RNA–Protein interactions for RNA: ENST00000396987.7

GPAT4-201, Transcript of glycerol-3-phosphate acyltransferase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPAT4, Length 6,298 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAT4-201ENST00000396987 COL6A5A8TX70 2615 aa7.91□□□□□ -1.14
GPAT4-201ENST00000396987 SETXQ7Z333 2677 aaKnown RBP7.9□□□□□ -1.14
GPAT4-201ENST00000396987 STAB1Q9NY15 2570 aa7.9□□□□□ -1.14
GPAT4-201ENST00000396987 LRBAP50851 2863 aa7.89□□□□□ -1.15
GPAT4-201ENST00000396987 UNC79Q9P2D8 2635 aa7.88□□□□□ -1.15
GPAT4-201ENST00000396987 PRO2289Q9P1D8 64 aa7.87□□□□□ -1.15
GPAT4-201ENST00000396987 KALRNO60229 2985 aa7.86□□□□□ -1.15
GPAT4-201ENST00000396987 BAHCC1Q9P281 2608 aa7.85□□□□□ -1.15
GPAT4-201ENST00000396987 STAB2Q8WWQ8 2551 aa7.85□□□□□ -1.15
GPAT4-201ENST00000396987 MUC3AQ02505 3323 aa7.85□□□□□ -1.15
GPAT4-201ENST00000396987 ADGRG4Q8IZF6 3080 aa7.84□□□□□ -1.15
GPAT4-201ENST00000396987 DMXL1Q9Y485 3027 aa7.84□□□□□ -1.15
GPAT4-201ENST00000396987 MAP1AP78559 2803 aaPredicted RBP7.83□□□□□ -1.16
GPAT4-201ENST00000396987 GCN1Q92616 2671 aaKnown RBP7.82□□□□□ -1.16
GPAT4-201ENST00000396987 DMXL2Q8TDJ6 3036 aa7.82□□□□□ -1.16
GPAT4-201ENST00000396987 CSMD1Q96PZ7 3565 aa7.81□□□□□ -1.16
GPAT4-201ENST00000396987 RELNP78509 3460 aa7.8□□□□□ -1.16
GPAT4-201ENST00000396987 SMG1Q96Q15 3661 aaKnown RBP7.79□□□□□ -1.16
GPAT4-201ENST00000396987 NOTCH1P46531 2555 aa7.78□□□□□ -1.16
GPAT4-201ENST00000396987 NBEAL1Q6ZS30 2694 aa7.77□□□□□ -1.17
GPAT4-201ENST00000396987 KRTAP10-10P60014 251 aa7.76□□□□□ -1.17
GPAT4-201ENST00000396987 COL12A1Q99715 3063 aa7.75□□□□□ -1.17
GPAT4-201ENST00000396987 ATMQ13315 3056 aa7.74□□□□□ -1.17
GPAT4-201ENST00000396987 KRTAP12-2P59991 146 aa7.72□□□□□ -1.17
GPAT4-201ENST00000396987 NBEAL2Q6ZNJ1 2754 aa7.72□□□□□ -1.17
GPAT4-201ENST00000396987 UBR5O95071 2799 aaPredicted RBP7.7□□□□□ -1.18
GPAT4-201ENST00000396987 TACC2O95359 2948 aa7.69□□□□□ -1.18
GPAT4-201ENST00000396987 H0YAA0 97 aa7.67□□□□□ -1.18
GPAT4-201ENST00000396987 ITPR2Q14571 2701 aa7.66□□□□□ -1.18
GPAT4-201ENST00000396987 Q6ZRN7 208 aaPredicted RBP7.66□□□□□ -1.18
GPAT4-201ENST00000396987 RPS29P62273 56 aaKnown RBP7.66□□□□□ -1.18
GPAT4-201ENST00000396987 SVEP1Q4LDE5 3571 aa7.65□□□□□ -1.19
GPAT4-201ENST00000396987 ITPR1Q14643 2758 aa7.62□□□□□ -1.19
GPAT4-201ENST00000396987 ZZEF1O43149 2961 aa7.61□□□□□ -1.19
GPAT4-201ENST00000396987 KRTAP7-1Q8IUC3 87 aa7.61□□□□□ -1.19
GPAT4-201ENST00000396987 FLNCQ14315 2725 aa7.56□□□□□ -1.2
GPAT4-201ENST00000396987 NSD1Q96L73 2696 aaPredicted RBP7.54□□□□□ -1.2
GPAT4-201ENST00000396987 KRTAP13-2Q52LG2 175 aa7.51□□□□□ -1.21
GPAT4-201ENST00000396987 UTP20O75691 2785 aaKnown RBP7.5□□□□□ -1.21
GPAT4-201ENST00000396987 KRTAP21-3Q3LHN1 58 aa7.49□□□□□ -1.21
GPAT4-201ENST00000396987 SPENQ96T58 3664 aaKnown RBP7.49□□□□□ -1.21
GPAT4-201ENST00000396987 KRTAP15-1Q3LI76 137 aa7.48□□□□□ -1.21
GPAT4-201ENST00000396987 HIVEP1P15822 2718 aa7.46□□□□□ -1.22
GPAT4-201ENST00000396987 ASH1LQ9NR48 2969 aaKnown RBP7.43□□□□□ -1.22
GPAT4-201ENST00000396987 KMT2BQ9UMN6 2715 aaPredicted RBP7.43□□□□□ -1.22
GPAT4-201ENST00000396987 CRCT1Q9UGL9 99 aa7.43□□□□□ -1.22
GPAT4-201ENST00000396987 CUBNO60494 3623 aa7.43□□□□□ -1.22
GPAT4-201ENST00000396987 KRTAP13-1Q8IUC0 172 aa7.41□□□□□ -1.22
GPAT4-201ENST00000396987 CRYBG3Q68DQ2 2970 aa7.39□□□□□ -1.23
GPAT4-201ENST00000396987 INE1O15225 51 aa7.38□□□□□ -1.23
GPAT4-201ENST00000396987 APCP25054 2843 aa7.36□□□□□ -1.23
GPAT4-201ENST00000396987 NBPF19A0A087WUL8 3843 aa7.31□□□□□ -1.24
GPAT4-201ENST00000396987 XP32Q5T750 250 aa7.31□□□□□ -1.24
GPAT4-201ENST00000396987 TENM4Q6N022 2769 aa7.3□□□□□ -1.24
GPAT4-201ENST00000396987 BSNQ9UPA5 3926 aa7.3□□□□□ -1.24
GPAT4-201ENST00000396987 HRNRQ86YZ3 2850 aaPredicted RBP7.29□□□□□ -1.24
GPAT4-201ENST00000396987 ZFHX3Q15911 3703 aa7.28□□□□□ -1.24
GPAT4-201ENST00000396987 CELSR1Q9NYQ6 3014 aa7.25□□□□□ -1.25
GPAT4-201ENST00000396987 KRTAP13-4Q3LI77 160 aa7.23□□□□□ -1.25
GPAT4-201ENST00000396987 CELSR2Q9HCU4 2923 aa7.22□□□□□ -1.25
GPAT4-201ENST00000396987 DCHS2Q6V1P9 2916 aa7.22□□□□□ -1.25
GPAT4-201ENST00000396987 CSMD2Q7Z408 3487 aa7.2□□□□□ -1.26
GPAT4-201ENST00000396987 NIPBLQ6KC79 2804 aaeCLIP7.2□□□□□ -1.26
GPAT4-201ENST00000396987 VPS13CQ709C8 3753 aa7.19□□□□□ -1.26
GPAT4-201ENST00000396987 ZANQ9Y493 2812 aa7.16□□□□□ -1.26
GPAT4-201ENST00000396987 TPRXLQ17RH7 258 aa7.14□□□□□ -1.27
GPAT4-201ENST00000396987 FBN2P35556 2912 aa7.13□□□□□ -1.27
GPAT4-201ENST00000396987 KRTAP1-4P0C5Y4 121 aa7.1□□□□□ -1.27
GPAT4-201ENST00000396987 KRTAP10-6P60371 365 aaPredicted RBP7.03□□□□□ -1.28
GPAT4-201ENST00000396987 NF1P21359 2839 aa7□□□□□ -1.29
GPAT4-201ENST00000396987 KRTAP12-1P59990 96 aa6.93□□□□□ -1.3
GPAT4-201ENST00000396987 KRTAP13-3Q3SY46 172 aa6.9□□□□□ -1.3
GPAT4-201ENST00000396987 TENM2Q9NT68 2774 aa6.88□□□□□ -1.31
GPAT4-201ENST00000396987 TENM1Q9UKZ4 2725 aa6.87□□□□□ -1.31
GPAT4-201ENST00000396987 KRTAP10-5P60370 271 aa6.86□□□□□ -1.31
GPAT4-201ENST00000396987 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
GPAT4-201ENST00000396987 MXRA5Q9NR99 2828 aa6.82□□□□□ -1.32
GPAT4-201ENST00000396987 TENM3Q9P273 2699 aa6.79□□□□□ -1.32
GPAT4-201ENST00000396987 KRTAP10-7P60409 375 aaPredicted RBP6.77□□□□□ -1.32
GPAT4-201ENST00000396987 ANK3Q12955 4377 aaKnown RBP6.71□□□□□ -1.34
GPAT4-201ENST00000396987 ZNF469Q96JG9 3925 aaPredicted RBP6.71□□□□□ -1.34
GPAT4-201ENST00000396987 PDZD2O15018 2839 aa6.7□□□□□ -1.34
GPAT4-201ENST00000396987 TRRAPQ9Y4A5 3859 aa6.7□□□□□ -1.34
GPAT4-201ENST00000396987 PKD1L1Q8TDX9 2849 aa6.68□□□□□ -1.34
GPAT4-201ENST00000396987 AKAP9Q99996 3911 aa6.64□□□□□ -1.35
GPAT4-201ENST00000396987 KRTAP10-12P60413 245 aa6.62□□□□□ -1.35
GPAT4-201ENST00000396987 VWFP04275 2813 aa6.58□□□□□ -1.36
GPAT4-201ENST00000396987 TGP01266 2768 aa6.56□□□□□ -1.36
GPAT4-201ENST00000396987 KRTAP3-1Q9BYR8 98 aa6.55□□□□□ -1.36
GPAT4-201ENST00000396987 OTOGQ6ZRI0 2925 aa6.55□□□□□ -1.36
GPAT4-201ENST00000396987 CSMD3Q7Z407 3707 aa6.54□□□□□ -1.36
GPAT4-201ENST00000396987 FBN1P35555 2871 aaKnown RBP6.49□□□□□ -1.37
GPAT4-201ENST00000396987 KRTAP12-3P60328 96 aa6.45□□□□□ -1.38
GPAT4-201ENST00000396987 LCE3AQ5TA76 89 aa6.29□□□□□ -1.4
GPAT4-201ENST00000396987 HUWE1Q7Z6Z7 4374 aaKnown RBP6.27□□□□□ -1.41
GPAT4-201ENST00000396987 SRRM2Q9UQ35 2752 aaKnown RBP6.2□□□□□ -1.42
GPAT4-201ENST00000396987 KRTAP10-4P60372 401 aaPredicted RBP6.19□□□□□ -1.42
GPAT4-201ENST00000396987 FBN3Q75N90 2809 aa6.19□□□□□ -1.42
GPAT4-201ENST00000396987 MT1HL1P0DM35 61 aa6.18□□□□□ -1.42
GPAT4-201ENST00000396987 KRTAP3-2Q9BYR7 98 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms