RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 TLX1NBP0CAT3 122 aa4.67□□□□□ -1.66
VTI1A-201ENST00000393077 ZNF861PO60384 105 aa4.67□□□□□ -1.66
VTI1A-201ENST00000393077 IGLV7-43P04211 117 aa4.67□□□□□ -1.66
VTI1A-201ENST00000393077 PDZD2O15018 2839 aa4.66□□□□□ -1.66
VTI1A-201ENST00000393077 VWFP04275 2813 aa4.66□□□□□ -1.66
VTI1A-201ENST00000393077 CIRBP-AS1Q8TBR5 109 aa4.65□□□□□ -1.66
VTI1A-201ENST00000393077 LUZP6Q538Z0 58 aa4.65□□□□□ -1.67
VTI1A-201ENST00000393077 FBN1P35555 2871 aaKnown RBP4.64□□□□□ -1.67
VTI1A-201ENST00000393077 KRTAP4-16G5E9R7 235 aaPredicted RBP4.63□□□□□ -1.67
VTI1A-201ENST00000393077 A8MUU9 505 aa4.63□□□□□ -1.67
VTI1A-201ENST00000393077 A0A1B0GU33 70 aa4.61□□□□□ -1.67
VTI1A-201ENST00000393077 LINC00483Q53H64 154 aa4.61□□□□□ -1.67
VTI1A-201ENST00000393077 KRTAP26-1Q6PEX3 210 aa4.6□□□□□ -1.67
VTI1A-201ENST00000393077 CASC10Q5T4H9 136 aa4.6□□□□□ -1.67
VTI1A-201ENST00000393077 IGLV5-52A0A0A0MRZ9 124 aa4.59□□□□□ -1.67
VTI1A-201ENST00000393077 CHTF8P0CG12 524 aa4.59□□□□□ -1.68
VTI1A-201ENST00000393077 C20orf166-AS1Q96NR2 134 aa4.59□□□□□ -1.68
VTI1A-201ENST00000393077 AKAP9Q99996 3911 aa4.58□□□□□ -1.68
VTI1A-201ENST00000393077 NBDYA0A0U1RRE5 68 aa4.58□□□□□ -1.68
VTI1A-201ENST00000393077 TENM3Q9P273 2699 aa4.57□□□□□ -1.68
VTI1A-201ENST00000393077 Q5W150 140 aa4.56□□□□□ -1.68
VTI1A-201ENST00000393077 Q8N1X5 172 aa4.55□□□□□ -1.68
VTI1A-201ENST00000393077 SPRR1BP22528 89 aa4.54□□□□□ -1.68
VTI1A-201ENST00000393077 LINC00304Q8N9R0 145 aa4.54□□□□□ -1.68
VTI1A-201ENST00000393077 APLNQ9ULZ1 77 aa4.52□□□□□ -1.69
VTI1A-201ENST00000393077 NOTCH2NLQ7Z3S9 236 aa4.51□□□□□ -1.69
VTI1A-201ENST00000393077 PSORS1C2Q9UIG4 136 aa4.51□□□□□ -1.69
VTI1A-201ENST00000393077 ANAPC11Q9NYG5 84 aa4.5□□□□□ -1.69
VTI1A-201ENST00000393077 KRTAP11-1Q8IUC1 163 aa4.49□□□□□ -1.69
VTI1A-201ENST00000393077 A0A0D9SG42 100 aa4.49□□□□□ -1.69
VTI1A-201ENST00000393077 PKD1L1Q8TDX9 2849 aa4.49□□□□□ -1.69
VTI1A-201ENST00000393077 WWC2-AS2Q96NR7 200 aa4.48□□□□□ -1.69
VTI1A-201ENST00000393077 PANO1I0J062 215 aa4.48□□□□□ -1.69
VTI1A-201ENST00000393077 P0C880 135 aa4.48□□□□□ -1.69
VTI1A-201ENST00000393077 KRTAP1-5Q9BYS1 174 aa4.46□□□□□ -1.69
VTI1A-201ENST00000393077 H1FX-AS1Q4G0G2 97 aa4.46□□□□□ -1.7
VTI1A-201ENST00000393077 SPACA4Q8TDM5 124 aa4.46□□□□□ -1.7
VTI1A-201ENST00000393077 A0A087WTM6 91 aa4.45□□□□□ -1.7
VTI1A-201ENST00000393077 KRTAP7-1Q8IUC3 87 aa4.45□□□□□ -1.7
VTI1A-201ENST00000393077 Q96NJ1 140 aa4.45□□□□□ -1.7
VTI1A-201ENST00000393077 KRTAP3-3Q9BYR6 98 aa4.44□□□□□ -1.7
VTI1A-201ENST00000393077 KRTAP3-2Q9BYR7 98 aa4.44□□□□□ -1.7
VTI1A-201ENST00000393077 TRRAPQ9Y4A5 3859 aa4.43□□□□□ -1.7
VTI1A-201ENST00000393077 SEC61BP60468 96 aaKnown RBP4.42□□□□□ -1.7
VTI1A-201ENST00000393077 RPL37P61927 97 aaKnown RBP4.42□□□□□ -1.7
VTI1A-201ENST00000393077 TENM2Q9NT68 2774 aa4.42□□□□□ -1.7
VTI1A-201ENST00000393077 ZNF469Q96JG9 3925 aaPredicted RBP4.41□□□□□ -1.7
VTI1A-201ENST00000393077 Q6ZSA8 131 aa4.4□□□□□ -1.7
VTI1A-201ENST00000393077 H0YAA0 97 aa4.39□□□□□ -1.71
VTI1A-201ENST00000393077 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.39□□□□□ -1.71
VTI1A-201ENST00000393077 TGP01266 2768 aa4.38□□□□□ -1.71
VTI1A-201ENST00000393077 ANK3Q12955 4377 aaKnown RBP4.35□□□□□ -1.71
VTI1A-201ENST00000393077 SMR3BP02814 79 aaPredicted RBP4.35□□□□□ -1.71
VTI1A-201ENST00000393077 TYMSOSQ8TAI1 123 aa4.33□□□□□ -1.72
VTI1A-201ENST00000393077 C10orf95Q9H7T3 257 aa4.33□□□□□ -1.72
VTI1A-201ENST00000393077 SRRM2Q9UQ35 2752 aaKnown RBP4.3□□□□□ -1.72
VTI1A-201ENST00000393077 LCE2DQ5TA82 110 aaPredicted RBP4.29□□□□□ -1.72
VTI1A-201ENST00000393077 COX6B2Q6YFQ2 88 aa4.28□□□□□ -1.72
VTI1A-201ENST00000393077 KRTAP13-3Q3SY46 172 aa4.27□□□□□ -1.73
VTI1A-201ENST00000393077 KRTAP10-2P60368 255 aa4.27□□□□□ -1.73
VTI1A-201ENST00000393077 Q6ZRN7 208 aaPredicted RBP4.25□□□□□ -1.73
VTI1A-201ENST00000393077 KRTAP13-1Q8IUC0 172 aa4.23□□□□□ -1.73
VTI1A-201ENST00000393077 KRTAP10-1P60331 282 aa4.22□□□□□ -1.73
VTI1A-201ENST00000393077 TPRXLQ17RH7 258 aa4.22□□□□□ -1.73
VTI1A-201ENST00000393077 C9orf92A6NGG3 77 aa4.22□□□□□ -1.73
VTI1A-201ENST00000393077 CAMK2N1Q7Z7J9 78 aa4.21□□□□□ -1.74
VTI1A-201ENST00000393077 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.74
VTI1A-201ENST00000393077 CSMD3Q7Z407 3707 aa4.18□□□□□ -1.74
VTI1A-201ENST00000393077 FBN3Q75N90 2809 aa4.17□□□□□ -1.74
VTI1A-201ENST00000393077 PLAC4Q8WY50 150 aa4.15□□□□□ -1.75
VTI1A-201ENST00000393077 S4R3F8 94 aa4.14□□□□□ -1.75
VTI1A-201ENST00000393077 ANK2Q01484 3957 aa4.12□□□□□ -1.75
VTI1A-201ENST00000393077 KRTAP21-3Q3LHN1 58 aa4.11□□□□□ -1.75
VTI1A-201ENST00000393077 COL7A1Q02388 2944 aa4.09□□□□□ -1.75
VTI1A-201ENST00000393077 MEGF8Q7Z7M0 2845 aa4.08□□□□□ -1.76
VTI1A-201ENST00000393077 Q5VSD8 79 aa4.03□□□□□ -1.76
VTI1A-201ENST00000393077 KRTAP13-2Q52LG2 175 aa4.02□□□□□ -1.77
VTI1A-201ENST00000393077 CMYA5Q8N3K9 4069 aa4□□□□□ -1.77
VTI1A-201ENST00000393077 KRTAP10-8P60410 259 aa3.97□□□□□ -1.77
VTI1A-201ENST00000393077 R4GN34 69 aa3.96□□□□□ -1.78
VTI1A-201ENST00000393077 HUWE1Q7Z6Z7 4374 aaKnown RBP3.96□□□□□ -1.78
VTI1A-201ENST00000393077 M0QZ58 72 aa3.95□□□□□ -1.78
VTI1A-201ENST00000393077 LYSTQ99698 3801 aa3.95□□□□□ -1.78
VTI1A-201ENST00000393077 KRTAP12-2P59991 146 aa3.94□□□□□ -1.78
VTI1A-201ENST00000393077 KRTAP1-4P0C5Y4 121 aa3.93□□□□□ -1.78
VTI1A-201ENST00000393077 KRTAP13-4Q3LI77 160 aa3.92□□□□□ -1.78
VTI1A-201ENST00000393077 KRTAP3-1Q9BYR8 98 aa3.92□□□□□ -1.78
VTI1A-201ENST00000393077 DNHD1Q96M86 4753 aa3.9□□□□□ -1.79
VTI1A-201ENST00000393077 XP32Q5T750 250 aa3.89□□□□□ -1.79
VTI1A-201ENST00000393077 ALMS1Q8TCU4 4167 aa3.88□□□□□ -1.79
VTI1A-201ENST00000393077 LCE2CQ5TA81 110 aa3.88□□□□□ -1.79
VTI1A-201ENST00000393077 PP632Q6XCG6 107 aa3.88□□□□□ -1.79
VTI1A-201ENST00000393077 KRTAP12-1P59990 96 aa3.87□□□□□ -1.79
VTI1A-201ENST00000393077 KRTAP10-6P60371 365 aaPredicted RBP3.87□□□□□ -1.79
VTI1A-201ENST00000393077 DNAH9Q9NYC9 4486 aa3.87□□□□□ -1.79
VTI1A-201ENST00000393077 LCE2BO14633 110 aa3.86□□□□□ -1.79
VTI1A-201ENST00000393077 RPS29P62273 56 aaKnown RBP3.83□□□□□ -1.8
VTI1A-201ENST00000393077 A0A1B0GVY2 172 aa3.83□□□□□ -1.8
VTI1A-201ENST00000393077 PLECQ15149 4684 aaKnown RBP3.82□□□□□ -1.8
VTI1A-201ENST00000393077 PRO2289Q9P1D8 64 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms