RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 A6NED7 52 aa5.87□□□□□ -1.47
MSH2-202ENST00000406134 ANAPC11Q9NYG5 84 aa5.87□□□□□ -1.47
MSH2-202ENST00000406134 IGLV9-49A0A0B4J1Y8 123 aa5.86□□□□□ -1.47
MSH2-202ENST00000406134 H0Y9P7 68 aa5.86□□□□□ -1.47
MSH2-202ENST00000406134 PRR15LQ9BU68 103 aa5.86□□□□□ -1.47
MSH2-202ENST00000406134 PLAC8Q9NZF1 115 aa5.86□□□□□ -1.47
MSH2-202ENST00000406134 LINC00208Q96KT6 92 aa5.86□□□□□ -1.47
MSH2-202ENST00000406134 RTL8CO15255 209 aa5.86□□□□□ -1.47
MSH2-202ENST00000406134 A0A087X002 238 aa5.85□□□□□ -1.47
MSH2-202ENST00000406134 Q5VV11 94 aa5.85□□□□□ -1.47
MSH2-202ENST00000406134 NOTCH2NLQ7Z3S9 236 aa5.85□□□□□ -1.47
MSH2-202ENST00000406134 ATP11AUNQ6ZP68 121 aa5.83□□□□□ -1.48
MSH2-202ENST00000406134 SPANXA2-OT1Q8N9U9 137 aa5.83□□□□□ -1.48
MSH2-202ENST00000406134 H3BPC8 53 aa5.82□□□□□ -1.48
MSH2-202ENST00000406134 NDUFB1O75438 58 aa5.81□□□□□ -1.48
MSH2-202ENST00000406134 C7orf65Q6ZTY9 151 aa5.81□□□□□ -1.48
MSH2-202ENST00000406134 MP68P56378 58 aa5.81□□□□□ -1.48
MSH2-202ENST00000406134 C8orf17Q9NRJ1 99 aa5.81□□□□□ -1.48
MSH2-202ENST00000406134 ZNF861PO60384 105 aa5.8□□□□□ -1.48
MSH2-202ENST00000406134 LCA10Q71F78 164 aa5.8□□□□□ -1.48
MSH2-202ENST00000406134 KRTAP13-3Q3SY46 172 aa5.79□□□□□ -1.48
MSH2-202ENST00000406134 SACSQ9NZJ4 4579 aa5.79□□□□□ -1.48
MSH2-202ENST00000406134 A0A1B0GVX0 72 aa5.79□□□□□ -1.48
MSH2-202ENST00000406134 A6NN06 94 aa5.78□□□□□ -1.48
MSH2-202ENST00000406134 IGLV7-46A0A075B6I9 117 aa5.77□□□□□ -1.49
MSH2-202ENST00000406134 LIMD2Q9BT23 127 aa5.77□□□□□ -1.49
MSH2-202ENST00000406134 PKHD1L1Q86WI1 4243 aa5.76□□□□□ -1.49
MSH2-202ENST00000406134 Q8N9P0 234 aaPredicted RBP5.75□□□□□ -1.49
MSH2-202ENST00000406134 ZNF706Q9Y5V0 76 aaPredicted RBP5.75□□□□□ -1.49
MSH2-202ENST00000406134 IGHV6-1A0A0B4J1U7 121 aa5.75□□□□□ -1.49
MSH2-202ENST00000406134 IGLV7-43P04211 117 aa5.75□□□□□ -1.49
MSH2-202ENST00000406134 KRTAP10-2P60368 255 aa5.75□□□□□ -1.49
MSH2-202ENST00000406134 PRAC1Q96KF2 57 aa5.75□□□□□ -1.49
MSH2-202ENST00000406134 PRR26Q8N8Z3 221 aa5.74□□□□□ -1.49
MSH2-202ENST00000406134 Q5W150 140 aa5.74□□□□□ -1.49
MSH2-202ENST00000406134 TP53AIP1Q9HCN2 124 aa5.73□□□□□ -1.49
MSH2-202ENST00000406134 MRPL34Q9BQ48 92 aaKnown RBP5.72□□□□□ -1.49
MSH2-202ENST00000406134 PCOTHQ58A44 107 aa5.72□□□□□ -1.49
MSH2-202ENST00000406134 COA5Q86WW8 74 aa5.71□□□□□ -1.5
MSH2-202ENST00000406134 LY6G6CO95867 125 aa5.71□□□□□ -1.5
MSH2-202ENST00000406134 CIRBP-AS1Q8TBR5 109 aa5.71□□□□□ -1.5
MSH2-202ENST00000406134 APOBP04114 4563 aaKnown RBP5.71□□□□□ -1.5
MSH2-202ENST00000406134 KRTAP13-2Q52LG2 175 aa5.7□□□□□ -1.5
MSH2-202ENST00000406134 C1orf134Q5TEV5 83 aa5.7□□□□□ -1.5
MSH2-202ENST00000406134 CDC42SE1Q9NRR8 79 aa5.7□□□□□ -1.5
MSH2-202ENST00000406134 Q6ZSA8 131 aa5.69□□□□□ -1.5
MSH2-202ENST00000406134 LINC00313P59037 77 aa5.69□□□□□ -1.5
MSH2-202ENST00000406134 LINC01554Q52M75 96 aa5.68□□□□□ -1.5
MSH2-202ENST00000406134 Q75L30 129 aa5.68□□□□□ -1.5
MSH2-202ENST00000406134 HRES1P13985 223 aa5.67□□□□□ -1.5
MSH2-202ENST00000406134 DYNC1H1Q14204 4646 aaKnown RBP5.66□□□□□ -1.5
MSH2-202ENST00000406134 LOC101927531A0A1B0GV80 90 aa5.66□□□□□ -1.5
MSH2-202ENST00000406134 KRTAP1-4P0C5Y4 121 aa5.66□□□□□ -1.5
MSH2-202ENST00000406134 KRTAP10-1P60331 282 aa5.66□□□□□ -1.5
MSH2-202ENST00000406134 SPAG11AQ6PDA7 123 aa5.65□□□□□ -1.5
MSH2-202ENST00000406134 KRTAP16-1A8MUX0 517 aa5.65□□□□□ -1.51
MSH2-202ENST00000406134 ADM2Q7Z4H4 148 aa5.65□□□□□ -1.51
MSH2-202ENST00000406134 SPINK6Q6UWN8 80 aa5.64□□□□□ -1.51
MSH2-202ENST00000406134 SSBP3-AS1Q7Z2R9 100 aa5.62□□□□□ -1.51
MSH2-202ENST00000406134 SPINK7P58062 85 aa5.61□□□□□ -1.51
MSH2-202ENST00000406134 FAT1Q14517 4588 aa5.61□□□□□ -1.51
MSH2-202ENST00000406134 CDK2AP2O75956 126 aa5.6□□□□□ -1.51
MSH2-202ENST00000406134 LINC01558Q9Y6Z2 57 aa5.6□□□□□ -1.51
MSH2-202ENST00000406134 RETNLBQ9BQ08 111 aa5.57□□□□□ -1.52
MSH2-202ENST00000406134 RYR2Q92736 4967 aa5.55□□□□□ -1.52
MSH2-202ENST00000406134 DMAC1Q96GE9 116 aa5.54□□□□□ -1.52
MSH2-202ENST00000406134 IGKV2-30P06310 120 aa5.53□□□□□ -1.52
MSH2-202ENST00000406134 TNXBP22105 4242 aa5.53□□□□□ -1.52
MSH2-202ENST00000406134 KMT2CQ8NEZ4 4911 aaKnown RBP5.52□□□□□ -1.53
MSH2-202ENST00000406134 FAM229AH3BQW9 127 aa5.49□□□□□ -1.53
MSH2-202ENST00000406134 KRTAP21-3Q3LHN1 58 aa5.48□□□□□ -1.53
MSH2-202ENST00000406134 PLA2G1BP04054 148 aaKnown RBP5.47□□□□□ -1.53
MSH2-202ENST00000406134 CSAG1Q6PB30 78 aa5.47□□□□□ -1.53
MSH2-202ENST00000406134 FAT3Q8TDW7 4589 aa5.47□□□□□ -1.53
MSH2-202ENST00000406134 KRTAP10-4P60372 401 aaPredicted RBP5.47□□□□□ -1.53
MSH2-202ENST00000406134 HSPG2P98160 4391 aa5.46□□□□□ -1.54
MSH2-202ENST00000406134 ACYP2P14621 99 aa5.45□□□□□ -1.54
MSH2-202ENST00000406134 LRP1Q07954 4544 aaKnown RBP5.43□□□□□ -1.54
MSH2-202ENST00000406134 TYMSOSQ8TAI1 123 aa5.41□□□□□ -1.54
MSH2-202ENST00000406134 SPINK1P00995 79 aa5.41□□□□□ -1.54
MSH2-202ENST00000406134 A0A1B0GVY2 172 aa5.4□□□□□ -1.54
MSH2-202ENST00000406134 IGKV2D-30A0A075B6S6 120 aa5.38□□□□□ -1.55
MSH2-202ENST00000406134 RPS29P62273 56 aaKnown RBP5.38□□□□□ -1.55
MSH2-202ENST00000406134 RYR3Q15413 4870 aa5.37□□□□□ -1.55
MSH2-202ENST00000406134 DMBT1Q9UGM3 2413 aaPredicted RBP5.37□□□□□ -1.55
MSH2-202ENST00000406134 FLG2Q5D862 2391 aaPredicted RBP5.36□□□□□ -1.55
MSH2-202ENST00000406134 SMR3BP02814 79 aaPredicted RBP5.36□□□□□ -1.55
MSH2-202ENST00000406134 LINC00304Q8N9R0 145 aa5.35□□□□□ -1.55
MSH2-202ENST00000406134 KRTAP3-1Q9BYR8 98 aa5.34□□□□□ -1.56
MSH2-202ENST00000406134 A0A1B0GU69 56 aa5.33□□□□□ -1.56
MSH2-202ENST00000406134 C20orf166-AS1Q96NR2 134 aa5.32□□□□□ -1.56
MSH2-202ENST00000406134 A8MUU9 505 aa5.32□□□□□ -1.56
MSH2-202ENST00000406134 SPATA8Q6RVD6 105 aa5.31□□□□□ -1.56
MSH2-202ENST00000406134 MIR22HGQ0VDD5 57 aa5.31□□□□□ -1.56
MSH2-202ENST00000406134 Q8N1X5 172 aa5.3□□□□□ -1.56
MSH2-202ENST00000406134 ROMO1P60602 79 aa5.29□□□□□ -1.56
MSH2-202ENST00000406134 LPAP08519 4548 aa5.28□□□□□ -1.56
MSH2-202ENST00000406134 C9orf92A6NGG3 77 aa5.28□□□□□ -1.56
MSH2-202ENST00000406134 A0A0A0MQY5 61 aa5.27□□□□□ -1.57
MSH2-202ENST00000406134 RYR1P21817 5038 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms