RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 DNAH2Q9P225 4427 aa10.97□□□□□ -0.65
EWSR1-207ENST00000406548 MEGF8Q7Z7M0 2845 aa10.97□□□□□ -0.65
EWSR1-207ENST00000406548 A0A087X002 238 aa10.94□□□□□ -0.66
EWSR1-207ENST00000406548 NOTCH2NLQ7Z3S9 236 aa10.94□□□□□ -0.66
EWSR1-207ENST00000406548 KMT2AQ03164 3969 aa10.92□□□□□ -0.66
EWSR1-207ENST00000406548 PRR15LQ9BU68 103 aa10.91□□□□□ -0.66
EWSR1-207ENST00000406548 IGLV7-43P04211 117 aa10.9□□□□□ -0.66
EWSR1-207ENST00000406548 SPINK6Q6UWN8 80 aa10.88□□□□□ -0.67
EWSR1-207ENST00000406548 FBN3Q75N90 2809 aa10.87□□□□□ -0.67
EWSR1-207ENST00000406548 CHKB-CPT1BH3BT56 60 aa10.87□□□□□ -0.67
EWSR1-207ENST00000406548 C1orf134Q5TEV5 83 aa10.86□□□□□ -0.67
EWSR1-207ENST00000406548 CIRBP-AS1Q8TBR5 109 aa10.85□□□□□ -0.67
EWSR1-207ENST00000406548 LOC101927531A0A1B0GV80 90 aa10.84□□□□□ -0.67
EWSR1-207ENST00000406548 Q75L30 129 aa10.82□□□□□ -0.68
EWSR1-207ENST00000406548 A8MU10 97 aa10.81□□□□□ -0.68
EWSR1-207ENST00000406548 HRES1P13985 223 aa10.8□□□□□ -0.68
EWSR1-207ENST00000406548 KRTAP13-3Q3SY46 172 aa10.8□□□□□ -0.68
EWSR1-207ENST00000406548 Q5W150 140 aa10.79□□□□□ -0.68
EWSR1-207ENST00000406548 SSBP3-AS1Q7Z2R9 100 aa10.78□□□□□ -0.68
EWSR1-207ENST00000406548 ALMS1Q8TCU4 4167 aa10.78□□□□□ -0.68
EWSR1-207ENST00000406548 LINC01558Q9Y6Z2 57 aa10.77□□□□□ -0.69
EWSR1-207ENST00000406548 SPAG11AQ6PDA7 123 aa10.76□□□□□ -0.69
EWSR1-207ENST00000406548 C8orf87E5RJ46 101 aa10.76□□□□□ -0.69
EWSR1-207ENST00000406548 TGP01266 2768 aa10.75□□□□□ -0.69
EWSR1-207ENST00000406548 DNAH11Q96DT5 4516 aa10.74□□□□□ -0.69
EWSR1-207ENST00000406548 DNAH5Q8TE73 4624 aa10.74□□□□□ -0.69
EWSR1-207ENST00000406548 A6NED7 52 aa10.73□□□□□ -0.69
EWSR1-207ENST00000406548 LY6G6CO95867 125 aa10.73□□□□□ -0.69
EWSR1-207ENST00000406548 PMAIP1Q13794 54 aa10.72□□□□□ -0.69
EWSR1-207ENST00000406548 DNAH6Q9C0G6 4158 aa10.71□□□□□ -0.7
EWSR1-207ENST00000406548 LCA10Q71F78 164 aa10.7□□□□□ -0.7
EWSR1-207ENST00000406548 KRTAP10-2P60368 255 aa10.69□□□□□ -0.7
EWSR1-207ENST00000406548 LINC00313P59037 77 aa10.66□□□□□ -0.7
EWSR1-207ENST00000406548 KRTAP13-2Q52LG2 175 aa10.64□□□□□ -0.71
EWSR1-207ENST00000406548 CDC42SE1Q9NRR8 79 aa10.64□□□□□ -0.71
EWSR1-207ENST00000406548 FAM229AH3BQW9 127 aa10.62□□□□□ -0.71
EWSR1-207ENST00000406548 ATP11AUNQ6ZP68 121 aa10.62□□□□□ -0.71
EWSR1-207ENST00000406548 SPTSSBQ8NFR3 76 aa10.62□□□□□ -0.71
EWSR1-207ENST00000406548 ACYP2P14621 99 aa10.61□□□□□ -0.71
EWSR1-207ENST00000406548 PRR26Q8N8Z3 221 aa10.61□□□□□ -0.71
EWSR1-207ENST00000406548 Q6ZSA8 131 aa10.58□□□□□ -0.72
EWSR1-207ENST00000406548 DMAC1Q96GE9 116 aa10.58□□□□□ -0.72
EWSR1-207ENST00000406548 RETNLBQ9BQ08 111 aa10.57□□□□□ -0.72
EWSR1-207ENST00000406548 SPINK7P58062 85 aa10.56□□□□□ -0.72
EWSR1-207ENST00000406548 KRTAP10-1P60331 282 aa10.56□□□□□ -0.72
EWSR1-207ENST00000406548 LRP1BQ9NZR2 4599 aa10.55□□□□□ -0.72
EWSR1-207ENST00000406548 IGKV2-30P06310 120 aa10.54□□□□□ -0.72
EWSR1-207ENST00000406548 KRTAP16-1A8MUX0 517 aa10.53□□□□□ -0.72
EWSR1-207ENST00000406548 PKD1P98161 4303 aa10.52□□□□□ -0.73
EWSR1-207ENST00000406548 KRTAP1-4P0C5Y4 121 aa10.51□□□□□ -0.73
EWSR1-207ENST00000406548 A6NN06 94 aa10.49□□□□□ -0.73
EWSR1-207ENST00000406548 SEC61GP60059 68 aa10.48□□□□□ -0.73
EWSR1-207ENST00000406548 KTN1-AS1Q86SY8 53 aa10.47□□□□□ -0.73
EWSR1-207ENST00000406548 FAT2Q9NYQ8 4349 aa10.46□□□□□ -0.74
EWSR1-207ENST00000406548 HYDINQ4G0P3 5121 aa10.42□□□□□ -0.74
EWSR1-207ENST00000406548 VPS13BQ7Z7G8 4022 aa10.4□□□□□ -0.74
EWSR1-207ENST00000406548 C4orf48Q5BLP8 95 aa10.39□□□□□ -0.75
EWSR1-207ENST00000406548 IGKV2D-30A0A075B6S6 120 aa10.39□□□□□ -0.75
EWSR1-207ENST00000406548 PLA2G1BP04054 148 aaKnown RBP10.38□□□□□ -0.75
EWSR1-207ENST00000406548 TYMSOSQ8TAI1 123 aa10.37□□□□□ -0.75
EWSR1-207ENST00000406548 A0A1B0GU69 56 aa10.35□□□□□ -0.75
EWSR1-207ENST00000406548 SPINK1P00995 79 aa10.35□□□□□ -0.75
EWSR1-207ENST00000406548 C7orf65Q6ZTY9 151 aa10.31□□□□□ -0.76
EWSR1-207ENST00000406548 LINC00304Q8N9R0 145 aa10.23□□□□□ -0.77
EWSR1-207ENST00000406548 RPS29P62273 56 aaKnown RBP10.22□□□□□ -0.77
EWSR1-207ENST00000406548 SPATA8Q6RVD6 105 aa10.21□□□□□ -0.77
EWSR1-207ENST00000406548 RBM12B-AS1Q9P1G2 102 aa10.21□□□□□ -0.77
EWSR1-207ENST00000406548 SACSQ9NZJ4 4579 aa10.19□□□□□ -0.78
EWSR1-207ENST00000406548 UQCR11O14957 56 aa10.18□□□□□ -0.78
EWSR1-207ENST00000406548 MIR22HGQ0VDD5 57 aa10.16□□□□□ -0.78
EWSR1-207ENST00000406548 PKHD1P08F94 4074 aa10.15□□□□□ -0.78
EWSR1-207ENST00000406548 Q8N1X5 172 aa10.14□□□□□ -0.79
EWSR1-207ENST00000406548 DYNC1H1Q14204 4646 aaKnown RBP10.08□□□□□ -0.8
EWSR1-207ENST00000406548 SMR3BP02814 79 aaPredicted RBP10.06□□□□□ -0.8
EWSR1-207ENST00000406548 C9orf92A6NGG3 77 aa10.04□□□□□ -0.8
EWSR1-207ENST00000406548 A8MUU9 505 aa10.04□□□□□ -0.8
EWSR1-207ENST00000406548 C20orf166-AS1Q96NR2 134 aa10.04□□□□□ -0.8
EWSR1-207ENST00000406548 A0A1B0GVY2 172 aa10.03□□□□□ -0.8
EWSR1-207ENST00000406548 PKHD1L1Q86WI1 4243 aa10.02□□□□□ -0.81
EWSR1-207ENST00000406548 APOBP04114 4563 aaKnown RBP10□□□□□ -0.81
EWSR1-207ENST00000406548 PRAC1Q96KF2 57 aa9.99□□□□□ -0.81
EWSR1-207ENST00000406548 KRTAP10-4P60372 401 aaPredicted RBP9.96□□□□□ -0.82
EWSR1-207ENST00000406548 ADM2Q7Z4H4 148 aa9.96□□□□□ -0.82
EWSR1-207ENST00000406548 FAT1Q14517 4588 aa9.96□□□□□ -0.82
EWSR1-207ENST00000406548 RYR2Q92736 4967 aa9.95□□□□□ -0.82
EWSR1-207ENST00000406548 KRTAP3-1Q9BYR8 98 aa9.91□□□□□ -0.82
EWSR1-207ENST00000406548 KMT2CQ8NEZ4 4911 aaKnown RBP9.9□□□□□ -0.82
EWSR1-207ENST00000406548 H0YAA0 97 aa9.82□□□□□ -0.84
EWSR1-207ENST00000406548 A0A1B0GU33 70 aa9.76□□□□□ -0.85
EWSR1-207ENST00000406548 COX6B2Q6YFQ2 88 aa9.75□□□□□ -0.85
EWSR1-207ENST00000406548 H1FX-AS1Q4G0G2 97 aa9.74□□□□□ -0.85
EWSR1-207ENST00000406548 FLG2Q5D862 2391 aaPredicted RBP9.74□□□□□ -0.85
EWSR1-207ENST00000406548 LINC01554Q52M75 96 aa9.7□□□□□ -0.86
EWSR1-207ENST00000406548 CSAG1Q6PB30 78 aa9.7□□□□□ -0.86
EWSR1-207ENST00000406548 FAT3Q8TDW7 4589 aa9.7□□□□□ -0.86
EWSR1-207ENST00000406548 RYR3Q15413 4870 aa9.65□□□□□ -0.86
EWSR1-207ENST00000406548 TNXBP22105 4242 aa9.61□□□□□ -0.87
EWSR1-207ENST00000406548 LRP1Q07954 4544 aaKnown RBP9.59□□□□□ -0.87
EWSR1-207ENST00000406548 KRTAP10-8P60410 259 aa9.58□□□□□ -0.88
EWSR1-207ENST00000406548 RPL37P61927 97 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms