RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 TEP1Q99973 2627 aaKnown RBP6.69□□□□□ -1.34
SMU1-201ENST00000397149 Q6ZRN7 208 aaPredicted RBP6.69□□□□□ -1.34
SMU1-201ENST00000397149 KMT2BQ9UMN6 2715 aaPredicted RBP6.69□□□□□ -1.34
SMU1-201ENST00000397149 PRO2289Q9P1D8 64 aa6.66□□□□□ -1.34
SMU1-201ENST00000397149 IGSF10Q6WRI0 2623 aa6.65□□□□□ -1.35
SMU1-201ENST00000397149 DSPP15924 2871 aaKnown RBP6.63□□□□□ -1.35
SMU1-201ENST00000397149 NSD1Q96L73 2696 aaPredicted RBP6.61□□□□□ -1.35
SMU1-201ENST00000397149 LRBAP50851 2863 aa6.6□□□□□ -1.35
SMU1-201ENST00000397149 DMDP11532 3685 aa6.58□□□□□ -1.36
SMU1-201ENST00000397149 ZFHX4Q86UP3 3567 aa6.58□□□□□ -1.36
SMU1-201ENST00000397149 KALRNO60229 2985 aa6.57□□□□□ -1.36
SMU1-201ENST00000397149 MAP1AP78559 2803 aaPredicted RBP6.57□□□□□ -1.36
SMU1-201ENST00000397149 KRTAP7-1Q8IUC3 87 aa6.54□□□□□ -1.36
SMU1-201ENST00000397149 GCN1Q92616 2671 aaKnown RBP6.52□□□□□ -1.36
SMU1-201ENST00000397149 DCHS1Q96JQ0 3298 aa6.52□□□□□ -1.37
SMU1-201ENST00000397149 LOC400499M0QZD8 3231 aa6.51□□□□□ -1.37
SMU1-201ENST00000397149 XP32Q5T750 250 aa6.51□□□□□ -1.37
SMU1-201ENST00000397149 TNRC18O15417 2968 aaPredicted RBP6.5□□□□□ -1.37
SMU1-201ENST00000397149 H0YAA0 97 aa6.5□□□□□ -1.37
SMU1-201ENST00000397149 LAMA5O15230 3695 aa6.49□□□□□ -1.37
SMU1-201ENST00000397149 DMXL2Q8TDJ6 3036 aa6.48□□□□□ -1.37
SMU1-201ENST00000397149 NBEAQ8NFP9 2946 aa6.48□□□□□ -1.37
SMU1-201ENST00000397149 NBEAL2Q6ZNJ1 2754 aa6.48□□□□□ -1.37
SMU1-201ENST00000397149 ADGRG4Q8IZF6 3080 aa6.47□□□□□ -1.37
SMU1-201ENST00000397149 ATMQ13315 3056 aa6.46□□□□□ -1.38
SMU1-201ENST00000397149 DMXL1Q9Y485 3027 aa6.45□□□□□ -1.38
SMU1-201ENST00000397149 KRTAP13-1Q8IUC0 172 aa6.43□□□□□ -1.38
SMU1-201ENST00000397149 CSMD1Q96PZ7 3565 aa6.4□□□□□ -1.38
SMU1-201ENST00000397149 COL12A1Q99715 3063 aa6.4□□□□□ -1.38
SMU1-201ENST00000397149 RELNP78509 3460 aa6.39□□□□□ -1.39
SMU1-201ENST00000397149 ZNF292O60281 2723 aa6.39□□□□□ -1.39
SMU1-201ENST00000397149 KRTAP12-2P59991 146 aa6.39□□□□□ -1.39
SMU1-201ENST00000397149 CRYBG3Q68DQ2 2970 aa6.37□□□□□ -1.39
SMU1-201ENST00000397149 TACC2O95359 2948 aa6.32□□□□□ -1.4
SMU1-201ENST00000397149 SMG1Q96Q15 3661 aaKnown RBP6.32□□□□□ -1.4
SMU1-201ENST00000397149 CRCT1Q9UGL9 99 aa6.3□□□□□ -1.4
SMU1-201ENST00000397149 ASH1LQ9NR48 2969 aaKnown RBP6.29□□□□□ -1.4
SMU1-201ENST00000397149 ZZEF1O43149 2961 aa6.28□□□□□ -1.4
SMU1-201ENST00000397149 APCP25054 2843 aa6.27□□□□□ -1.41
SMU1-201ENST00000397149 TPRXLQ17RH7 258 aa6.25□□□□□ -1.41
SMU1-201ENST00000397149 ITPR2Q14571 2701 aa6.25□□□□□ -1.41
SMU1-201ENST00000397149 UBR5O95071 2799 aaPredicted RBP6.25□□□□□ -1.41
SMU1-201ENST00000397149 NBPF19A0A087WUL8 3843 aa6.24□□□□□ -1.41
SMU1-201ENST00000397149 KRTAP15-1Q3LI76 137 aa6.23□□□□□ -1.41
SMU1-201ENST00000397149 MUC3AQ02505 3323 aa6.22□□□□□ -1.41
SMU1-201ENST00000397149 SVEP1Q4LDE5 3571 aa6.22□□□□□ -1.41
SMU1-201ENST00000397149 KRTAP1-4P0C5Y4 121 aa6.2□□□□□ -1.42
SMU1-201ENST00000397149 SPENQ96T58 3664 aaKnown RBP6.19□□□□□ -1.42
SMU1-201ENST00000397149 UTP20O75691 2785 aaKnown RBP6.19□□□□□ -1.42
SMU1-201ENST00000397149 ITPR1Q14643 2758 aa6.12□□□□□ -1.43
SMU1-201ENST00000397149 KRTAP13-3Q3SY46 172 aa6.12□□□□□ -1.43
SMU1-201ENST00000397149 HIVEP1P15822 2718 aa6.1□□□□□ -1.43
SMU1-201ENST00000397149 KRTAP13-4Q3LI77 160 aa6.07□□□□□ -1.44
SMU1-201ENST00000397149 CUBNO60494 3623 aa6.07□□□□□ -1.44
SMU1-201ENST00000397149 FLNCQ14315 2725 aa6.01□□□□□ -1.45
SMU1-201ENST00000397149 HRNRQ86YZ3 2850 aaPredicted RBP6□□□□□ -1.45
SMU1-201ENST00000397149 CELSR2Q9HCU4 2923 aa5.96□□□□□ -1.45
SMU1-201ENST00000397149 TENM3Q9P273 2699 aa5.95□□□□□ -1.46
SMU1-201ENST00000397149 KRTAP12-1P59990 96 aa5.94□□□□□ -1.46
SMU1-201ENST00000397149 BSNQ9UPA5 3926 aa5.94□□□□□ -1.46
SMU1-201ENST00000397149 FBN2P35556 2912 aa5.93□□□□□ -1.46
SMU1-201ENST00000397149 ZANQ9Y493 2812 aa5.92□□□□□ -1.46
SMU1-201ENST00000397149 ZFHX3Q15911 3703 aa5.92□□□□□ -1.46
SMU1-201ENST00000397149 CSMD2Q7Z408 3487 aa5.9□□□□□ -1.46
SMU1-201ENST00000397149 DCHS2Q6V1P9 2916 aa5.9□□□□□ -1.46
SMU1-201ENST00000397149 TENM1Q9UKZ4 2725 aa5.9□□□□□ -1.46
SMU1-201ENST00000397149 TENM4Q6N022 2769 aa5.9□□□□□ -1.47
SMU1-201ENST00000397149 CELSR1Q9NYQ6 3014 aa5.89□□□□□ -1.47
SMU1-201ENST00000397149 KRTAP21-3Q3LHN1 58 aa5.89□□□□□ -1.47
SMU1-201ENST00000397149 VPS13CQ709C8 3753 aa5.85□□□□□ -1.47
SMU1-201ENST00000397149 TGP01266 2768 aa5.84□□□□□ -1.47
SMU1-201ENST00000397149 PDZD2O15018 2839 aa5.8□□□□□ -1.48
SMU1-201ENST00000397149 INE1O15225 51 aa5.76□□□□□ -1.49
SMU1-201ENST00000397149 NF1P21359 2839 aa5.75□□□□□ -1.49
SMU1-201ENST00000397149 TENM2Q9NT68 2774 aa5.72□□□□□ -1.49
SMU1-201ENST00000397149 NIPBLQ6KC79 2804 aaeCLIP5.71□□□□□ -1.5
SMU1-201ENST00000397149 KRTAP10-12P60413 245 aa5.69□□□□□ -1.5
SMU1-201ENST00000397149 KRTAP10-5P60370 271 aa5.67□□□□□ -1.5
SMU1-201ENST00000397149 KRTAP10-6P60371 365 aaPredicted RBP5.64□□□□□ -1.51
SMU1-201ENST00000397149 ANK3Q12955 4377 aaKnown RBP5.63□□□□□ -1.51
SMU1-201ENST00000397149 MXRA5Q9NR99 2828 aa5.62□□□□□ -1.51
SMU1-201ENST00000397149 TRRAPQ9Y4A5 3859 aa5.6□□□□□ -1.51
SMU1-201ENST00000397149 KRTAP3-1Q9BYR8 98 aa5.59□□□□□ -1.51
SMU1-201ENST00000397149 PKD1L1Q8TDX9 2849 aa5.59□□□□□ -1.51
SMU1-201ENST00000397149 VWFP04275 2813 aa5.59□□□□□ -1.51
SMU1-201ENST00000397149 AKAP9Q99996 3911 aa5.52□□□□□ -1.53
SMU1-201ENST00000397149 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
SMU1-201ENST00000397149 CSMD3Q7Z407 3707 aa5.48□□□□□ -1.53
SMU1-201ENST00000397149 ZNF469Q96JG9 3925 aaPredicted RBP5.47□□□□□ -1.53
SMU1-201ENST00000397149 LORP23490 312 aaPredicted RBP5.45□□□□□ -1.54
SMU1-201ENST00000397149 LCE3AQ5TA76 89 aa5.43□□□□□ -1.54
SMU1-201ENST00000397149 FBN1P35555 2871 aaKnown RBP5.41□□□□□ -1.54
SMU1-201ENST00000397149 KRTAP8-1Q8IUC2 63 aa5.35□□□□□ -1.55
SMU1-201ENST00000397149 SRRM2Q9UQ35 2752 aaKnown RBP5.35□□□□□ -1.55
SMU1-201ENST00000397149 HUWE1Q7Z6Z7 4374 aaKnown RBP5.32□□□□□ -1.56
SMU1-201ENST00000397149 OTOGQ6ZRI0 2925 aa5.31□□□□□ -1.56
SMU1-201ENST00000397149 FBN3Q75N90 2809 aa5.22□□□□□ -1.57
SMU1-201ENST00000397149 KRTAP3-2Q9BYR7 98 aa5.18□□□□□ -1.58
SMU1-201ENST00000397149 KRTAP3-3Q9BYR6 98 aa5.15□□□□□ -1.58
SMU1-201ENST00000397149 MEGF8Q7Z7M0 2845 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms