RNA–Protein interactions for RNA: ENST00000396193.5

PDE1C-206, Transcript of phosphodiesterase 1C, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PDE1C, Length 5,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-206ENST00000396193 HIVEP1P15822 2718 aa10.21□□□□□ -0.78
PDE1C-206ENST00000396193 KRTAP13-1Q8IUC0 172 aa10.19□□□□□ -0.78
PDE1C-206ENST00000396193 NIPBLQ6KC79 2804 aaeCLIP10.17□□□□□ -0.78
PDE1C-206ENST00000396193 CELSR2Q9HCU4 2923 aa10.17□□□□□ -0.78
PDE1C-206ENST00000396193 Q6ZRN7 208 aaPredicted RBP10.15□□□□□ -0.78
PDE1C-206ENST00000396193 REV3LO60673 3130 aa10.12□□□□□ -0.79
PDE1C-206ENST00000396193 ZANQ9Y493 2812 aa10.11□□□□□ -0.79
PDE1C-206ENST00000396193 SPEGQ15772 3267 aa10.11□□□□□ -0.79
PDE1C-206ENST00000396193 M0QZ58 72 aa10.09□□□□□ -0.79
PDE1C-206ENST00000396193 NDUFAF8A1L188 74 aa10.08□□□□□ -0.8
PDE1C-206ENST00000396193 KRTAP13-2Q52LG2 175 aa10.02□□□□□ -0.8
PDE1C-206ENST00000396193 DCHS2Q6V1P9 2916 aa10□□□□□ -0.81
PDE1C-206ENST00000396193 A8MUU9 505 aa9.97□□□□□ -0.81
PDE1C-206ENST00000396193 RPS29P62273 56 aaKnown RBP9.97□□□□□ -0.81
PDE1C-206ENST00000396193 KMT2BQ9UMN6 2715 aaPredicted RBP9.95□□□□□ -0.82
PDE1C-206ENST00000396193 Q5VSD8 79 aa9.95□□□□□ -0.82
PDE1C-206ENST00000396193 SEC61BP60468 96 aaKnown RBP9.93□□□□□ -0.82
PDE1C-206ENST00000396193 TNRC18O15417 2968 aaPredicted RBP9.92□□□□□ -0.82
PDE1C-206ENST00000396193 HRNRQ86YZ3 2850 aaPredicted RBP9.91□□□□□ -0.82
PDE1C-206ENST00000396193 EYSQ5T1H1 3165 aa9.91□□□□□ -0.82
PDE1C-206ENST00000396193 FBN2P35556 2912 aa9.89□□□□□ -0.83
PDE1C-206ENST00000396193 M0R2T5 61 aa9.88□□□□□ -0.83
PDE1C-206ENST00000396193 NF1P21359 2839 aa9.87□□□□□ -0.83
PDE1C-206ENST00000396193 DMXL1Q9Y485 3027 aa9.86□□□□□ -0.83
PDE1C-206ENST00000396193 LOC400499M0QZD8 3231 aa9.84□□□□□ -0.83
PDE1C-206ENST00000396193 SPTBN5Q9NRC6 3674 aaKnown RBP9.75□□□□□ -0.85
PDE1C-206ENST00000396193 PLAC4Q8WY50 150 aa9.75□□□□□ -0.85
PDE1C-206ENST00000396193 TENM4Q6N022 2769 aa9.74□□□□□ -0.85
PDE1C-206ENST00000396193 USP34Q70CQ2 3546 aa9.72□□□□□ -0.85
PDE1C-206ENST00000396193 C20orf166-AS1Q96NR2 134 aa9.71□□□□□ -0.85
PDE1C-206ENST00000396193 CRYBG3Q68DQ2 2970 aa9.7□□□□□ -0.86
PDE1C-206ENST00000396193 H0YAA0 97 aa9.69□□□□□ -0.86
PDE1C-206ENST00000396193 C10orf95Q9H7T3 257 aa9.62□□□□□ -0.87
PDE1C-206ENST00000396193 MYO15AQ9UKN7 3530 aa9.6□□□□□ -0.87
PDE1C-206ENST00000396193 MXRA5Q9NR99 2828 aa9.6□□□□□ -0.87
PDE1C-206ENST00000396193 KRTAP1-4P0C5Y4 121 aa9.56□□□□□ -0.88
PDE1C-206ENST00000396193 TENM3Q9P273 2699 aa9.52□□□□□ -0.88
PDE1C-206ENST00000396193 P0C880 135 aa9.46□□□□□ -0.89
PDE1C-206ENST00000396193 CELSR1Q9NYQ6 3014 aa9.46□□□□□ -0.9
PDE1C-206ENST00000396193 TGP01266 2768 aa9.46□□□□□ -0.9
PDE1C-206ENST00000396193 TNP1P09430 55 aa9.41□□□□□ -0.9
PDE1C-206ENST00000396193 KRTAP13-3Q3SY46 172 aa9.4□□□□□ -0.9
PDE1C-206ENST00000396193 PP632Q6XCG6 107 aa9.4□□□□□ -0.91
PDE1C-206ENST00000396193 TENM1Q9UKZ4 2725 aa9.38□□□□□ -0.91
PDE1C-206ENST00000396193 DCHS1Q96JQ0 3298 aa9.38□□□□□ -0.91
PDE1C-206ENST00000396193 WDFY3Q8IZQ1 3526 aa9.34□□□□□ -0.91
PDE1C-206ENST00000396193 RELNP78509 3460 aa9.32□□□□□ -0.92
PDE1C-206ENST00000396193 PDZD2O15018 2839 aa9.3□□□□□ -0.92
PDE1C-206ENST00000396193 XP32Q5T750 250 aa9.29□□□□□ -0.92
PDE1C-206ENST00000396193 KRTAP10-8P60410 259 aa9.2□□□□□ -0.94
PDE1C-206ENST00000396193 ZFHX4Q86UP3 3567 aa9.17□□□□□ -0.94
PDE1C-206ENST00000396193 TENM2Q9NT68 2774 aa9.12□□□□□ -0.95
PDE1C-206ENST00000396193 PKD1L1Q8TDX9 2849 aa9.1□□□□□ -0.95
PDE1C-206ENST00000396193 CSMD1Q96PZ7 3565 aa9.1□□□□□ -0.95
PDE1C-206ENST00000396193 ASPMQ8IZT6 3477 aa9.06□□□□□ -0.96
PDE1C-206ENST00000396193 VWFP04275 2813 aa9.01□□□□□ -0.97
PDE1C-206ENST00000396193 LAMA5O15230 3695 aa9□□□□□ -0.97
PDE1C-206ENST00000396193 TPRXLQ17RH7 258 aa8.99□□□□□ -0.97
PDE1C-206ENST00000396193 KRTAP12-2P59991 146 aa8.95□□□□□ -0.98
PDE1C-206ENST00000396193 FBN1P35555 2871 aaKnown RBP8.95□□□□□ -0.98
PDE1C-206ENST00000396193 SMG1Q96Q15 3661 aaKnown RBP8.92□□□□□ -0.98
PDE1C-206ENST00000396193 KRTAP21-3Q3LHN1 58 aa8.9□□□□□ -0.98
PDE1C-206ENST00000396193 A0A1B0GVY2 172 aa8.88□□□□□ -0.99
PDE1C-206ENST00000396193 KRTAP3-1Q9BYR8 98 aa8.88□□□□□ -0.99
PDE1C-206ENST00000396193 KRTAP12-1P59990 96 aa8.83□□□□□ -1
PDE1C-206ENST00000396193 FBN3Q75N90 2809 aa8.79□□□□□ -1
PDE1C-206ENST00000396193 SVEP1Q4LDE5 3571 aa8.75□□□□□ -1.01
PDE1C-206ENST00000396193 CUBNO60494 3623 aa8.71□□□□□ -1.01
PDE1C-206ENST00000396193 SRRM2Q9UQ35 2752 aaKnown RBP8.71□□□□□ -1.02
PDE1C-206ENST00000396193 KRTAP13-4Q3LI77 160 aa8.7□□□□□ -1.02
PDE1C-206ENST00000396193 OTOGQ6ZRI0 2925 aa8.69□□□□□ -1.02
PDE1C-206ENST00000396193 DMDP11532 3685 aa8.69□□□□□ -1.02
PDE1C-206ENST00000396193 KRTAP10-6P60371 365 aaPredicted RBP8.65□□□□□ -1.02
PDE1C-206ENST00000396193 MEGF8Q7Z7M0 2845 aa8.65□□□□□ -1.03
PDE1C-206ENST00000396193 MUC3AQ02505 3323 aa8.64□□□□□ -1.03
PDE1C-206ENST00000396193 KRTAP10-10P60014 251 aa8.6□□□□□ -1.03
PDE1C-206ENST00000396193 KRTAP15-1Q3LI76 137 aa8.56□□□□□ -1.04
PDE1C-206ENST00000396193 NBPF19A0A087WUL8 3843 aa8.56□□□□□ -1.04
PDE1C-206ENST00000396193 COL7A1Q02388 2944 aa8.47□□□□□ -1.05
PDE1C-206ENST00000396193 ZFHX3Q15911 3703 aa8.45□□□□□ -1.06
PDE1C-206ENST00000396193 PRO2289Q9P1D8 64 aa8.43□□□□□ -1.06
PDE1C-206ENST00000396193 CSMD2Q7Z408 3487 aa8.4□□□□□ -1.06
PDE1C-206ENST00000396193 ANK3Q12955 4377 aaKnown RBP8.4□□□□□ -1.06
PDE1C-206ENST00000396193 KRTAP3-2Q9BYR7 98 aa8.36□□□□□ -1.07
PDE1C-206ENST00000396193 TRRAPQ9Y4A5 3859 aa8.36□□□□□ -1.07
PDE1C-206ENST00000396193 SPENQ96T58 3664 aaKnown RBP8.35□□□□□ -1.07
PDE1C-206ENST00000396193 KRTAP3-3Q9BYR6 98 aa8.31□□□□□ -1.08
PDE1C-206ENST00000396193 INE1O15225 51 aa8.16□□□□□ -1.1
PDE1C-206ENST00000396193 BSNQ9UPA5 3926 aa8.08□□□□□ -1.12
PDE1C-206ENST00000396193 MT1HL1P0DM35 61 aa8.04□□□□□ -1.12
PDE1C-206ENST00000396193 KRTAP10-4P60372 401 aaPredicted RBP7.99□□□□□ -1.13
PDE1C-206ENST00000396193 VPS13CQ709C8 3753 aa7.98□□□□□ -1.13
PDE1C-206ENST00000396193 HUWE1Q7Z6Z7 4374 aaKnown RBP7.94□□□□□ -1.14
PDE1C-206ENST00000396193 KRTAP23-1A1A580 65 aa7.81□□□□□ -1.16
PDE1C-206ENST00000396193 CSMD3Q7Z407 3707 aa7.8□□□□□ -1.16
PDE1C-206ENST00000396193 LORP23490 312 aaPredicted RBP7.72□□□□□ -1.17
PDE1C-206ENST00000396193 KRTAP10-12P60413 245 aa7.7□□□□□ -1.18
PDE1C-206ENST00000396193 KRTAP12-3P60328 96 aa7.63□□□□□ -1.19
PDE1C-206ENST00000396193 LCE3AQ5TA76 89 aa7.58□□□□□ -1.2
PDE1C-206ENST00000396193 KRTAP4-5Q9BYR2 181 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms