RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 DNAH7Q8WXX0 4024 aa4.98□□□□□ -1.61
SNX13-201ENST00000409076 A0A1B0GW54 56 aa4.98□□□□□ -1.61
SNX13-201ENST00000409076 RBM12B-AS1Q9P1G2 102 aa4.97□□□□□ -1.61
SNX13-201ENST00000409076 Q8N1X5 172 aa4.97□□□□□ -1.61
SNX13-201ENST00000409076 LOC101927531A0A1B0GV80 90 aa4.96□□□□□ -1.61
SNX13-201ENST00000409076 ZNF861PO60384 105 aa4.96□□□□□ -1.61
SNX13-201ENST00000409076 C4orf48Q5BLP8 95 aa4.96□□□□□ -1.61
SNX13-201ENST00000409076 ZNF706Q9Y5V0 76 aaPredicted RBP4.96□□□□□ -1.61
SNX13-201ENST00000409076 PLECQ15149 4684 aaKnown RBP4.96□□□□□ -1.61
SNX13-201ENST00000409076 C9orf92A6NGG3 77 aa4.95□□□□□ -1.62
SNX13-201ENST00000409076 WWC2-AS2Q96NR7 200 aa4.95□□□□□ -1.62
SNX13-201ENST00000409076 KTN1-AS1Q86SY8 53 aa4.94□□□□□ -1.62
SNX13-201ENST00000409076 FRAS1Q86XX4 4008 aa4.94□□□□□ -1.62
SNX13-201ENST00000409076 LINC00313P59037 77 aa4.94□□□□□ -1.62
SNX13-201ENST00000409076 KRTAP10-2P60368 255 aa4.93□□□□□ -1.62
SNX13-201ENST00000409076 C7orf65Q6ZTY9 151 aa4.93□□□□□ -1.62
SNX13-201ENST00000409076 ADM2Q7Z4H4 148 aa4.93□□□□□ -1.62
SNX13-201ENST00000409076 IGLV7-46A0A075B6I9 117 aa4.93□□□□□ -1.62
SNX13-201ENST00000409076 A0A1B0GU69 56 aa4.93□□□□□ -1.62
SNX13-201ENST00000409076 Q96NJ1 140 aa4.92□□□□□ -1.62
SNX13-201ENST00000409076 TP53AIP1Q9HCN2 124 aa4.92□□□□□ -1.62
SNX13-201ENST00000409076 IGLV7-43P04211 117 aa4.91□□□□□ -1.62
SNX13-201ENST00000409076 CMYA5Q8N3K9 4069 aa4.91□□□□□ -1.62
SNX13-201ENST00000409076 ATP11AUNQ6ZP68 121 aa4.9□□□□□ -1.63
SNX13-201ENST00000409076 H3BPC8 53 aa4.89□□□□□ -1.63
SNX13-201ENST00000409076 SPANXA2-OT1Q8N9U9 137 aa4.89□□□□□ -1.63
SNX13-201ENST00000409076 Q6ZRN7 208 aaPredicted RBP4.89□□□□□ -1.63
SNX13-201ENST00000409076 SPRR1BP22528 89 aa4.88□□□□□ -1.63
SNX13-201ENST00000409076 PLA2G1BP04054 148 aaKnown RBP4.88□□□□□ -1.63
SNX13-201ENST00000409076 ACYP2P14621 99 aa4.88□□□□□ -1.63
SNX13-201ENST00000409076 CRIPTQ9P021 101 aa4.88□□□□□ -1.63
SNX13-201ENST00000409076 KMT2AQ03164 3969 aa4.88□□□□□ -1.63
SNX13-201ENST00000409076 Q75L30 129 aa4.87□□□□□ -1.63
SNX13-201ENST00000409076 STARD9Q9P2P6 4700 aa4.86□□□□□ -1.63
SNX13-201ENST00000409076 CDC42SE1Q9NRR8 79 aa4.86□□□□□ -1.63
SNX13-201ENST00000409076 A6NN06 94 aa4.85□□□□□ -1.63
SNX13-201ENST00000409076 KRTAP13-1Q8IUC0 172 aa4.85□□□□□ -1.63
SNX13-201ENST00000409076 TYMSOSQ8TAI1 123 aa4.85□□□□□ -1.63
SNX13-201ENST00000409076 Q6ZR54 194 aa4.84□□□□□ -1.63
SNX13-201ENST00000409076 KRTAP10-1P60331 282 aa4.83□□□□□ -1.64
SNX13-201ENST00000409076 DNAH11Q96DT5 4516 aa4.82□□□□□ -1.64
SNX13-201ENST00000409076 DNAH8Q96JB1 4490 aa4.82□□□□□ -1.64
SNX13-201ENST00000409076 LINC01558Q9Y6Z2 57 aa4.82□□□□□ -1.64
SNX13-201ENST00000409076 PRKDCP78527 4128 aaKnown RBP4.8□□□□□ -1.64
SNX13-201ENST00000409076 PLAC8Q9NZF1 115 aa4.8□□□□□ -1.64
SNX13-201ENST00000409076 MIR22HGQ0VDD5 57 aa4.8□□□□□ -1.64
SNX13-201ENST00000409076 FAM229AH3BQW9 127 aa4.79□□□□□ -1.64
SNX13-201ENST00000409076 DNAH1Q9P2D7 4330 aa4.79□□□□□ -1.64
SNX13-201ENST00000409076 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
SNX13-201ENST00000409076 LINC00483Q53H64 154 aa4.77□□□□□ -1.65
SNX13-201ENST00000409076 DNHD1Q96M86 4753 aa4.76□□□□□ -1.65
SNX13-201ENST00000409076 DNAH6Q9C0G6 4158 aa4.75□□□□□ -1.65
SNX13-201ENST00000409076 SSBP3-AS1Q7Z2R9 100 aa4.75□□□□□ -1.65
SNX13-201ENST00000409076 DNAH17Q9UFH2 4485 aa4.74□□□□□ -1.65
SNX13-201ENST00000409076 C8orf87E5RJ46 101 aa4.74□□□□□ -1.65
SNX13-201ENST00000409076 UQCR11O14957 56 aa4.74□□□□□ -1.65
SNX13-201ENST00000409076 A0A0D9SG42 100 aa4.73□□□□□ -1.65
SNX13-201ENST00000409076 CSAG1Q6PB30 78 aa4.73□□□□□ -1.65
SNX13-201ENST00000409076 LINC00304Q8N9R0 145 aa4.71□□□□□ -1.66
SNX13-201ENST00000409076 SPATA8Q6RVD6 105 aa4.71□□□□□ -1.66
SNX13-201ENST00000409076 VPS13DQ5THJ4 4388 aa4.69□□□□□ -1.66
SNX13-201ENST00000409076 DMAC1Q96GE9 116 aa4.69□□□□□ -1.66
SNX13-201ENST00000409076 DNAH2Q9P225 4427 aa4.68□□□□□ -1.66
SNX13-201ENST00000409076 LRP1BQ9NZR2 4599 aa4.68□□□□□ -1.66
SNX13-201ENST00000409076 DNAH3Q8TD57 4116 aa4.67□□□□□ -1.66
SNX13-201ENST00000409076 H3BS24 57 aa4.67□□□□□ -1.66
SNX13-201ENST00000409076 LINC01554Q52M75 96 aa4.67□□□□□ -1.66
SNX13-201ENST00000409076 ASB16-AS1Q495Z4 193 aa4.66□□□□□ -1.66
SNX13-201ENST00000409076 HECTD4Q9Y4D8 3996 aa4.65□□□□□ -1.66
SNX13-201ENST00000409076 FAT1Q14517 4588 aa4.64□□□□□ -1.67
SNX13-201ENST00000409076 HYDINQ4G0P3 5121 aa4.63□□□□□ -1.67
SNX13-201ENST00000409076 KRTAP13-3Q3SY46 172 aa4.61□□□□□ -1.67
SNX13-201ENST00000409076 KRTAP1-4P0C5Y4 121 aa4.6□□□□□ -1.67
SNX13-201ENST00000409076 MYCBP2O75592 4640 aa4.6□□□□□ -1.67
SNX13-201ENST00000409076 A0A1B0GU33 70 aa4.58□□□□□ -1.68
SNX13-201ENST00000409076 KRTAP16-1A8MUX0 517 aa4.57□□□□□ -1.68
SNX13-201ENST00000409076 VPS13BQ7Z7G8 4022 aa4.56□□□□□ -1.68
SNX13-201ENST00000409076 DNAH5Q8TE73 4624 aa4.56□□□□□ -1.68
SNX13-201ENST00000409076 K7ERS5 55 aa4.55□□□□□ -1.68
SNX13-201ENST00000409076 PKHD1P08F94 4074 aa4.54□□□□□ -1.68
SNX13-201ENST00000409076 Q6ZSA8 131 aa4.53□□□□□ -1.68
SNX13-201ENST00000409076 SPINT4Q6UDR6 99 aa4.53□□□□□ -1.68
SNX13-201ENST00000409076 FAT2Q9NYQ8 4349 aa4.52□□□□□ -1.69
SNX13-201ENST00000409076 H0YAA0 97 aa4.51□□□□□ -1.69
SNX13-201ENST00000409076 ALMS1Q8TCU4 4167 aa4.51□□□□□ -1.69
SNX13-201ENST00000409076 C10orf95Q9H7T3 257 aa4.47□□□□□ -1.69
SNX13-201ENST00000409076 DYNC2H1Q8NCM8 4307 aaKnown RBP4.47□□□□□ -1.69
SNX13-201ENST00000409076 H1FX-AS1Q4G0G2 97 aa4.47□□□□□ -1.69
SNX13-201ENST00000409076 FAT3Q8TDW7 4589 aa4.46□□□□□ -1.7
SNX13-201ENST00000409076 LRP1Q07954 4544 aaKnown RBP4.46□□□□□ -1.7
SNX13-201ENST00000409076 DYNC1H1Q14204 4646 aaKnown RBP4.45□□□□□ -1.7
SNX13-201ENST00000409076 COX6B2Q6YFQ2 88 aa4.44□□□□□ -1.7
SNX13-201ENST00000409076 KRTAP3-1Q9BYR8 98 aa4.44□□□□□ -1.7
SNX13-201ENST00000409076 Q5VSD8 79 aa4.39□□□□□ -1.71
SNX13-201ENST00000409076 KRTAP25-1Q3LHN0 102 aa4.38□□□□□ -1.71
SNX13-201ENST00000409076 A8MUU9 505 aa4.38□□□□□ -1.71
SNX13-201ENST00000409076 S4R3F8 94 aa4.36□□□□□ -1.71
SNX13-201ENST00000409076 P0C880 135 aa4.36□□□□□ -1.71
SNX13-201ENST00000409076 ROMO1P60602 79 aa4.36□□□□□ -1.71
SNX13-201ENST00000409076 KRTAP10-8P60410 259 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms