RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 Q5VSD8 79 aa2.77□□□□□ -1.97
PCDH11X-207ENST00000406881 A0A087X002 238 aa2.77□□□□□ -1.97
PCDH11X-207ENST00000406881 CELSR2Q9HCU4 2923 aa2.76□□□□□ -1.97
PCDH11X-207ENST00000406881 Q8N1X5 172 aa2.76□□□□□ -1.97
PCDH11X-207ENST00000406881 SPENQ96T58 3664 aaKnown RBP2.76□□□□□ -1.97
PCDH11X-207ENST00000406881 PDZD2O15018 2839 aa2.76□□□□□ -1.97
PCDH11X-207ENST00000406881 LINC01558Q9Y6Z2 57 aa2.76□□□□□ -1.97
PCDH11X-207ENST00000406881 Q6ZSA8 131 aa2.75□□□□□ -1.97
PCDH11X-207ENST00000406881 MXRA5Q9NR99 2828 aa2.75□□□□□ -1.97
PCDH11X-207ENST00000406881 COX6B2Q6YFQ2 88 aa2.74□□□□□ -1.97
PCDH11X-207ENST00000406881 SPINK7P58062 85 aa2.74□□□□□ -1.97
PCDH11X-207ENST00000406881 NF1P21359 2839 aa2.74□□□□□ -1.97
PCDH11X-207ENST00000406881 BSNQ9UPA5 3926 aa2.74□□□□□ -1.97
PCDH11X-207ENST00000406881 LAMA5O15230 3695 aa2.73□□□□□ -1.97
PCDH11X-207ENST00000406881 A8MU10 97 aa2.73□□□□□ -1.97
PCDH11X-207ENST00000406881 KRTAP13-2Q52LG2 175 aa2.73□□□□□ -1.97
PCDH11X-207ENST00000406881 CSAG1Q6PB30 78 aa2.73□□□□□ -1.97
PCDH11X-207ENST00000406881 DMAC1Q96GE9 116 aa2.73□□□□□ -1.97
PCDH11X-207ENST00000406881 DCHS2Q6V1P9 2916 aa2.73□□□□□ -1.97
PCDH11X-207ENST00000406881 A6NN06 94 aa2.73□□□□□ -1.97
PCDH11X-207ENST00000406881 SMG1Q96Q15 3661 aaKnown RBP2.72□□□□□ -1.97
PCDH11X-207ENST00000406881 CRYBG3Q68DQ2 2970 aa2.71□□□□□ -1.97
PCDH11X-207ENST00000406881 CFAP47Q6ZTR5 3102 aa2.71□□□□□ -1.98
PCDH11X-207ENST00000406881 SEC61BP60468 96 aaKnown RBP2.71□□□□□ -1.98
PCDH11X-207ENST00000406881 NOTCH2NLQ7Z3S9 236 aa2.71□□□□□ -1.98
PCDH11X-207ENST00000406881 RELNP78509 3460 aa2.7□□□□□ -1.98
PCDH11X-207ENST00000406881 FBN3Q75N90 2809 aa2.7□□□□□ -1.98
PCDH11X-207ENST00000406881 A0A1B0GU33 70 aa2.69□□□□□ -1.98
PCDH11X-207ENST00000406881 S4R3F8 94 aa2.68□□□□□ -1.98
PCDH11X-207ENST00000406881 KRTAP1-4P0C5Y4 121 aa2.67□□□□□ -1.98
PCDH11X-207ENST00000406881 ADM2Q7Z4H4 148 aa2.67□□□□□ -1.98
PCDH11X-207ENST00000406881 M0R2T5 61 aa2.66□□□□□ -1.98
PCDH11X-207ENST00000406881 TENM3Q9P273 2699 aa2.66□□□□□ -1.98
PCDH11X-207ENST00000406881 OTOGQ6ZRI0 2925 aa2.65□□□□□ -1.98
PCDH11X-207ENST00000406881 A8MUU9 505 aa2.64□□□□□ -1.99
PCDH11X-207ENST00000406881 CRIPTQ9P021 101 aa2.64□□□□□ -1.99
PCDH11X-207ENST00000406881 C20orf166-AS1Q96NR2 134 aa2.64□□□□□ -1.99
PCDH11X-207ENST00000406881 RPL37P61927 97 aaKnown RBP2.63□□□□□ -1.99
PCDH11X-207ENST00000406881 TENM1Q9UKZ4 2725 aa2.63□□□□□ -1.99
PCDH11X-207ENST00000406881 CSMD1Q96PZ7 3565 aa2.62□□□□□ -1.99
PCDH11X-207ENST00000406881 KRTAP3-3Q9BYR6 98 aa2.62□□□□□ -1.99
PCDH11X-207ENST00000406881 KRTAP3-2Q9BYR7 98 aa2.62□□□□□ -1.99
PCDH11X-207ENST00000406881 TENM2Q9NT68 2774 aa2.62□□□□□ -1.99
PCDH11X-207ENST00000406881 NBPF19A0A087WUL8 3843 aa2.62□□□□□ -1.99
PCDH11X-207ENST00000406881 A0A0D9SG42 100 aa2.62□□□□□ -1.99
PCDH11X-207ENST00000406881 ANK3Q12955 4377 aaKnown RBP2.62□□□□□ -1.99
PCDH11X-207ENST00000406881 ZFHX3Q15911 3703 aa2.62□□□□□ -1.99
PCDH11X-207ENST00000406881 KRTAP16-1A8MUX0 517 aa2.61□□□□□ -1.99
PCDH11X-207ENST00000406881 H1FX-AS1Q4G0G2 97 aa2.61□□□□□ -1.99
PCDH11X-207ENST00000406881 CELSR1Q9NYQ6 3014 aa2.6□□□□□ -1.99
PCDH11X-207ENST00000406881 A0A1B0GVY2 172 aa2.6□□□□□ -1.99
PCDH11X-207ENST00000406881 SPATA8Q6RVD6 105 aa2.6□□□□□ -1.99
PCDH11X-207ENST00000406881 A0A0A0MQY5 61 aa2.6□□□□□ -1.99
PCDH11X-207ENST00000406881 ROMO1P60602 79 aa2.58□□□□□ -2
PCDH11X-207ENST00000406881 KRTAP25-1Q3LHN0 102 aa2.57□□□□□ -2
PCDH11X-207ENST00000406881 R4GN34 69 aa2.57□□□□□ -2
PCDH11X-207ENST00000406881 VWFP04275 2813 aa2.57□□□□□ -2
PCDH11X-207ENST00000406881 SVEP1Q4LDE5 3571 aa2.57□□□□□ -2
PCDH11X-207ENST00000406881 AKAP9Q99996 3911 aa2.56□□□□□ -2
PCDH11X-207ENST00000406881 CAMK2N1Q7Z7J9 78 aa2.56□□□□□ -2
PCDH11X-207ENST00000406881 LUZP6Q538Z0 58 aa2.55□□□□□ -2
PCDH11X-207ENST00000406881 NDUFAF8A1L188 74 aa2.55□□□□□ -2
PCDH11X-207ENST00000406881 KRTAP10-8P60410 259 aa2.55□□□□□ -2
PCDH11X-207ENST00000406881 XP32Q5T750 250 aa2.54□□□□□ -2
PCDH11X-207ENST00000406881 TPRXLQ17RH7 258 aa2.54□□□□□ -2
PCDH11X-207ENST00000406881 CUBNO60494 3623 aa2.53□□□□□ -2
PCDH11X-207ENST00000406881 KRTAP13-3Q3SY46 172 aa2.53□□□□□ -2
PCDH11X-207ENST00000406881 FBN1P35555 2871 aaKnown RBP2.53□□□□□ -2
PCDH11X-207ENST00000406881 M0QZ58 72 aa2.53□□□□□ -2
PCDH11X-207ENST00000406881 PKD1L1Q8TDX9 2849 aa2.5□□□□□ -2.01
PCDH11X-207ENST00000406881 VPS13CQ709C8 3753 aa2.5□□□□□ -2.01
PCDH11X-207ENST00000406881 TGP01266 2768 aa2.49□□□□□ -2.01
PCDH11X-207ENST00000406881 CSMD2Q7Z408 3487 aa2.49□□□□□ -2.01
PCDH11X-207ENST00000406881 LCE2AQ5TA79 106 aaPredicted RBP2.48□□□□□ -2.01
PCDH11X-207ENST00000406881 ZNF469Q96JG9 3925 aaPredicted RBP2.48□□□□□ -2.01
PCDH11X-207ENST00000406881 PLAC4Q8WY50 150 aa2.45□□□□□ -2.02
PCDH11X-207ENST00000406881 SRRM2Q9UQ35 2752 aaKnown RBP2.44□□□□□ -2.02
PCDH11X-207ENST00000406881 HUWE1Q7Z6Z7 4374 aaKnown RBP2.41□□□□□ -2.02
PCDH11X-207ENST00000406881 DNHD1Q96M86 4753 aa2.41□□□□□ -2.02
PCDH11X-207ENST00000406881 KRTAP10-4P60372 401 aaPredicted RBP2.4□□□□□ -2.02
PCDH11X-207ENST00000406881 TRRAPQ9Y4A5 3859 aa2.4□□□□□ -2.03
PCDH11X-207ENST00000406881 ANK2Q01484 3957 aa2.4□□□□□ -2.03
PCDH11X-207ENST00000406881 H0YAA0 97 aa2.39□□□□□ -2.03
PCDH11X-207ENST00000406881 LCE2BO14633 110 aa2.39□□□□□ -2.03
PCDH11X-207ENST00000406881 MEGF8Q7Z7M0 2845 aa2.38□□□□□ -2.03
PCDH11X-207ENST00000406881 MT1HL1P0DM35 61 aa2.37□□□□□ -2.03
PCDH11X-207ENST00000406881 C10orf95Q9H7T3 257 aa2.37□□□□□ -2.03
PCDH11X-207ENST00000406881 KRTAP3-1Q9BYR8 98 aa2.36□□□□□ -2.03
PCDH11X-207ENST00000406881 KRTAP17-1Q9BYP8 105 aa2.36□□□□□ -2.03
PCDH11X-207ENST00000406881 P0C880 135 aa2.35□□□□□ -2.03
PCDH11X-207ENST00000406881 ALMS1Q8TCU4 4167 aa2.35□□□□□ -2.03
PCDH11X-207ENST00000406881 DNAH9Q9NYC9 4486 aa2.35□□□□□ -2.03
PCDH11X-207ENST00000406881 TNP1P09430 55 aa2.35□□□□□ -2.03
PCDH11X-207ENST00000406881 CMYA5Q8N3K9 4069 aa2.34□□□□□ -2.03
PCDH11X-207ENST00000406881 PP632Q6XCG6 107 aa2.34□□□□□ -2.03
PCDH11X-207ENST00000406881 BIRC6Q9NR09 4857 aa2.31□□□□□ -2.04
PCDH11X-207ENST00000406881 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
PCDH11X-207ENST00000406881 CSMD3Q7Z407 3707 aa2.28□□□□□ -2.04
PCDH11X-207ENST00000406881 VPS13DQ5THJ4 4388 aa2.28□□□□□ -2.04
PCDH11X-207ENST00000406881 DNAH3Q8TD57 4116 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms