RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 VPS13BQ7Z7G8 4022 aa14.94□□□□□ -0.02
SHARPIN-202ENST00000398712 H3BPC8 53 aa14.94□□□□□ -0.02
SHARPIN-202ENST00000398712 H0Y9P7 68 aa14.93□□□□□ -0.02
SHARPIN-202ENST00000398712 TP53AIP1Q9HCN2 124 aa14.93□□□□□ -0.02
SHARPIN-202ENST00000398712 PKHD1P08F94 4074 aa14.93□□□□□ -0.02
SHARPIN-202ENST00000398712 LIMD2Q9BT23 127 aa14.9□□□□□ -0.02
SHARPIN-202ENST00000398712 TYMSOSQ8TAI1 123 aa14.9□□□□□ -0.02
SHARPIN-202ENST00000398712 MRPL34Q9BQ48 92 aaKnown RBP14.9□□□□□ -0.02
SHARPIN-202ENST00000398712 SERP1Q9Y6X1 66 aa14.9□□□□□ -0.02
SHARPIN-202ENST00000398712 SMR3BP02814 79 aaPredicted RBP14.88□□□□□ -0.03
SHARPIN-202ENST00000398712 LINC00208Q96KT6 92 aa14.88□□□□□ -0.03
SHARPIN-202ENST00000398712 TRAV22A0A0B4J277 110 aa14.87□□□□□ -0.03
SHARPIN-202ENST00000398712 C4orf48Q5BLP8 95 aa14.87□□□□□ -0.03
SHARPIN-202ENST00000398712 C8orf87E5RJ46 101 aa14.85□□□□□ -0.03
SHARPIN-202ENST00000398712 NOTCH2NLQ7Z3S9 236 aa14.85□□□□□ -0.03
SHARPIN-202ENST00000398712 C1orf195Q5TG92 126 aa14.84□□□□□ -0.03
SHARPIN-202ENST00000398712 DYNC1H1Q14204 4646 aaKnown RBP14.84□□□□□ -0.03
SHARPIN-202ENST00000398712 NDUFS5O43920 106 aa14.83□□□□□ -0.03
SHARPIN-202ENST00000398712 EPPK1P58107 5090 aaKnown RBP14.83□□□□□ -0.04
SHARPIN-202ENST00000398712 OXTP01178 125 aa14.81□□□□□ -0.04
SHARPIN-202ENST00000398712 SPINK1P00995 79 aa14.8□□□□□ -0.04
SHARPIN-202ENST00000398712 C1orf64Q8NEQ6 169 aa14.79□□□□□ -0.04
SHARPIN-202ENST00000398712 PRR26Q8N8Z3 221 aa14.75□□□□□ -0.05
SHARPIN-202ENST00000398712 KRTAP10-4P60372 401 aaPredicted RBP14.74□□□□□ -0.05
SHARPIN-202ENST00000398712 LINC00313P59037 77 aa14.73□□□□□ -0.05
SHARPIN-202ENST00000398712 LINC00304Q8N9R0 145 aa14.71□□□□□ -0.05
SHARPIN-202ENST00000398712 SPAG11AQ6PDA7 123 aa14.7□□□□□ -0.06
SHARPIN-202ENST00000398712 RPS29P62273 56 aaKnown RBP14.7□□□□□ -0.06
SHARPIN-202ENST00000398712 APOBP04114 4563 aaKnown RBP14.67□□□□□ -0.06
SHARPIN-202ENST00000398712 CYP4F30PQ9H0H9 118 aa14.65□□□□□ -0.06
SHARPIN-202ENST00000398712 SPANXA2-OT1Q8N9U9 137 aa14.64□□□□□ -0.07
SHARPIN-202ENST00000398712 SMIM26A0A096LP01 95 aa14.57□□□□□ -0.08
SHARPIN-202ENST00000398712 Q8N9P0 234 aaPredicted RBP14.57□□□□□ -0.08
SHARPIN-202ENST00000398712 PRR4Q16378 134 aa14.56□□□□□ -0.08
SHARPIN-202ENST00000398712 BIRC6Q9NR09 4857 aa14.54□□□□□ -0.08
SHARPIN-202ENST00000398712 FAM229AH3BQW9 127 aa14.54□□□□□ -0.08
SHARPIN-202ENST00000398712 LOC101927531A0A1B0GV80 90 aa14.53□□□□□ -0.08
SHARPIN-202ENST00000398712 KRTAP13-3Q3SY46 172 aa14.53□□□□□ -0.08
SHARPIN-202ENST00000398712 KRTAP16-1A8MUX0 517 aa14.52□□□□□ -0.08
SHARPIN-202ENST00000398712 Q5W150 140 aa14.52□□□□□ -0.08
SHARPIN-202ENST00000398712 PCOTHQ58A44 107 aa14.5□□□□□ -0.09
SHARPIN-202ENST00000398712 IGLV7-46A0A075B6I9 117 aa14.47□□□□□ -0.09
SHARPIN-202ENST00000398712 FAT1Q14517 4588 aa14.46□□□□□ -0.09
SHARPIN-202ENST00000398712 FP248Q71RG6 208 aaPredicted RBP14.42□□□□□ -0.1
SHARPIN-202ENST00000398712 KIAA1109Q2LD37 5005 aa14.41□□□□□ -0.1
SHARPIN-202ENST00000398712 PKHD1L1Q86WI1 4243 aa14.37□□□□□ -0.11
SHARPIN-202ENST00000398712 Q5VSD8 79 aa14.37□□□□□ -0.11
SHARPIN-202ENST00000398712 HSPG2P98160 4391 aa14.35□□□□□ -0.11
SHARPIN-202ENST00000398712 C4orf26Q17RF5 130 aa14.34□□□□□ -0.11
SHARPIN-202ENST00000398712 RETNLBQ9BQ08 111 aa14.33□□□□□ -0.12
SHARPIN-202ENST00000398712 RYR1P21817 5038 aa14.32□□□□□ -0.12
SHARPIN-202ENST00000398712 IGKV2-30P06310 120 aa14.28□□□□□ -0.12
SHARPIN-202ENST00000398712 MPLKIPQ8TAP9 179 aa14.25□□□□□ -0.13
SHARPIN-202ENST00000398712 COA5Q86WW8 74 aa14.23□□□□□ -0.13
SHARPIN-202ENST00000398712 HERC2O95714 4834 aa14.2□□□□□ -0.14
SHARPIN-202ENST00000398712 KRTAP10-8P60410 259 aa14.2□□□□□ -0.14
SHARPIN-202ENST00000398712 Q1T7F1 81 aa14.17□□□□□ -0.14
SHARPIN-202ENST00000398712 Q8N1X5 172 aa14.17□□□□□ -0.14
SHARPIN-202ENST00000398712 HRES1P13985 223 aa14.17□□□□□ -0.14
SHARPIN-202ENST00000398712 C9orf92A6NGG3 77 aa14.16□□□□□ -0.14
SHARPIN-202ENST00000398712 KRTAP17-1Q9BYP8 105 aa14.16□□□□□ -0.14
SHARPIN-202ENST00000398712 IGKV2D-30A0A075B6S6 120 aa14.13□□□□□ -0.15
SHARPIN-202ENST00000398712 C20orf166-AS1Q96NR2 134 aa14.12□□□□□ -0.15
SHARPIN-202ENST00000398712 A8MUU9 505 aa14.11□□□□□ -0.15
SHARPIN-202ENST00000398712 V9GYY9 64 aa14.1□□□□□ -0.15
SHARPIN-202ENST00000398712 FLG2Q5D862 2391 aaPredicted RBP14.08□□□□□ -0.16
SHARPIN-202ENST00000398712 ACYP2P14621 99 aa14.06□□□□□ -0.16
SHARPIN-202ENST00000398712 DMAC1Q96GE9 116 aa14.06□□□□□ -0.16
SHARPIN-202ENST00000398712 C7orf65Q6ZTY9 151 aa14.04□□□□□ -0.16
SHARPIN-202ENST00000398712 TNXBP22105 4242 aa13.99□□□□□ -0.17
SHARPIN-202ENST00000398712 KRTAP4-5Q9BYR2 181 aa13.96□□□□□ -0.18
SHARPIN-202ENST00000398712 LRP1Q07954 4544 aaKnown RBP13.93□□□□□ -0.18
SHARPIN-202ENST00000398712 Q75L30 129 aa13.93□□□□□ -0.18
SHARPIN-202ENST00000398712 PSPHP1O15172 72 aa13.9□□□□□ -0.18
SHARPIN-202ENST00000398712 ABCA13Q86UQ4 5058 aa13.88□□□□□ -0.19
SHARPIN-202ENST00000398712 CHKB-CPT1BH3BT56 60 aa13.87□□□□□ -0.19
SHARPIN-202ENST00000398712 MT1HL1P0DM35 61 aa13.86□□□□□ -0.19
SHARPIN-202ENST00000398712 FAT3Q8TDW7 4589 aa13.86□□□□□ -0.19
SHARPIN-202ENST00000398712 A8MUN3 132 aa13.84□□□□□ -0.19
SHARPIN-202ENST00000398712 LINC01558Q9Y6Z2 57 aa13.81□□□□□ -0.2
SHARPIN-202ENST00000398712 PRR15LQ9BU68 103 aa13.8□□□□□ -0.2
SHARPIN-202ENST00000398712 Q5VV11 94 aa13.76□□□□□ -0.21
SHARPIN-202ENST00000398712 PCLOQ9Y6V0 5065 aa13.75□□□□□ -0.21
SHARPIN-202ENST00000398712 SPINK7P58062 85 aa13.73□□□□□ -0.21
SHARPIN-202ENST00000398712 MYCBP2O75592 4640 aa13.72□□□□□ -0.21
SHARPIN-202ENST00000398712 BRK1Q8WUW1 75 aa13.72□□□□□ -0.21
SHARPIN-202ENST00000398712 ATP11AUNQ6ZP68 121 aa13.71□□□□□ -0.21
SHARPIN-202ENST00000398712 DMBT1Q9UGM3 2413 aaPredicted RBP13.71□□□□□ -0.21
SHARPIN-202ENST00000398712 RPL37P61927 97 aaKnown RBP13.68□□□□□ -0.22
SHARPIN-202ENST00000398712 SVIPQ8NHG7 77 aa13.68□□□□□ -0.22
SHARPIN-202ENST00000398712 XP32Q5T750 250 aa13.66□□□□□ -0.22
SHARPIN-202ENST00000398712 PRO0628Q9UI54 55 aa13.66□□□□□ -0.22
SHARPIN-202ENST00000398712 KRTAP3-1Q9BYR8 98 aa13.5□□□□□ -0.25
SHARPIN-202ENST00000398712 A6NED7 52 aa13.48□□□□□ -0.25
SHARPIN-202ENST00000398712 COX6B2Q6YFQ2 88 aa13.48□□□□□ -0.25
SHARPIN-202ENST00000398712 SPTSSBQ8NFR3 76 aa13.48□□□□□ -0.25
SHARPIN-202ENST00000398712 TPRXLQ17RH7 258 aa13.47□□□□□ -0.25
SHARPIN-202ENST00000398712 A0A1B0GU69 56 aa13.45□□□□□ -0.26
SHARPIN-202ENST00000398712 CDC42SE1Q9NRR8 79 aa13.31□□□□□ -0.28
SHARPIN-202ENST00000398712 LCA10Q71F78 164 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms