RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 C8orf87E5RJ46 101 aa5.39□□□□□ -1.55
RTN4-206ENST00000394611 KRTAP4-16G5E9R7 235 aaPredicted RBP5.39□□□□□ -1.55
RTN4-206ENST00000394611 STARD9Q9P2P6 4700 aa5.39□□□□□ -1.55
RTN4-206ENST00000394611 SPRR1AP35321 89 aa5.39□□□□□ -1.55
RTN4-206ENST00000394611 TP53AIP1Q9HCN2 124 aa5.39□□□□□ -1.55
RTN4-206ENST00000394611 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.39□□□□□ -1.55
RTN4-206ENST00000394611 H3BPC8 53 aa5.38□□□□□ -1.55
RTN4-206ENST00000394611 TLX1NBP0CAT3 122 aa5.38□□□□□ -1.55
RTN4-206ENST00000394611 Q75L30 129 aa5.38□□□□□ -1.55
RTN4-206ENST00000394611 IGLV7-46A0A075B6I9 117 aa5.38□□□□□ -1.55
RTN4-206ENST00000394611 IGLV5-52A0A0A0MRZ9 124 aa5.37□□□□□ -1.55
RTN4-206ENST00000394611 SPANXA2-OT1Q8N9U9 137 aa5.37□□□□□ -1.55
RTN4-206ENST00000394611 LINC00472Q9H8W2 130 aa5.37□□□□□ -1.55
RTN4-206ENST00000394611 MIR22HGQ0VDD5 57 aa5.37□□□□□ -1.55
RTN4-206ENST00000394611 LYSTQ99698 3801 aa5.37□□□□□ -1.55
RTN4-206ENST00000394611 PLECQ15149 4684 aaKnown RBP5.37□□□□□ -1.55
RTN4-206ENST00000394611 PSORS1C2Q9UIG4 136 aa5.36□□□□□ -1.55
RTN4-206ENST00000394611 ZNF706Q9Y5V0 76 aaPredicted RBP5.35□□□□□ -1.55
RTN4-206ENST00000394611 KRTAP29-1A8MX34 341 aaPredicted RBP5.35□□□□□ -1.55
RTN4-206ENST00000394611 WWC2-AS2Q96NR7 200 aa5.35□□□□□ -1.55
RTN4-206ENST00000394611 CSAG1Q6PB30 78 aa5.34□□□□□ -1.55
RTN4-206ENST00000394611 DYNC2H1Q8NCM8 4307 aaKnown RBP5.34□□□□□ -1.55
RTN4-206ENST00000394611 PLA2G2DQ9UNK4 145 aa5.34□□□□□ -1.56
RTN4-206ENST00000394611 UQCR11O14957 56 aa5.32□□□□□ -1.56
RTN4-206ENST00000394611 Q5W150 140 aa5.32□□□□□ -1.56
RTN4-206ENST00000394611 NBDYA0A0U1RRE5 68 aa5.32□□□□□ -1.56
RTN4-206ENST00000394611 SSBP3-AS1Q7Z2R9 100 aa5.32□□□□□ -1.56
RTN4-206ENST00000394611 NUPR2A6NF83 97 aa5.31□□□□□ -1.56
RTN4-206ENST00000394611 Q96NJ1 140 aa5.31□□□□□ -1.56
RTN4-206ENST00000394611 LINC01558Q9Y6Z2 57 aa5.31□□□□□ -1.56
RTN4-206ENST00000394611 IGLV5-37A0A075B6J1 123 aa5.3□□□□□ -1.56
RTN4-206ENST00000394611 APLNQ9ULZ1 77 aa5.3□□□□□ -1.56
RTN4-206ENST00000394611 A6NN06 94 aa5.3□□□□□ -1.56
RTN4-206ENST00000394611 LINC01554Q52M75 96 aa5.3□□□□□ -1.56
RTN4-206ENST00000394611 C9orf92A6NGG3 77 aa5.29□□□□□ -1.56
RTN4-206ENST00000394611 LCE6AA0A183 80 aa5.28□□□□□ -1.56
RTN4-206ENST00000394611 DNAH1Q9P2D7 4330 aa5.26□□□□□ -1.57
RTN4-206ENST00000394611 A0A0D9SG42 100 aa5.25□□□□□ -1.57
RTN4-206ENST00000394611 ZNF861PO60384 105 aa5.25□□□□□ -1.57
RTN4-206ENST00000394611 KMT2AQ03164 3969 aa5.24□□□□□ -1.57
RTN4-206ENST00000394611 VPS13DQ5THJ4 4388 aa5.24□□□□□ -1.57
RTN4-206ENST00000394611 K7ERS5 55 aa5.23□□□□□ -1.57
RTN4-206ENST00000394611 HYDINQ4G0P3 5121 aa5.23□□□□□ -1.57
RTN4-206ENST00000394611 FAM229AH3BQW9 127 aa5.23□□□□□ -1.57
RTN4-206ENST00000394611 A0A087WTM6 91 aa5.22□□□□□ -1.57
RTN4-206ENST00000394611 C1orf134Q5TEV5 83 aa5.22□□□□□ -1.57
RTN4-206ENST00000394611 SMR3BP02814 79 aaPredicted RBP5.21□□□□□ -1.57
RTN4-206ENST00000394611 SPINT4Q6UDR6 99 aa5.21□□□□□ -1.57
RTN4-206ENST00000394611 KMT2CQ8NEZ4 4911 aaKnown RBP5.21□□□□□ -1.58
RTN4-206ENST00000394611 ALMS1Q8TCU4 4167 aa5.2□□□□□ -1.58
RTN4-206ENST00000394611 SACSQ9NZJ4 4579 aa5.2□□□□□ -1.58
RTN4-206ENST00000394611 PLA2G1BP04054 148 aaKnown RBP5.19□□□□□ -1.58
RTN4-206ENST00000394611 DNAH10Q8IVF4 4471 aa5.19□□□□□ -1.58
RTN4-206ENST00000394611 TYMSOSQ8TAI1 123 aa5.17□□□□□ -1.58
RTN4-206ENST00000394611 IGLV7-43P04211 117 aa5.17□□□□□ -1.58
RTN4-206ENST00000394611 DNAH2Q9P225 4427 aa5.17□□□□□ -1.58
RTN4-206ENST00000394611 SPATA8Q6RVD6 105 aa5.15□□□□□ -1.58
RTN4-206ENST00000394611 RYR2Q92736 4967 aa5.15□□□□□ -1.58
RTN4-206ENST00000394611 SPRR1BP22528 89 aa5.14□□□□□ -1.59
RTN4-206ENST00000394611 Q6ZR54 194 aa5.14□□□□□ -1.59
RTN4-206ENST00000394611 DNAH6Q9C0G6 4158 aa5.14□□□□□ -1.59
RTN4-206ENST00000394611 RYR3Q15413 4870 aa5.14□□□□□ -1.59
RTN4-206ENST00000394611 FRAS1Q86XX4 4008 aa5.11□□□□□ -1.59
RTN4-206ENST00000394611 Q6ZRN7 208 aaPredicted RBP5.08□□□□□ -1.6
RTN4-206ENST00000394611 DMAC1Q96GE9 116 aa5.08□□□□□ -1.6
RTN4-206ENST00000394611 DNAH17Q9UFH2 4485 aa5.08□□□□□ -1.6
RTN4-206ENST00000394611 A0A1B0GU33 70 aa5.07□□□□□ -1.6
RTN4-206ENST00000394611 FAT2Q9NYQ8 4349 aa5.06□□□□□ -1.6
RTN4-206ENST00000394611 KRTAP10-2P60368 255 aa5.05□□□□□ -1.6
RTN4-206ENST00000394611 DNAH11Q96DT5 4516 aa5.03□□□□□ -1.6
RTN4-206ENST00000394611 HECTD4Q9Y4D8 3996 aa5.03□□□□□ -1.6
RTN4-206ENST00000394611 PKD1P98161 4303 aa5.02□□□□□ -1.61
RTN4-206ENST00000394611 KRTAP13-1Q8IUC0 172 aa5.01□□□□□ -1.61
RTN4-206ENST00000394611 LINC00304Q8N9R0 145 aa5.01□□□□□ -1.61
RTN4-206ENST00000394611 DNAH5Q8TE73 4624 aa5□□□□□ -1.61
RTN4-206ENST00000394611 PLAC8Q9NZF1 115 aa4.98□□□□□ -1.61
RTN4-206ENST00000394611 PKHD1P08F94 4074 aa4.98□□□□□ -1.61
RTN4-206ENST00000394611 LINC00483Q53H64 154 aa4.98□□□□□ -1.61
RTN4-206ENST00000394611 KRTAP13-2Q52LG2 175 aa4.96□□□□□ -1.62
RTN4-206ENST00000394611 EPPK1P58107 5090 aaKnown RBP4.96□□□□□ -1.62
RTN4-206ENST00000394611 A0A1B0GVY2 172 aa4.95□□□□□ -1.62
RTN4-206ENST00000394611 KRTAP10-1P60331 282 aa4.95□□□□□ -1.62
RTN4-206ENST00000394611 C10orf95Q9H7T3 257 aa4.94□□□□□ -1.62
RTN4-206ENST00000394611 DYNC1H1Q14204 4646 aaKnown RBP4.94□□□□□ -1.62
RTN4-206ENST00000394611 LRP1BQ9NZR2 4599 aa4.93□□□□□ -1.62
RTN4-206ENST00000394611 KRTAP25-1Q3LHN0 102 aa4.91□□□□□ -1.62
RTN4-206ENST00000394611 Q6ZSA8 131 aa4.91□□□□□ -1.62
RTN4-206ENST00000394611 A8MUU9 505 aa4.91□□□□□ -1.62
RTN4-206ENST00000394611 ASB16-AS1Q495Z4 193 aa4.9□□□□□ -1.62
RTN4-206ENST00000394611 NDUFAF8A1L188 74 aa4.9□□□□□ -1.63
RTN4-206ENST00000394611 H0YAA0 97 aa4.9□□□□□ -1.63
RTN4-206ENST00000394611 ROMO1P60602 79 aa4.9□□□□□ -1.63
RTN4-206ENST00000394611 DNAH8Q96JB1 4490 aa4.89□□□□□ -1.63
RTN4-206ENST00000394611 H1FX-AS1Q4G0G2 97 aa4.89□□□□□ -1.63
RTN4-206ENST00000394611 APOBP04114 4563 aaKnown RBP4.86□□□□□ -1.63
RTN4-206ENST00000394611 KIAA1109Q2LD37 5005 aa4.83□□□□□ -1.64
RTN4-206ENST00000394611 COX6B2Q6YFQ2 88 aa4.83□□□□□ -1.64
RTN4-206ENST00000394611 KRTAP13-3Q3SY46 172 aa4.82□□□□□ -1.64
RTN4-206ENST00000394611 RYR1P21817 5038 aa4.81□□□□□ -1.64
RTN4-206ENST00000394611 RPL37P61927 97 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms