RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 C9orf92A6NGG3 77 aa6.99□□□□□ -1.29
ATN1-202ENST00000396684 A8MUN3 132 aa6.98□□□□□ -1.29
ATN1-202ENST00000396684 J3QL48 77 aa6.95□□□□□ -1.3
ATN1-202ENST00000396684 OXTP01178 125 aa6.95□□□□□ -1.3
ATN1-202ENST00000396684 KRTAP13-2Q52LG2 175 aa6.95□□□□□ -1.3
ATN1-202ENST00000396684 Q5XG85 94 aa6.95□□□□□ -1.3
ATN1-202ENST00000396684 COL7A1Q02388 2944 aa6.93□□□□□ -1.3
ATN1-202ENST00000396684 DMBT1Q9UGM3 2413 aaPredicted RBP6.93□□□□□ -1.3
ATN1-202ENST00000396684 ATP11AUNQ6ZP68 121 aa6.92□□□□□ -1.3
ATN1-202ENST00000396684 C7orf65Q6ZTY9 151 aa6.9□□□□□ -1.3
ATN1-202ENST00000396684 KRTAP29-1A8MX34 341 aaPredicted RBP6.9□□□□□ -1.3
ATN1-202ENST00000396684 ASB16-AS1Q495Z4 193 aa6.9□□□□□ -1.31
ATN1-202ENST00000396684 DNAH9Q9NYC9 4486 aa6.9□□□□□ -1.31
ATN1-202ENST00000396684 ACYP2P14621 99 aa6.9□□□□□ -1.31
ATN1-202ENST00000396684 FLG2Q5D862 2391 aaPredicted RBP6.87□□□□□ -1.31
ATN1-202ENST00000396684 IGLV7-46A0A075B6I9 117 aa6.85□□□□□ -1.31
ATN1-202ENST00000396684 KRTAP1-4P0C5Y4 121 aa6.85□□□□□ -1.31
ATN1-202ENST00000396684 SPANXA2-OT1Q8N9U9 137 aa6.85□□□□□ -1.31
ATN1-202ENST00000396684 NOTCH2NLQ7Z3S9 236 aa6.84□□□□□ -1.31
ATN1-202ENST00000396684 ANK2Q01484 3957 aa6.83□□□□□ -1.32
ATN1-202ENST00000396684 A0A1B0GVY2 172 aa6.83□□□□□ -1.32
ATN1-202ENST00000396684 RPS29P62273 56 aaKnown RBP6.83□□□□□ -1.32
ATN1-202ENST00000396684 FP248Q71RG6 208 aaPredicted RBP6.83□□□□□ -1.32
ATN1-202ENST00000396684 COA5Q86WW8 74 aa6.81□□□□□ -1.32
ATN1-202ENST00000396684 ZCCHC13Q8WW36 166 aaKnown RBP6.79□□□□□ -1.32
ATN1-202ENST00000396684 Q5W150 140 aa6.78□□□□□ -1.32
ATN1-202ENST00000396684 CYP4F30PQ9H0H9 118 aa6.77□□□□□ -1.33
ATN1-202ENST00000396684 Q8N9P0 234 aaPredicted RBP6.76□□□□□ -1.33
ATN1-202ENST00000396684 SRRM2Q9UQ35 2752 aaKnown RBP6.74□□□□□ -1.33
ATN1-202ENST00000396684 HRES1P13985 223 aa6.74□□□□□ -1.33
ATN1-202ENST00000396684 Q8N1X5 172 aa6.74□□□□□ -1.33
ATN1-202ENST00000396684 DNHD1Q96M86 4753 aa6.73□□□□□ -1.33
ATN1-202ENST00000396684 DNAH3Q8TD57 4116 aa6.71□□□□□ -1.33
ATN1-202ENST00000396684 PLECQ15149 4684 aaKnown RBP6.7□□□□□ -1.34
ATN1-202ENST00000396684 Q1T7F1 81 aa6.7□□□□□ -1.34
ATN1-202ENST00000396684 A0A1B0GU69 56 aa6.69□□□□□ -1.34
ATN1-202ENST00000396684 PRKDCP78527 4128 aaKnown RBP6.68□□□□□ -1.34
ATN1-202ENST00000396684 CMYA5Q8N3K9 4069 aa6.68□□□□□ -1.34
ATN1-202ENST00000396684 KTN1-AS1Q86SY8 53 aa6.66□□□□□ -1.34
ATN1-202ENST00000396684 SPINK7P58062 85 aa6.65□□□□□ -1.34
ATN1-202ENST00000396684 RBM12B-AS1Q9P1G2 102 aa6.64□□□□□ -1.35
ATN1-202ENST00000396684 STARD9Q9P2P6 4700 aa6.63□□□□□ -1.35
ATN1-202ENST00000396684 K7ERS5 55 aa6.62□□□□□ -1.35
ATN1-202ENST00000396684 PRAC1Q96KF2 57 aa6.6□□□□□ -1.35
ATN1-202ENST00000396684 CSMD3Q7Z407 3707 aa6.6□□□□□ -1.35
ATN1-202ENST00000396684 VPS13DQ5THJ4 4388 aa6.59□□□□□ -1.36
ATN1-202ENST00000396684 Q75L30 129 aa6.56□□□□□ -1.36
ATN1-202ENST00000396684 DMAC1Q96GE9 116 aa6.56□□□□□ -1.36
ATN1-202ENST00000396684 DNAH10Q8IVF4 4471 aa6.55□□□□□ -1.36
ATN1-202ENST00000396684 DNAH1Q9P2D7 4330 aa6.55□□□□□ -1.36
ATN1-202ENST00000396684 LCA10Q71F78 164 aa6.54□□□□□ -1.36
ATN1-202ENST00000396684 ALMS1Q8TCU4 4167 aa6.54□□□□□ -1.36
ATN1-202ENST00000396684 COX6B2Q6YFQ2 88 aa6.53□□□□□ -1.36
ATN1-202ENST00000396684 A8MUU9 505 aa6.53□□□□□ -1.36
ATN1-202ENST00000396684 C20orf166-AS1Q96NR2 134 aa6.53□□□□□ -1.36
ATN1-202ENST00000396684 A8MU10 97 aa6.53□□□□□ -1.36
ATN1-202ENST00000396684 H3BS24 57 aa6.52□□□□□ -1.37
ATN1-202ENST00000396684 SEC61BP60468 96 aaKnown RBP6.52□□□□□ -1.37
ATN1-202ENST00000396684 KRTAP10-8P60410 259 aa6.52□□□□□ -1.37
ATN1-202ENST00000396684 KRTAP16-1A8MUX0 517 aa6.51□□□□□ -1.37
ATN1-202ENST00000396684 Q5VV11 94 aa6.5□□□□□ -1.37
ATN1-202ENST00000396684 RPL37P61927 97 aaKnown RBP6.49□□□□□ -1.37
ATN1-202ENST00000396684 CDC42SE1Q9NRR8 79 aa6.48□□□□□ -1.37
ATN1-202ENST00000396684 UQCR11O14957 56 aa6.47□□□□□ -1.37
ATN1-202ENST00000396684 LINC01558Q9Y6Z2 57 aa6.46□□□□□ -1.38
ATN1-202ENST00000396684 MIR22HGQ0VDD5 57 aa6.45□□□□□ -1.38
ATN1-202ENST00000396684 KRTAP10-4P60372 401 aaPredicted RBP6.44□□□□□ -1.38
ATN1-202ENST00000396684 SPINT4Q6UDR6 99 aa6.43□□□□□ -1.38
ATN1-202ENST00000396684 XP32Q5T750 250 aa6.42□□□□□ -1.38
ATN1-202ENST00000396684 DNAH17Q9UFH2 4485 aa6.41□□□□□ -1.38
ATN1-202ENST00000396684 DNAH11Q96DT5 4516 aa6.4□□□□□ -1.38
ATN1-202ENST00000396684 S4R3F8 94 aa6.4□□□□□ -1.38
ATN1-202ENST00000396684 KMT2AQ03164 3969 aa6.4□□□□□ -1.39
ATN1-202ENST00000396684 DYNC2H1Q8NCM8 4307 aaKnown RBP6.39□□□□□ -1.39
ATN1-202ENST00000396684 LINC01554Q52M75 96 aa6.38□□□□□ -1.39
ATN1-202ENST00000396684 LYSTQ99698 3801 aa6.38□□□□□ -1.39
ATN1-202ENST00000396684 KRTAP13-3Q3SY46 172 aa6.37□□□□□ -1.39
ATN1-202ENST00000396684 CRIPTQ9P021 101 aa6.36□□□□□ -1.39
ATN1-202ENST00000396684 TPRXLQ17RH7 258 aa6.36□□□□□ -1.39
ATN1-202ENST00000396684 DNAH5Q8TE73 4624 aa6.35□□□□□ -1.39
ATN1-202ENST00000396684 CSAG1Q6PB30 78 aa6.35□□□□□ -1.39
ATN1-202ENST00000396684 DNAH7Q8WXX0 4024 aa6.32□□□□□ -1.4
ATN1-202ENST00000396684 A0A1B0GU33 70 aa6.31□□□□□ -1.4
ATN1-202ENST00000396684 ADM2Q7Z4H4 148 aa6.29□□□□□ -1.4
ATN1-202ENST00000396684 DNAH2Q9P225 4427 aa6.29□□□□□ -1.4
ATN1-202ENST00000396684 H1FX-AS1Q4G0G2 97 aa6.28□□□□□ -1.4
ATN1-202ENST00000396684 MT1HL1P0DM35 61 aa6.26□□□□□ -1.41
ATN1-202ENST00000396684 DYNC1H1Q14204 4646 aaKnown RBP6.25□□□□□ -1.41
ATN1-202ENST00000396684 A0A0D9SG42 100 aa6.24□□□□□ -1.41
ATN1-202ENST00000396684 LRP1BQ9NZR2 4599 aa6.24□□□□□ -1.41
ATN1-202ENST00000396684 A6NN06 94 aa6.2□□□□□ -1.42
ATN1-202ENST00000396684 M0R2T5 61 aa6.19□□□□□ -1.42
ATN1-202ENST00000396684 KRTAP4-5Q9BYR2 181 aa6.19□□□□□ -1.42
ATN1-202ENST00000396684 DNAH6Q9C0G6 4158 aa6.18□□□□□ -1.42
ATN1-202ENST00000396684 FAT1Q14517 4588 aa6.17□□□□□ -1.42
ATN1-202ENST00000396684 SACSQ9NZJ4 4579 aa6.16□□□□□ -1.42
ATN1-202ENST00000396684 HYDINQ4G0P3 5121 aa6.16□□□□□ -1.42
ATN1-202ENST00000396684 DNAH8Q96JB1 4490 aa6.15□□□□□ -1.43
ATN1-202ENST00000396684 HECTD4Q9Y4D8 3996 aa6.15□□□□□ -1.43
ATN1-202ENST00000396684 FAT2Q9NYQ8 4349 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms