RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 ATP11AUNQ6ZP68 121 aa10.74□□□□□ -0.69
SREBF1-204ENST00000395756 LINC00472Q9H8W2 130 aa10.73□□□□□ -0.69
SREBF1-204ENST00000395756 A6NN06 94 aa10.73□□□□□ -0.69
SREBF1-204ENST00000395756 ZNF706Q9Y5V0 76 aaPredicted RBP10.73□□□□□ -0.69
SREBF1-204ENST00000395756 LINC00483Q53H64 154 aa10.7□□□□□ -0.7
SREBF1-204ENST00000395756 FAT2Q9NYQ8 4349 aa10.7□□□□□ -0.7
SREBF1-204ENST00000395756 C7orf65Q6ZTY9 151 aa10.68□□□□□ -0.7
SREBF1-204ENST00000395756 ALMS1Q8TCU4 4167 aa10.68□□□□□ -0.7
SREBF1-204ENST00000395756 Q8N9P0 234 aaPredicted RBP10.68□□□□□ -0.7
SREBF1-204ENST00000395756 A8MWP4 228 aa10.67□□□□□ -0.7
SREBF1-204ENST00000395756 CASC2Q6XLA1 102 aa10.67□□□□□ -0.7
SREBF1-204ENST00000395756 SPINK6Q6UWN8 80 aa10.66□□□□□ -0.7
SREBF1-204ENST00000395756 ZCCHC13Q8WW36 166 aaKnown RBP10.66□□□□□ -0.7
SREBF1-204ENST00000395756 PKD1P98161 4303 aa10.65□□□□□ -0.7
SREBF1-204ENST00000395756 CYP4F30PQ9H0H9 118 aa10.65□□□□□ -0.7
SREBF1-204ENST00000395756 PKHD1P08F94 4074 aa10.63□□□□□ -0.71
SREBF1-204ENST00000395756 KRTAP21-3Q3LHN1 58 aa10.63□□□□□ -0.71
SREBF1-204ENST00000395756 LIMD2Q9BT23 127 aa10.63□□□□□ -0.71
SREBF1-204ENST00000395756 IGHV6-1A0A0B4J1U7 121 aa10.62□□□□□ -0.71
SREBF1-204ENST00000395756 NDUFB1O75438 58 aa10.62□□□□□ -0.71
SREBF1-204ENST00000395756 PRAC1Q96KF2 57 aa10.62□□□□□ -0.71
SREBF1-204ENST00000395756 Q96NJ1 140 aa10.61□□□□□ -0.71
SREBF1-204ENST00000395756 SACSQ9NZJ4 4579 aa10.59□□□□□ -0.71
SREBF1-204ENST00000395756 LINC00208Q96KT6 92 aa10.58□□□□□ -0.72
SREBF1-204ENST00000395756 LCE6AA0A183 80 aa10.58□□□□□ -0.72
SREBF1-204ENST00000395756 KRTAP29-1A8MX34 341 aaPredicted RBP10.58□□□□□ -0.72
SREBF1-204ENST00000395756 VPS13BQ7Z7G8 4022 aa10.58□□□□□ -0.72
SREBF1-204ENST00000395756 A0A087X002 238 aa10.57□□□□□ -0.72
SREBF1-204ENST00000395756 CDK2AP2O75956 126 aa10.56□□□□□ -0.72
SREBF1-204ENST00000395756 MMP24-AS1A0A0U1RRL7 71 aa10.54□□□□□ -0.72
SREBF1-204ENST00000395756 Q6ZSA8 131 aa10.54□□□□□ -0.72
SREBF1-204ENST00000395756 NOTCH2NLQ7Z3S9 236 aa10.54□□□□□ -0.72
SREBF1-204ENST00000395756 CDC42SE1Q9NRR8 79 aa10.52□□□□□ -0.72
SREBF1-204ENST00000395756 Q75L30 129 aa10.52□□□□□ -0.73
SREBF1-204ENST00000395756 PRR26Q8N8Z3 221 aa10.52□□□□□ -0.73
SREBF1-204ENST00000395756 MP68P56378 58 aa10.51□□□□□ -0.73
SREBF1-204ENST00000395756 SMR3BP02814 79 aaPredicted RBP10.51□□□□□ -0.73
SREBF1-204ENST00000395756 H0Y9P7 68 aa10.5□□□□□ -0.73
SREBF1-204ENST00000395756 LINC00313P59037 77 aa10.49□□□□□ -0.73
SREBF1-204ENST00000395756 ADM2Q7Z4H4 148 aa10.49□□□□□ -0.73
SREBF1-204ENST00000395756 C8orf17Q9NRJ1 99 aa10.48□□□□□ -0.73
SREBF1-204ENST00000395756 KRTAP13-2Q52LG2 175 aa10.47□□□□□ -0.73
SREBF1-204ENST00000395756 A0A1B0GVX0 72 aa10.47□□□□□ -0.73
SREBF1-204ENST00000395756 LOC101927531A0A1B0GV80 90 aa10.45□□□□□ -0.74
SREBF1-204ENST00000395756 SPAG11AQ6PDA7 123 aa10.45□□□□□ -0.74
SREBF1-204ENST00000395756 KMT2CQ8NEZ4 4911 aaKnown RBP10.43□□□□□ -0.74
SREBF1-204ENST00000395756 SPINK7P58062 85 aa10.43□□□□□ -0.74
SREBF1-204ENST00000395756 SSBP3-AS1Q7Z2R9 100 aa10.43□□□□□ -0.74
SREBF1-204ENST00000395756 PLA2G1BP04054 148 aaKnown RBP10.42□□□□□ -0.74
SREBF1-204ENST00000395756 LINC01554Q52M75 96 aa10.42□□□□□ -0.74
SREBF1-204ENST00000395756 FAT1Q14517 4588 aa10.41□□□□□ -0.74
SREBF1-204ENST00000395756 DYNC1H1Q14204 4646 aaKnown RBP10.41□□□□□ -0.74
SREBF1-204ENST00000395756 COA5Q86WW8 74 aa10.4□□□□□ -0.74
SREBF1-204ENST00000395756 KRTAP1-4P0C5Y4 121 aa10.37□□□□□ -0.75
SREBF1-204ENST00000395756 PCOTHQ58A44 107 aa10.37□□□□□ -0.75
SREBF1-204ENST00000395756 MRPL34Q9BQ48 92 aaKnown RBP10.36□□□□□ -0.75
SREBF1-204ENST00000395756 RETNLBQ9BQ08 111 aa10.33□□□□□ -0.75
SREBF1-204ENST00000395756 TYMSOSQ8TAI1 123 aa10.32□□□□□ -0.76
SREBF1-204ENST00000395756 ASB16-AS1Q495Z4 193 aa10.31□□□□□ -0.76
SREBF1-204ENST00000395756 SPANXA2-OT1Q8N9U9 137 aa10.3□□□□□ -0.76
SREBF1-204ENST00000395756 RYR2Q92736 4967 aa10.28□□□□□ -0.76
SREBF1-204ENST00000395756 TP53AIP1Q9HCN2 124 aa10.27□□□□□ -0.77
SREBF1-204ENST00000395756 Q5W150 140 aa10.25□□□□□ -0.77
SREBF1-204ENST00000395756 LINC01558Q9Y6Z2 57 aa10.23□□□□□ -0.77
SREBF1-204ENST00000395756 H3BPC8 53 aa10.23□□□□□ -0.77
SREBF1-204ENST00000395756 A0A1B0GVY2 172 aa10.21□□□□□ -0.78
SREBF1-204ENST00000395756 APOBP04114 4563 aaKnown RBP10.21□□□□□ -0.78
SREBF1-204ENST00000395756 IGLV7-46A0A075B6I9 117 aa10.14□□□□□ -0.79
SREBF1-204ENST00000395756 LINC00304Q8N9R0 145 aa10.14□□□□□ -0.79
SREBF1-204ENST00000395756 SPINK1P00995 79 aa10.12□□□□□ -0.79
SREBF1-204ENST00000395756 RYR3Q15413 4870 aa10.1□□□□□ -0.79
SREBF1-204ENST00000395756 CSAG1Q6PB30 78 aa10.09□□□□□ -0.79
SREBF1-204ENST00000395756 HRES1P13985 223 aa10.04□□□□□ -0.8
SREBF1-204ENST00000395756 KRTAP13-3Q3SY46 172 aa10.04□□□□□ -0.8
SREBF1-204ENST00000395756 KRTAP10-4P60372 401 aaPredicted RBP10.03□□□□□ -0.8
SREBF1-204ENST00000395756 C9orf92A6NGG3 77 aa10.03□□□□□ -0.8
SREBF1-204ENST00000395756 KRTAP16-1A8MUX0 517 aa10.02□□□□□ -0.8
SREBF1-204ENST00000395756 IGKV2D-30A0A075B6S6 120 aa10.01□□□□□ -0.81
SREBF1-204ENST00000395756 IGKV2-30P06310 120 aa10.01□□□□□ -0.81
SREBF1-204ENST00000395756 LRP1Q07954 4544 aaKnown RBP10.01□□□□□ -0.81
SREBF1-204ENST00000395756 FLG2Q5D862 2391 aaPredicted RBP10.01□□□□□ -0.81
SREBF1-204ENST00000395756 FAM229AH3BQW9 127 aa10.01□□□□□ -0.81
SREBF1-204ENST00000395756 DMBT1Q9UGM3 2413 aaPredicted RBP9.95□□□□□ -0.82
SREBF1-204ENST00000395756 PKHD1L1Q86WI1 4243 aa9.89□□□□□ -0.83
SREBF1-204ENST00000395756 HSPG2P98160 4391 aa9.88□□□□□ -0.83
SREBF1-204ENST00000395756 KIAA1109Q2LD37 5005 aa9.88□□□□□ -0.83
SREBF1-204ENST00000395756 Q5VSD8 79 aa9.87□□□□□ -0.83
SREBF1-204ENST00000395756 Q8N1X5 172 aa9.84□□□□□ -0.83
SREBF1-204ENST00000395756 RPS29P62273 56 aaKnown RBP9.82□□□□□ -0.84
SREBF1-204ENST00000395756 MYCBP2O75592 4640 aa9.81□□□□□ -0.84
SREBF1-204ENST00000395756 A0A1B0GU69 56 aa9.8□□□□□ -0.84
SREBF1-204ENST00000395756 ACYP2P14621 99 aa9.8□□□□□ -0.84
SREBF1-204ENST00000395756 MIR22HGQ0VDD5 57 aa9.8□□□□□ -0.84
SREBF1-204ENST00000395756 KRTAP17-1Q9BYP8 105 aa9.8□□□□□ -0.84
SREBF1-204ENST00000395756 RYR1P21817 5038 aa9.79□□□□□ -0.84
SREBF1-204ENST00000395756 SPATA8Q6RVD6 105 aa9.77□□□□□ -0.84
SREBF1-204ENST00000395756 EPPK1P58107 5090 aaKnown RBP9.76□□□□□ -0.85
SREBF1-204ENST00000395756 DMAC1Q96GE9 116 aa9.74□□□□□ -0.85
SREBF1-204ENST00000395756 ROMO1P60602 79 aa9.73□□□□□ -0.85
SREBF1-204ENST00000395756 TNXBP22105 4242 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms