RNA–Protein interactions for RNA: ENST00000393243.5

GSE1-202, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-202ENST00000393243 BOD1L1Q8NFC6 3051 aa7.35□□□□□ -1.23
GSE1-202ENST00000393243 ITPR2Q14571 2701 aa7.35□□□□□ -1.23
GSE1-202ENST00000393243 NSD1Q96L73 2696 aaPredicted RBP7.33□□□□□ -1.24
GSE1-202ENST00000393243 KRTAP10-8P60410 259 aa7.32□□□□□ -1.24
GSE1-202ENST00000393243 TACC2O95359 2948 aa7.32□□□□□ -1.24
GSE1-202ENST00000393243 UBR5O95071 2799 aaPredicted RBP7.32□□□□□ -1.24
GSE1-202ENST00000393243 BAHCC1Q9P281 2608 aa7.32□□□□□ -1.24
GSE1-202ENST00000393243 RPS29P62273 56 aaKnown RBP7.32□□□□□ -1.24
GSE1-202ENST00000393243 FRYLO94915 3013 aa7.31□□□□□ -1.24
GSE1-202ENST00000393243 P0C880 135 aa7.3□□□□□ -1.24
GSE1-202ENST00000393243 KRTAP13-1Q8IUC0 172 aa7.3□□□□□ -1.24
GSE1-202ENST00000393243 COL12A1Q99715 3063 aa7.29□□□□□ -1.24
GSE1-202ENST00000393243 HIVEP1P15822 2718 aa7.26□□□□□ -1.25
GSE1-202ENST00000393243 NBEAQ8NFP9 2946 aa7.26□□□□□ -1.25
GSE1-202ENST00000393243 UTP20O75691 2785 aaKnown RBP7.24□□□□□ -1.25
GSE1-202ENST00000393243 ADGRG4Q8IZF6 3080 aa7.23□□□□□ -1.25
GSE1-202ENST00000393243 KMT2BQ9UMN6 2715 aaPredicted RBP7.23□□□□□ -1.25
GSE1-202ENST00000393243 ITPR1Q14643 2758 aa7.23□□□□□ -1.25
GSE1-202ENST00000393243 ATMQ13315 3056 aa7.22□□□□□ -1.25
GSE1-202ENST00000393243 USP34Q70CQ2 3546 aa7.19□□□□□ -1.26
GSE1-202ENST00000393243 IGSF10Q6WRI0 2623 aa7.15□□□□□ -1.26
GSE1-202ENST00000393243 SPTBN5Q9NRC6 3674 aaKnown RBP7.14□□□□□ -1.27
GSE1-202ENST00000393243 H0YAA0 97 aa7.13□□□□□ -1.27
GSE1-202ENST00000393243 ZZEF1O43149 2961 aa7.12□□□□□ -1.27
GSE1-202ENST00000393243 MYO15AQ9UKN7 3530 aa7.12□□□□□ -1.27
GSE1-202ENST00000393243 XP32Q5T750 250 aa7.1□□□□□ -1.27
GSE1-202ENST00000393243 EYSQ5T1H1 3165 aa7.09□□□□□ -1.27
GSE1-202ENST00000393243 CELSR2Q9HCU4 2923 aa7.07□□□□□ -1.28
GSE1-202ENST00000393243 WDFY3Q8IZQ1 3526 aa7.06□□□□□ -1.28
GSE1-202ENST00000393243 KRTAP10-10P60014 251 aa7.06□□□□□ -1.28
GSE1-202ENST00000393243 ASPMQ8IZT6 3477 aa7.04□□□□□ -1.28
GSE1-202ENST00000393243 DCHS1Q96JQ0 3298 aa7.01□□□□□ -1.29
GSE1-202ENST00000393243 LOC400499M0QZD8 3231 aa7□□□□□ -1.29
GSE1-202ENST00000393243 KRTAP1-4P0C5Y4 121 aa7□□□□□ -1.29
GSE1-202ENST00000393243 PP632Q6XCG6 107 aa7□□□□□ -1.29
GSE1-202ENST00000393243 DMXL1Q9Y485 3027 aa6.97□□□□□ -1.29
GSE1-202ENST00000393243 TNRC18O15417 2968 aaPredicted RBP6.93□□□□□ -1.3
GSE1-202ENST00000393243 DCHS2Q6V1P9 2916 aa6.92□□□□□ -1.3
GSE1-202ENST00000393243 PRO2289Q9P1D8 64 aa6.82□□□□□ -1.32
GSE1-202ENST00000393243 TENM4Q6N022 2769 aa6.82□□□□□ -1.32
GSE1-202ENST00000393243 CSMD1Q96PZ7 3565 aa6.82□□□□□ -1.32
GSE1-202ENST00000393243 CELSR1Q9NYQ6 3014 aa6.81□□□□□ -1.32
GSE1-202ENST00000393243 FLNCQ14315 2725 aa6.81□□□□□ -1.32
GSE1-202ENST00000393243 TPRXLQ17RH7 258 aa6.8□□□□□ -1.32
GSE1-202ENST00000393243 ZFHX4Q86UP3 3567 aa6.79□□□□□ -1.32
GSE1-202ENST00000393243 TENM1Q9UKZ4 2725 aa6.78□□□□□ -1.32
GSE1-202ENST00000393243 KRTAP12-2P59991 146 aa6.77□□□□□ -1.33
GSE1-202ENST00000393243 FBN2P35556 2912 aa6.76□□□□□ -1.33
GSE1-202ENST00000393243 KRTAP13-3Q3SY46 172 aa6.76□□□□□ -1.33
GSE1-202ENST00000393243 LAMA5O15230 3695 aa6.75□□□□□ -1.33
GSE1-202ENST00000393243 RELNP78509 3460 aa6.73□□□□□ -1.33
GSE1-202ENST00000393243 TGP01266 2768 aa6.73□□□□□ -1.33
GSE1-202ENST00000393243 NBPF19A0A087WUL8 3843 aa6.71□□□□□ -1.33
GSE1-202ENST00000393243 NF1P21359 2839 aa6.71□□□□□ -1.34
GSE1-202ENST00000393243 ZANQ9Y493 2812 aa6.7□□□□□ -1.34
GSE1-202ENST00000393243 TENM2Q9NT68 2774 aa6.64□□□□□ -1.35
GSE1-202ENST00000393243 NIPBLQ6KC79 2804 aaeCLIP6.64□□□□□ -1.353e-6■■■□□ 17
GSE1-202ENST00000393243 HRNRQ86YZ3 2850 aaPredicted RBP6.62□□□□□ -1.35
GSE1-202ENST00000393243 KRTAP21-3Q3LHN1 58 aa6.6□□□□□ -1.35
GSE1-202ENST00000393243 TENM3Q9P273 2699 aa6.56□□□□□ -1.36
GSE1-202ENST00000393243 PKD1L1Q8TDX9 2849 aa6.55□□□□□ -1.36
GSE1-202ENST00000393243 VWFP04275 2813 aa6.54□□□□□ -1.36
GSE1-202ENST00000393243 CRCT1Q9UGL9 99 aa6.53□□□□□ -1.36
GSE1-202ENST00000393243 KRTAP12-1P59990 96 aa6.52□□□□□ -1.37
GSE1-202ENST00000393243 KRTAP13-4Q3LI77 160 aa6.5□□□□□ -1.37
GSE1-202ENST00000393243 PDZD2O15018 2839 aa6.5□□□□□ -1.37
GSE1-202ENST00000393243 CUBNO60494 3623 aa6.49□□□□□ -1.37
GSE1-202ENST00000393243 SMG1Q96Q15 3661 aaKnown RBP6.48□□□□□ -1.37
GSE1-202ENST00000393243 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
GSE1-202ENST00000393243 MXRA5Q9NR99 2828 aa6.45□□□□□ -1.38
GSE1-202ENST00000393243 SVEP1Q4LDE5 3571 aa6.42□□□□□ -1.38
GSE1-202ENST00000393243 SPENQ96T58 3664 aaKnown RBP6.4□□□□□ -1.39
GSE1-202ENST00000393243 KRTAP3-1Q9BYR8 98 aa6.38□□□□□ -1.39
GSE1-202ENST00000393243 DMDP11532 3685 aa6.33□□□□□ -1.4
GSE1-202ENST00000393243 ZFHX3Q15911 3703 aa6.33□□□□□ -1.4
GSE1-202ENST00000393243 CSMD2Q7Z408 3487 aa6.21□□□□□ -1.42
GSE1-202ENST00000393243 KRTAP10-6P60371 365 aaPredicted RBP6.19□□□□□ -1.42
GSE1-202ENST00000393243 SRRM2Q9UQ35 2752 aaKnown RBP6.12□□□□□ -1.43
GSE1-202ENST00000393243 MEGF8Q7Z7M0 2845 aa6.11□□□□□ -1.43
GSE1-202ENST00000393243 MUC3AQ02505 3323 aa6.1□□□□□ -1.43
GSE1-202ENST00000393243 FBN3Q75N90 2809 aa6.09□□□□□ -1.43
GSE1-202ENST00000393243 FBN1P35555 2871 aaKnown RBP6.09□□□□□ -1.43
GSE1-202ENST00000393243 COL7A1Q02388 2944 aa6.07□□□□□ -1.44
GSE1-202ENST00000393243 TRRAPQ9Y4A5 3859 aa6.04□□□□□ -1.44
GSE1-202ENST00000393243 KRTAP10-12P60413 245 aa6.03□□□□□ -1.44
GSE1-202ENST00000393243 CSMD3Q7Z407 3707 aa6□□□□□ -1.45
GSE1-202ENST00000393243 ANK3Q12955 4377 aaKnown RBP5.99□□□□□ -1.45
GSE1-202ENST00000393243 VPS13CQ709C8 3753 aa5.96□□□□□ -1.45
GSE1-202ENST00000393243 INE1O15225 51 aa5.93□□□□□ -1.46
GSE1-202ENST00000393243 KRTAP3-3Q9BYR6 98 aa5.93□□□□□ -1.46
GSE1-202ENST00000393243 KRTAP3-2Q9BYR7 98 aa5.92□□□□□ -1.46
GSE1-202ENST00000393243 KRTAP4-5Q9BYR2 181 aa5.89□□□□□ -1.47
GSE1-202ENST00000393243 LCE3AQ5TA76 89 aa5.87□□□□□ -1.47
GSE1-202ENST00000393243 MT1HL1P0DM35 61 aa5.87□□□□□ -1.47
GSE1-202ENST00000393243 OTOGQ6ZRI0 2925 aa5.86□□□□□ -1.47
GSE1-202ENST00000393243 KRTAP12-3P60328 96 aa5.85□□□□□ -1.47
GSE1-202ENST00000393243 HUWE1Q7Z6Z7 4374 aaKnown RBP5.81□□□□□ -1.48
GSE1-202ENST00000393243 BSNQ9UPA5 3926 aa5.81□□□□□ -1.48
GSE1-202ENST00000393243 KRTAP10-5P60370 271 aa5.79□□□□□ -1.48
GSE1-202ENST00000393243 LORP23490 312 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms