2-205ENST00000409455 KRTAP13-1Q8IUC0 172 aa9.29□□□□□ -0.92
LIMS2-205ENST00000409455 DNAH2Q9P225 4427 aa9.27□□□□□ -0.93
LIMS2-205ENST00000409455 A0A087WTM6 91 aa9.26□□□□□ -0.93
LIMS2-205ENST00000409455 C1orf134Q5TEV5 83 aa9.23□□□□□ -0.93
LIMS2-205ENST00000409455 LINC00483Q53H64 154 aa9.21□□□□□ -0.94
LIMS2-205ENST00000409455 PRR26Q8N8Z3 221 aa9.21□□□□□ -0.94
LIMS2-205ENST00000409455 A0A087X002 238 aa9.19□□□□□ -0.94
LIMS2-205ENST00000409455 PANO1I0J062 215 aa9.19□□□□□ -0.94
LIMS2-205ENST00000409455 NOTCH2NLQ7Z3S9 236 aa9.19□□□□□ -0.94
LIMS2-205ENST00000409455 ZNF706Q9Y5V0 76 aaPredicted RBP9.19□□□□□ -0.94
LIMS2-205ENST00000409455 ACYP2P14621 99 aa9.17□□□□□ -0.94
LIMS2-205ENST00000409455 HECTD4Q9Y4D8 3996 aa9.15□□□□□ -0.94
LIMS2-205ENST00000409455 RTL8CO15255 209 aa9.15□□□□□ -0.94
LIMS2-205ENST00000409455 LINC00313P59037 77 aa9.14□□□□□ -0.95
LIMS2-205ENST00000409455 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.14□□□□□ -0.95
LIMS2-205ENST00000409455 HYDINQ4G0P3 5121 aa9.13□□□□□ -0.95
LIMS2-205ENST00000409455 Q5W150 140 aa9.13□□□□□ -0.95
LIMS2-205ENST00000409455 DNAH17Q9UFH2 4485 aa9.13□□□□□ -0.95
LIMS2-205ENST00000409455 DNAH6Q9C0G6 4158 aa9.12□□□□□ -0.95
LIMS2-205ENST00000409455 KRTAP13-3Q3SY46 172 aa9.11□□□□□ -0.95
LIMS2-205ENST00000409455 SPACA4Q8TDM5 124 aa9.11□□□□□ -0.95
LIMS2-205ENST00000409455 ALMS1Q8TCU4 4167 aa9.11□□□□□ -0.95
LIMS2-205ENST00000409455 IGLV5-52A0A0A0MRZ9 124 aa9.1□□□□□ -0.95
LIMS2-205ENST00000409455 SPINK6Q6UWN8 80 aa9.09□□□□□ -0.95
LIMS2-205ENST00000409455 DMAC1Q96GE9 116 aa9.07□□□□□ -0.96
LIMS2-205ENST00000409455 ANAPC11Q9NYG5 84 aa9.07□□□□□ -0.96
LIMS2-205ENST00000409455 A0A1B0GU69 56 aa9.07□□□□□ -0.96
LIMS2-205ENST00000409455 PRAC1Q96KF2 57 aa9.06□□□□□ -0.96
LIMS2-205ENST00000409455 FRAS1Q86XX4 4008 aa9.06□□□□□ -0.96
LIMS2-205ENST00000409455 C8orf87E5RJ46 101 aa9.05□□□□□ -0.96
LIMS2-205ENST00000409455 KRTAP10-2P60368 255 aa9.05□□□□□ -0.96
LIMS2-205ENST00000409455 PLA2G1BP04054 148 aaKnown RBP9.04□□□□□ -0.96
LIMS2-205ENST00000409455 PSORS1C2Q9UIG4 136 aa9.04□□□□□ -0.96
LIMS2-205ENST00000409455 ZNF861PO60384 105 aa9.02□□□□□ -0.97
LIMS2-205ENST00000409455 DNAH11Q96DT5 4516 aa9.01□□□□□ -0.97
LIMS2-205ENST00000409455 FAT2Q9NYQ8 4349 aa9□□□□□ -0.97
LIMS2-205ENST00000409455 SPATA8Q6RVD6 105 aa9□□□□□ -0.97
LIMS2-205ENST00000409455 ADM2Q7Z4H4 148 aa9□□□□□ -0.97
LIMS2-205ENST00000409455 SACSQ9NZJ4 4579 aa8.99□□□□□ -0.97
LIMS2-205ENST00000409455 DNAH5Q8TE73 4624 aa8.98□□□□□ -0.97
LIMS2-205ENST00000409455 FAM229AH3BQW9 127 aa8.97□□□□□ -0.97
LIMS2-205ENST00000409455 CIRBP-AS1Q8TBR5 109 aa8.97□□□□□ -0.97
LIMS2-205ENST00000409455 DNAH8Q96JB1 4490 aa8.97□□□□□ -0.97
LIMS2-205ENST00000409455 MIR22HGQ0VDD5 57 aa8.96□□□□□ -0.98
LIMS2-205ENST00000409455 UQCR11O14957 56 aa8.95□□□□□ -0.98
LIMS2-205ENST00000409455 PKD1P98161 4303 aa8.95□□□□□ -0.98
LIMS2-205ENST00000409455 LINC01554Q52M75 96 aa8.95□□□□□ -0.98
LIMS2-205ENST00000409455 KRTAP10-1P60331 282 aa8.92□□□□□ -0.98
LIMS2-205ENST00000409455 IGKV2-30P06310 120 aa8.91□□□□□ -0.98
LIMS2-205ENST00000409455 RETNLBQ9BQ08 111 aa8.91□□□□□ -0.98
LIMS2-205ENST00000409455 Q6ZSA8 131 aa8.88□□□□□ -0.99
LIMS2-205ENST00000409455 SSBP3-AS1Q7Z2R9 100 aa8.86□□□□□ -0.99
LIMS2-205ENST00000409455 IGLV7-43P04211 117 aa8.85□□□□□ -0.99
LIMS2-205ENST00000409455 C4orf48Q5BLP8 95 aa8.84□□□□□ -0.99
LIMS2-205ENST00000409455 KMT2CQ8NEZ4 4911 aaKnown RBP8.82□□□□□ -1
LIMS2-205ENST00000409455 PKHD1P08F94 4074 aa8.82□□□□□ -1
LIMS2-205ENST00000409455 LRP1BQ9NZR2 4599 aa8.81□□□□□ -1
LIMS2-205ENST00000409455 IGKV2D-30A0A075B6S6 120 aa8.79□□□□□ -1
LIMS2-205ENST00000409455 RYR2Q92736 4967 aa8.77□□□□□ -1
LIMS2-205ENST00000409455 CSAG1Q6PB30 78 aa8.77□□□□□ -1.01
LIMS2-205ENST00000409455 A0A1B0GVY2 172 aa8.75□□□□□ -1.01
LIMS2-205ENST00000409455 KRTAP16-1A8MUX0 517 aa8.75□□□□□ -1.01
LIMS2-205ENST00000409455 VPS13BQ7Z7G8 4022 aa8.7□□□□□ -1.02
LIMS2-205ENST00000409455 DYNC1H1Q14204 4646 aaKnown RBP8.68□□□□□ -1.02
LIMS2-205ENST00000409455 SPINK1P00995 79 aa8.66□□□□□ -1.02
LIMS2-205ENST00000409455 KRTAP13-2Q52LG2 175 aa8.65□□□□□ -1.02
LIMS2-205ENST00000409455 H3BS24 57 aa8.64□□□□□ -1.03
LIMS2-205ENST00000409455 SMR3BP02814 79 aaPredicted RBP8.62□□□□□ -1.03
LIMS2-205ENST00000409455 Q8N1X5 172 aa8.59□□□□□ -1.03
LIMS2-205ENST00000409455 RYR3Q15413 4870 aa8.59□□□□□ -1.03
LIMS2-205ENST00000409455 APOBP04114 4563 aaKnown RBP8.58□□□□□ -1.04
LIMS2-205ENST00000409455 KRTAP1-4P0C5Y4 121 aa8.56□□□□□ -1.04
LIMS2-205ENST00000409455 FAT1Q14517 4588 aa8.55□□□□□ -1.04
LIMS2-205ENST00000409455 A8MUU9 505 aa8.54□□□□□ -1.04
LIMS2-205ENST00000409455 H0YAA0 97 aa8.53□□□□□ -1.04
LIMS2-205ENST00000409455 KRTAP25-1Q3LHN0 102 aa8.49□□□□□ -1.05
LIMS2-205ENST00000409455 KRTAP10-4P60372 401 aaPredicted RBP8.48□□□□□ -1.05
LIMS2-205ENST00000409455 LINC00304Q8N9R0 145 aa8.47□□□□□ -1.05
LIMS2-205ENST00000409455 TYMSOSQ8TAI1 123 aa8.46□□□□□ -1.06
LIMS2-205ENST00000409455 A0A1B0GU33 70 aa8.45□□□□□ -1.06
LIMS2-205ENST00000409455 H1FX-AS1Q4G0G2 97 aa8.4□□□□□ -1.07
LIMS2-205ENST00000409455 ROMO1P60602 79 aa8.39□□□□□ -1.07
LIMS2-205ENST00000409455 HSPG2P98160 4391 aa8.37□□□□□ -1.07
LIMS2-205ENST00000409455 K7ERS5 55 aa8.35□□□□□ -1.07
LIMS2-205ENST00000409455 Q5VSD8 79 aa8.31□□□□□ -1.08
LIMS2-205ENST00000409455 RYR1P21817 5038 aa8.3□□□□□ -1.08
LIMS2-205ENST00000409455 RPS29P62273 56 aaKnown RBP8.3□□□□□ -1.08
LIMS2-205ENST00000409455 KRTAP17-1Q9BYP8 105 aa8.3□□□□□ -1.08
LIMS2-205ENST00000409455 KRTAP3-1Q9BYR8 98 aa8.3□□□□□ -1.08
LIMS2-205ENST00000409455 EPPK1P58107 5090 aaKnown RBP8.29□□□□□ -1.08
LIMS2-205ENST00000409455 KIAA1109Q2LD37 5005 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms