RNA–Protein interactions for RNA: ENST00000396987.7

GPAT4-201, Transcript of glycerol-3-phosphate acyltransferase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPAT4, Length 6,298 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAT4-201ENST00000396987 PELP1Q8IZL8 1130 aaKnown RBP24.23■■□□□ 1.47
GPAT4-201ENST00000396987 ERICH6Q7L0X2 663 aa23.7■■□□□ 1.39
GPAT4-201ENST00000396987 MYT1Q01538 1121 aa23.68■■□□□ 1.38
GPAT4-201ENST00000396987 DCAF8L2P0C7V8 631 aa23.2■■□□□ 1.3
GPAT4-201ENST00000396987 CCER1Q8TC90 406 aaPredicted RBP23.08■■□□□ 1.29
GPAT4-201ENST00000396987 YTHDC1Q96MU7 727 aaKnown RBP22.3■■□□□ 1.16
GPAT4-201ENST00000396987 TTBK1Q5TCY1 1321 aaPredicted RBP22.24■■□□□ 1.15
GPAT4-201ENST00000396987 NISCHQ9Y2I1 1504 aa22.23■■□□□ 1.15
GPAT4-201ENST00000396987 EHMT2Q96KQ7 1210 aa22.23■■□□□ 1.15
GPAT4-201ENST00000396987 DAXXQ9UER7 740 aaPredicted RBP22.16■■□□□ 1.14
GPAT4-201ENST00000396987 CENPBP07199 599 aaPredicted RBP22.11■■□□□ 1.13
GPAT4-201ENST00000396987 NEFLP07196 543 aa22.03■■□□□ 1.12
GPAT4-201ENST00000396987 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
GPAT4-201ENST00000396987 APLP2Q06481 763 aa21.75■■□□□ 1.07
GPAT4-201ENST00000396987 SHROOM4Q9ULL8 1493 aa21.56■■□□□ 1.04
GPAT4-201ENST00000396987 RTL5Q5HYW3 569 aaPredicted RBP21.56■■□□□ 1.04
GPAT4-201ENST00000396987 ZNF316A6NFI3 1004 aaPredicted RBP21.49■■□□□ 1.03
GPAT4-201ENST00000396987 RANGAP1P46060 587 aaPredicted RBP21.49■■□□□ 1.03
GPAT4-201ENST00000396987 PCGF6Q9BYE7 350 aa21.41■■□□□ 1.02
GPAT4-201ENST00000396987 FAM9AQ8IZU1 332 aaPredicted RBP21.31■■□□□ 1
GPAT4-201ENST00000396987 EIF5BO60841 1220 aaKnown RBP21.2■□□□□ 0.98
GPAT4-201ENST00000396987 CLSPNQ9HAW4 1339 aa21.19■□□□□ 0.98
GPAT4-201ENST00000396987 GLIPR1L2Q4G1C9 344 aa20.96■□□□□ 0.95
GPAT4-201ENST00000396987 POLR3GLQ9BT43 218 aa20.95■□□□□ 0.94
GPAT4-201ENST00000396987 ATP1B4Q9UN42 357 aaPredicted RBP20.92■□□□□ 0.94
GPAT4-201ENST00000396987 CNGB1Q14028 1251 aaPredicted RBP20.9■□□□□ 0.94
GPAT4-201ENST00000396987 ZEB1P37275 1124 aaPredicted RBP20.79■□□□□ 0.92
GPAT4-201ENST00000396987 SLC4A1APQ9BWU0 796 aaKnown RBP20.68■□□□□ 0.9
GPAT4-201ENST00000396987 BCL11AQ9H165 835 aa20.67■□□□□ 0.9
GPAT4-201ENST00000396987 ZBTB47Q9UFB7 747 aaPredicted RBP20.54■□□□□ 0.88
GPAT4-201ENST00000396987 ANP32BQ92688 251 aaKnown RBP20.48■□□□□ 0.87
GPAT4-201ENST00000396987 CHIC1Q5VXU3 224 aa20.47■□□□□ 0.87
GPAT4-201ENST00000396987 MYT1LQ9UL68 1186 aa20.46■□□□□ 0.87
GPAT4-201ENST00000396987 CDK11BP21127 795 aaKnown RBP20.33■□□□□ 0.85
GPAT4-201ENST00000396987 CDK11AQ9UQ88 783 aaPredicted RBP20.33■□□□□ 0.85
GPAT4-201ENST00000396987 BCANQ96GW7 911 aa20.33■□□□□ 0.84
GPAT4-201ENST00000396987 SLC24A1O60721 1099 aa20.32■□□□□ 0.84
GPAT4-201ENST00000396987 AMER1Q5JTC6 1135 aaPredicted RBP20.3■□□□□ 0.84
GPAT4-201ENST00000396987 HRCP23327 699 aa20.23■□□□□ 0.83
GPAT4-201ENST00000396987 TRIM41Q8WV44 630 aa20.19■□□□□ 0.82
GPAT4-201ENST00000396987 TNNT2P45379 298 aaPredicted RBP20.17■□□□□ 0.82
GPAT4-201ENST00000396987 ARXQ96QS3 562 aa20.16■□□□□ 0.82
GPAT4-201ENST00000396987 NPM2Q86SE8 214 aaKnown RBP20.13■□□□□ 0.81
GPAT4-201ENST00000396987 HSP90AA1P07900 732 aaKnown RBP20.06■□□□□ 0.8
GPAT4-201ENST00000396987 CANXP27824 592 aaKnown RBP20.04■□□□□ 0.8
GPAT4-201ENST00000396987 ANP32AP39687 249 aaKnown RBP20.03■□□□□ 0.8
GPAT4-201ENST00000396987 UBTFP17480 764 aaKnown RBP19.98■□□□□ 0.79
GPAT4-201ENST00000396987 ITGAEP38570 1179 aa19.96■□□□□ 0.79
GPAT4-201ENST00000396987 PPARGC1BQ86YN6 1023 aaKnown RBP19.96■□□□□ 0.79
GPAT4-201ENST00000396987 NCBP3Q53F19 620 aaKnown RBP19.9■□□□□ 0.78
GPAT4-201ENST00000396987 TULP1O00294 542 aaPredicted RBP19.83■□□□□ 0.77
GPAT4-201ENST00000396987 TRIM26Q12899 539 aaPredicted RBP19.83■□□□□ 0.76
GPAT4-201ENST00000396987 NBR1Q14596 966 aa19.79■□□□□ 0.76
GPAT4-201ENST00000396987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.78■□□□□ 0.76
GPAT4-201ENST00000396987 HNRNPUL2Q1KMD3 747 aaKnown RBP19.78■□□□□ 0.76
GPAT4-201ENST00000396987 GTF3C3Q9Y5Q9 886 aa19.69■□□□□ 0.74
GPAT4-201ENST00000396987 TRIM44Q96DX7 344 aaPredicted RBP19.67■□□□□ 0.74
GPAT4-201ENST00000396987 CALRP27797 417 aaKnown RBP19.66■□□□□ 0.74
GPAT4-201ENST00000396987 ZNF326Q5BKZ1 582 aaKnown RBP19.62■□□□□ 0.73
GPAT4-201ENST00000396987 DNTTIP2Q5QJE6 756 aaKnown RBP19.61■□□□□ 0.73
GPAT4-201ENST00000396987 NEFMP07197 916 aa19.6■□□□□ 0.73
GPAT4-201ENST00000396987 UPF2Q9HAU5 1272 aaKnown RBP19.6■□□□□ 0.73
GPAT4-201ENST00000396987 NAP1L5Q96NT1 182 aaPredicted RBP19.52■□□□□ 0.72
GPAT4-201ENST00000396987 DIEXFQ68CQ4 756 aaKnown RBP19.52■□□□□ 0.71
GPAT4-201ENST00000396987 PTMAP06454 111 aaKnown RBP19.5■□□□□ 0.71
GPAT4-201ENST00000396987 PRM3Q9NNZ6 103 aa19.44■□□□□ 0.7
GPAT4-201ENST00000396987 TPRNQ4KMQ1 711 aa19.42■□□□□ 0.7
GPAT4-201ENST00000396987 ABCC9O60706 1549 aa19.41■□□□□ 0.7
GPAT4-201ENST00000396987 TNNT3P45378 269 aaPredicted RBP19.39■□□□□ 0.69
GPAT4-201ENST00000396987 RTN4Q9NQC3 1192 aaKnown RBP19.39■□□□□ 0.69
GPAT4-201ENST00000396987 NCLP19338 710 aaKnown RBP19.38■□□□□ 0.69
GPAT4-201ENST00000396987 ZRSR1Q15695 479 aaKnown RBP19.36■□□□□ 0.69
GPAT4-201ENST00000396987 ANP32CO43423 234 aa19.36■□□□□ 0.69
GPAT4-201ENST00000396987 PABPN1Q86U42 306 aaKnown RBP eCLIP19.34■□□□□ 0.691e-5■□□□□ 8.6
GPAT4-201ENST00000396987 LOC105371045A0A1W2PR82 267 aa19.33■□□□□ 0.69
GPAT4-201ENST00000396987 CLSTN1O94985 981 aa19.24■□□□□ 0.67
GPAT4-201ENST00000396987 ARID4BQ4LE39 1312 aaPredicted RBP19.23■□□□□ 0.67
GPAT4-201ENST00000396987 PLCB2Q00722 1185 aa19.23■□□□□ 0.67
GPAT4-201ENST00000396987 ACIN1Q9UKV3 1341 aaKnown RBP19.22■□□□□ 0.67
GPAT4-201ENST00000396987 NEUROD1Q13562 356 aa19.21■□□□□ 0.67
GPAT4-201ENST00000396987 TRIM52Q96A61 297 aa19.2■□□□□ 0.66
GPAT4-201ENST00000396987 TAOK2Q9UL54 1235 aa19.16■□□□□ 0.66
GPAT4-201ENST00000396987 ARID3AQ99856 593 aa19.16■□□□□ 0.66
GPAT4-201ENST00000396987 FBXO3Q9UK99 471 aa19.15■□□□□ 0.66
GPAT4-201ENST00000396987 ERICH6BQ5W0A0 696 aa19.14■□□□□ 0.65
GPAT4-201ENST00000396987 A0A0G2JS52 829 aa19.12■□□□□ 0.65
GPAT4-201ENST00000396987 GOLGA6L22H0YM25 854 aa19.12■□□□□ 0.65
GPAT4-201ENST00000396987 NOC3LQ8WTT2 800 aaKnown RBP19.11■□□□□ 0.65
GPAT4-201ENST00000396987 FKBP8Q14318 412 aa19.1■□□□□ 0.65
GPAT4-201ENST00000396987 GOLGA6L6A8MZA4 724 aa19.09■□□□□ 0.65
GPAT4-201ENST00000396987 APPP05067 770 aa19.09■□□□□ 0.65
GPAT4-201ENST00000396987 PDE4CQ08493 712 aa19.04■□□□□ 0.64
GPAT4-201ENST00000396987 ANP32EQ9BTT0 268 aa19.03■□□□□ 0.64
GPAT4-201ENST00000396987 PNNQ9H307 717 aaKnown RBP19.03■□□□□ 0.64
GPAT4-201ENST00000396987 CHAF1AQ13111 956 aaPredicted RBP19.02■□□□□ 0.64
GPAT4-201ENST00000396987 ZBTB7CA1YPR0 619 aa19.02■□□□□ 0.64
GPAT4-201ENST00000396987 A0A0U1RQG5 324 aaPredicted RBP19■□□□□ 0.63
GPAT4-201ENST00000396987 PATL2C9JE40 543 aaKnown RBP19■□□□□ 0.63
GPAT4-201ENST00000396987 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.98■□□□□ 0.63
GPAT4-201ENST00000396987 SALL2Q9Y467 1007 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms