RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 TRANK1O15050 2925 aa6.36□□□□□ -1.39
SIN3A-202ENST00000394947 MYO15AQ9UKN7 3530 aa6.34□□□□□ -1.39
SIN3A-202ENST00000394947 APCP25054 2843 aa6.33□□□□□ -1.4
SIN3A-202ENST00000394947 DMXL2Q8TDJ6 3036 aa6.33□□□□□ -1.4
SIN3A-202ENST00000394947 USP34Q70CQ2 3546 aa6.33□□□□□ -1.4
SIN3A-202ENST00000394947 DSPP15924 2871 aaKnown RBP6.33□□□□□ -1.4
SIN3A-202ENST00000394947 SPTBN5Q9NRC6 3674 aaKnown RBP6.32□□□□□ -1.4
SIN3A-202ENST00000394947 ASH1LQ9NR48 2969 aaKnown RBP6.31□□□□□ -1.4
SIN3A-202ENST00000394947 LRBAP50851 2863 aa6.28□□□□□ -1.4
SIN3A-202ENST00000394947 SETXQ7Z333 2677 aaKnown RBP6.28□□□□□ -1.4
SIN3A-202ENST00000394947 MAP1AP78559 2803 aaPredicted RBP6.27□□□□□ -1.41
SIN3A-202ENST00000394947 KMT2BQ9UMN6 2715 aaPredicted RBP6.26□□□□□ -1.41
SIN3A-202ENST00000394947 KRTAP1-4P0C5Y4 121 aa6.25□□□□□ -1.41
SIN3A-202ENST00000394947 KRTAP12-2P59991 146 aa6.24□□□□□ -1.41
SIN3A-202ENST00000394947 NSD1Q96L73 2696 aaPredicted RBP6.23□□□□□ -1.41
SIN3A-202ENST00000394947 BAHCC1Q9P281 2608 aa6.23□□□□□ -1.41
SIN3A-202ENST00000394947 FRYLO94915 3013 aa6.21□□□□□ -1.41
SIN3A-202ENST00000394947 ITPR2Q14571 2701 aa6.21□□□□□ -1.42
SIN3A-202ENST00000394947 COL12A1Q99715 3063 aa6.2□□□□□ -1.42
SIN3A-202ENST00000394947 ZNF292O60281 2723 aa6.2□□□□□ -1.42
SIN3A-202ENST00000394947 ATMQ13315 3056 aa6.2□□□□□ -1.42
SIN3A-202ENST00000394947 UBR5O95071 2799 aaPredicted RBP6.19□□□□□ -1.42
SIN3A-202ENST00000394947 EYSQ5T1H1 3165 aa6.18□□□□□ -1.42
SIN3A-202ENST00000394947 HIVEP1P15822 2718 aa6.18□□□□□ -1.42
SIN3A-202ENST00000394947 NBEAQ8NFP9 2946 aa6.17□□□□□ -1.42
SIN3A-202ENST00000394947 ASPMQ8IZT6 3477 aa6.17□□□□□ -1.42
SIN3A-202ENST00000394947 CRCT1Q9UGL9 99 aa6.16□□□□□ -1.42
SIN3A-202ENST00000394947 DCHS1Q96JQ0 3298 aa6.16□□□□□ -1.42
SIN3A-202ENST00000394947 TPRXLQ17RH7 258 aa6.14□□□□□ -1.43
SIN3A-202ENST00000394947 BOD1L1Q8NFC6 3051 aa6.14□□□□□ -1.43
SIN3A-202ENST00000394947 IGSF10Q6WRI0 2623 aa6.14□□□□□ -1.43
SIN3A-202ENST00000394947 WDFY3Q8IZQ1 3526 aa6.12□□□□□ -1.43
SIN3A-202ENST00000394947 TACC2O95359 2948 aa6.11□□□□□ -1.43
SIN3A-202ENST00000394947 UTP20O75691 2785 aaKnown RBP6.1□□□□□ -1.43
SIN3A-202ENST00000394947 KRTAP13-3Q3SY46 172 aa6.1□□□□□ -1.43
SIN3A-202ENST00000394947 LOC400499M0QZD8 3231 aa6.08□□□□□ -1.44
SIN3A-202ENST00000394947 KRTAP15-1Q3LI76 137 aa6.07□□□□□ -1.44
SIN3A-202ENST00000394947 ITPR1Q14643 2758 aa6.06□□□□□ -1.44
SIN3A-202ENST00000394947 ADGRG4Q8IZF6 3080 aa6.03□□□□□ -1.44
SIN3A-202ENST00000394947 ZZEF1O43149 2961 aa6□□□□□ -1.45
SIN3A-202ENST00000394947 ZFHX4Q86UP3 3567 aa5.99□□□□□ -1.45
SIN3A-202ENST00000394947 KRTAP13-4Q3LI77 160 aa5.96□□□□□ -1.46
SIN3A-202ENST00000394947 KRTAP12-1P59990 96 aa5.93□□□□□ -1.46
SIN3A-202ENST00000394947 CSMD1Q96PZ7 3565 aa5.92□□□□□ -1.46
SIN3A-202ENST00000394947 TNRC18O15417 2968 aaPredicted RBP5.91□□□□□ -1.46
SIN3A-202ENST00000394947 CELSR2Q9HCU4 2923 aa5.88□□□□□ -1.47
SIN3A-202ENST00000394947 NBPF19A0A087WUL8 3843 aa5.86□□□□□ -1.47
SIN3A-202ENST00000394947 LAMA5O15230 3695 aa5.86□□□□□ -1.47
SIN3A-202ENST00000394947 CELSR1Q9NYQ6 3014 aa5.84□□□□□ -1.48
SIN3A-202ENST00000394947 DMXL1Q9Y485 3027 aa5.83□□□□□ -1.48
SIN3A-202ENST00000394947 TGP01266 2768 aa5.82□□□□□ -1.48
SIN3A-202ENST00000394947 SMG1Q96Q15 3661 aaKnown RBP5.79□□□□□ -1.48
SIN3A-202ENST00000394947 DMDP11532 3685 aa5.77□□□□□ -1.49
SIN3A-202ENST00000394947 KRTAP21-3Q3LHN1 58 aa5.77□□□□□ -1.49
SIN3A-202ENST00000394947 DCHS2Q6V1P9 2916 aa5.75□□□□□ -1.49
SIN3A-202ENST00000394947 TENM1Q9UKZ4 2725 aa5.75□□□□□ -1.49
SIN3A-202ENST00000394947 TENM2Q9NT68 2774 aa5.71□□□□□ -1.49
SIN3A-202ENST00000394947 RELNP78509 3460 aa5.71□□□□□ -1.5
SIN3A-202ENST00000394947 KRTAP3-1Q9BYR8 98 aa5.7□□□□□ -1.5
SIN3A-202ENST00000394947 TENM4Q6N022 2769 aa5.69□□□□□ -1.5
SIN3A-202ENST00000394947 HRNRQ86YZ3 2850 aaPredicted RBP5.65□□□□□ -1.5
SIN3A-202ENST00000394947 SVEP1Q4LDE5 3571 aa5.64□□□□□ -1.51
SIN3A-202ENST00000394947 TENM3Q9P273 2699 aa5.62□□□□□ -1.51
SIN3A-202ENST00000394947 NF1P21359 2839 aa5.61□□□□□ -1.51
SIN3A-202ENST00000394947 FBN2P35556 2912 aa5.58□□□□□ -1.52
SIN3A-202ENST00000394947 KRTAP10-12P60413 245 aa5.58□□□□□ -1.52
SIN3A-202ENST00000394947 ZANQ9Y493 2812 aa5.57□□□□□ -1.52
SIN3A-202ENST00000394947 FLNCQ14315 2725 aa5.56□□□□□ -1.52
SIN3A-202ENST00000394947 SPENQ96T58 3664 aaKnown RBP5.56□□□□□ -1.52
SIN3A-202ENST00000394947 VWFP04275 2813 aa5.55□□□□□ -1.52
SIN3A-202ENST00000394947 CUBNO60494 3623 aa5.54□□□□□ -1.52
SIN3A-202ENST00000394947 NIPBLQ6KC79 2804 aaeCLIP5.54□□□□□ -1.52
SIN3A-202ENST00000394947 KRTAP10-6P60371 365 aaPredicted RBP5.53□□□□□ -1.52
SIN3A-202ENST00000394947 PDZD2O15018 2839 aa5.52□□□□□ -1.53
SIN3A-202ENST00000394947 INE1O15225 51 aa5.52□□□□□ -1.53
SIN3A-202ENST00000394947 KRTAP10-5P60370 271 aa5.5□□□□□ -1.53
SIN3A-202ENST00000394947 PKD1L1Q8TDX9 2849 aa5.5□□□□□ -1.53
SIN3A-202ENST00000394947 LCE3AQ5TA76 89 aa5.43□□□□□ -1.54
SIN3A-202ENST00000394947 KRTAP12-3P60328 96 aa5.38□□□□□ -1.55
SIN3A-202ENST00000394947 MXRA5Q9NR99 2828 aa5.38□□□□□ -1.55
SIN3A-202ENST00000394947 MUC3AQ02505 3323 aa5.38□□□□□ -1.55
SIN3A-202ENST00000394947 ZFHX3Q15911 3703 aa5.36□□□□□ -1.55
SIN3A-202ENST00000394947 BSNQ9UPA5 3926 aa5.33□□□□□ -1.56
SIN3A-202ENST00000394947 LORP23490 312 aaPredicted RBP5.32□□□□□ -1.56
SIN3A-202ENST00000394947 KRTAP4-5Q9BYR2 181 aa5.3□□□□□ -1.56
SIN3A-202ENST00000394947 CSMD2Q7Z408 3487 aa5.29□□□□□ -1.56
SIN3A-202ENST00000394947 KRTAP3-3Q9BYR6 98 aa5.28□□□□□ -1.56
SIN3A-202ENST00000394947 KRTAP3-2Q9BYR7 98 aa5.27□□□□□ -1.57
SIN3A-202ENST00000394947 CSMD3Q7Z407 3707 aa5.26□□□□□ -1.57
SIN3A-202ENST00000394947 SRRM2Q9UQ35 2752 aaKnown RBP5.22□□□□□ -1.57
SIN3A-202ENST00000394947 KRTAP8-1Q8IUC2 63 aa5.21□□□□□ -1.58
SIN3A-202ENST00000394947 MEGF8Q7Z7M0 2845 aa5.19□□□□□ -1.58
SIN3A-202ENST00000394947 VPS13CQ709C8 3753 aa5.19□□□□□ -1.58
SIN3A-202ENST00000394947 MT1HL1P0DM35 61 aa5.18□□□□□ -1.58
SIN3A-202ENST00000394947 ANK3Q12955 4377 aaKnown RBP5.15□□□□□ -1.58
SIN3A-202ENST00000394947 TRRAPQ9Y4A5 3859 aa5.12□□□□□ -1.59
SIN3A-202ENST00000394947 FBN3Q75N90 2809 aa5.11□□□□□ -1.59
SIN3A-202ENST00000394947 COL7A1Q02388 2944 aa5.1□□□□□ -1.59
SIN3A-202ENST00000394947 HUWE1Q7Z6Z7 4374 aaKnown RBP5.09□□□□□ -1.59
SIN3A-202ENST00000394947 AKAP9Q99996 3911 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms