RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 Q96NJ1 140 aa2.02□□□□□ -2.09
XRN1-202ENST00000392981 ADAMTS9Q9P2N4 1935 aa2.02□□□□□ -2.09
XRN1-202ENST00000392981 ANKRD11Q6UB99 2663 aaPredicted RBP2.02□□□□□ -2.09
XRN1-202ENST00000392981 FLG2Q5D862 2391 aaPredicted RBP2.02□□□□□ -2.09
XRN1-202ENST00000392981 ITPR2Q14571 2701 aa2.02□□□□□ -2.09
XRN1-202ENST00000392981 NAV2Q8IVL1 2488 aa2.02□□□□□ -2.09
XRN1-202ENST00000392981 DNAH11Q96DT5 4516 aa2.01□□□□□ -2.09
XRN1-202ENST00000392981 ZFHX2Q9C0A1 2572 aaPredicted RBP2.01□□□□□ -2.09
XRN1-202ENST00000392981 LCE6AA0A183 80 aa2.01□□□□□ -2.09
XRN1-202ENST00000392981 P0C880 135 aa2.01□□□□□ -2.09
XRN1-202ENST00000392981 CACNA1AO00555 2505 aa2.01□□□□□ -2.09
XRN1-202ENST00000392981 SACSQ9NZJ4 4579 aa2.01□□□□□ -2.09
XRN1-202ENST00000392981 J3QKU1 62 aa2□□□□□ -2.09
XRN1-202ENST00000392981 MEGF8Q7Z7M0 2845 aa2□□□□□ -2.09
XRN1-202ENST00000392981 FN1P02751 2386 aaKnown RBP2□□□□□ -2.09
XRN1-202ENST00000392981 LOC100996750A0A140TA64 210 aa2□□□□□ -2.09
XRN1-202ENST00000392981 KRTAP4-6Q9BYQ5 205 aa2□□□□□ -2.09
XRN1-202ENST00000392981 LINC01558Q9Y6Z2 57 aa2□□□□□ -2.09
XRN1-202ENST00000392981 MYO9AB2RTY4 2548 aa2□□□□□ -2.09
XRN1-202ENST00000392981 UNC79Q9P2D8 2635 aa2□□□□□ -2.09
XRN1-202ENST00000392981 C10orf99Q6UWK7 81 aa2□□□□□ -2.09
XRN1-202ENST00000392981 CCDC168Q8NDH2 2452 aa2□□□□□ -2.09
XRN1-202ENST00000392981 K7EQZ3 153 aa1.99□□□□□ -2.09
XRN1-202ENST00000392981 ACACBO00763 2458 aa1.99□□□□□ -2.09
XRN1-202ENST00000392981 ZCCHC13Q8WW36 166 aaKnown RBP1.99□□□□□ -2.09
XRN1-202ENST00000392981 USP24Q9UPU5 2620 aa1.99□□□□□ -2.09
XRN1-202ENST00000392981 PKD1L2Q7Z442 2459 aa1.99□□□□□ -2.09
XRN1-202ENST00000392981 PLECQ15149 4684 aaKnown RBP1.99□□□□□ -2.09
XRN1-202ENST00000392981 Q6ZRX8 168 aa1.99□□□□□ -2.09
XRN1-202ENST00000392981 RIF1Q5UIP0 2472 aaKnown RBP1.98□□□□□ -2.09
XRN1-202ENST00000392981 SETXQ7Z333 2677 aaKnown RBP1.98□□□□□ -2.09
XRN1-202ENST00000392981 H1FX-AS1Q4G0G2 97 aa1.98□□□□□ -2.09
XRN1-202ENST00000392981 HIVEP2P31629 2446 aa1.98□□□□□ -2.09
XRN1-202ENST00000392981 ALMS1Q8TCU4 4167 aa1.98□□□□□ -2.09
XRN1-202ENST00000392981 TPRXLQ17RH7 258 aa1.98□□□□□ -2.09
XRN1-202ENST00000392981 PLAC8Q9NZF1 115 aa1.98□□□□□ -2.09
XRN1-202ENST00000392981 DNAH8Q96JB1 4490 aa1.98□□□□□ -2.09
XRN1-202ENST00000392981 KRTAP9-4Q9BYQ2 154 aa1.97□□□□□ -2.09
XRN1-202ENST00000392981 NOTCH2Q04721 2471 aa1.97□□□□□ -2.09
XRN1-202ENST00000392981 LCE4AQ5TA78 99 aa1.96□□□□□ -2.1
XRN1-202ENST00000392981 KRTAP9-6A0A140TA67 174 aa1.96□□□□□ -2.1
XRN1-202ENST00000392981 KRTAP9-7A8MTY7 169 aa1.96□□□□□ -2.1
XRN1-202ENST00000392981 PKHD1L1Q86WI1 4243 aa1.96□□□□□ -2.1
XRN1-202ENST00000392981 ACANP16112 2415 aa1.96□□□□□ -2.1
XRN1-202ENST00000392981 PP632Q6XCG6 107 aa1.96□□□□□ -2.1
XRN1-202ENST00000392981 RYR2Q92736 4967 aa1.96□□□□□ -2.1
XRN1-202ENST00000392981 DNAH17Q9UFH2 4485 aa1.95□□□□□ -2.1
XRN1-202ENST00000392981 PTPN13Q12923 2485 aa1.94□□□□□ -2.1
XRN1-202ENST00000392981 HIVEP1P15822 2718 aa1.94□□□□□ -2.1
XRN1-202ENST00000392981 SPTBN4Q9H254 2564 aa1.94□□□□□ -2.1
XRN1-202ENST00000392981 LCE5AQ5TCM9 118 aa1.93□□□□□ -2.1
XRN1-202ENST00000392981 PIEZO1Q92508 2521 aa1.93□□□□□ -2.1
XRN1-202ENST00000392981 DNAH5Q8TE73 4624 aa1.93□□□□□ -2.1
XRN1-202ENST00000392981 C9orf92A6NGG3 77 aa1.93□□□□□ -2.1
XRN1-202ENST00000392981 KCNQ1DNQ9H478 68 aa1.93□□□□□ -2.1
XRN1-202ENST00000392981 NCOR2Q9Y618 2525 aa1.92□□□□□ -2.1
XRN1-202ENST00000392981 TLN2Q9Y4G6 2542 aa1.92□□□□□ -2.1
XRN1-202ENST00000392981 KRTAP26-1Q6PEX3 210 aa1.92□□□□□ -2.1
XRN1-202ENST00000392981 RPL37P61927 97 aaKnown RBP1.92□□□□□ -2.1
XRN1-202ENST00000392981 HSPG2P98160 4391 aa1.92□□□□□ -2.1
XRN1-202ENST00000392981 SPATA8Q6RVD6 105 aa1.92□□□□□ -2.1
XRN1-202ENST00000392981 NBDYA0A0U1RRE5 68 aa1.91□□□□□ -2.1
XRN1-202ENST00000392981 EPPK1P58107 5090 aaKnown RBP1.91□□□□□ -2.1
XRN1-202ENST00000392981 KRTAP13-2Q52LG2 175 aa1.91□□□□□ -2.1
XRN1-202ENST00000392981 LRRK2Q5S007 2527 aa1.91□□□□□ -2.1
XRN1-202ENST00000392981 POLQO75417 2590 aa1.9□□□□□ -2.11
XRN1-202ENST00000392981 GVQW2A0A096LPI5 108 aaPredicted RBP1.9□□□□□ -2.11
XRN1-202ENST00000392981 INE1O15225 51 aa1.89□□□□□ -2.11
XRN1-202ENST00000392981 SPRR4Q96PI1 79 aa1.89□□□□□ -2.11
XRN1-202ENST00000392981 DMBT1Q9UGM3 2413 aaPredicted RBP1.88□□□□□ -2.11
XRN1-202ENST00000392981 ZFYVE26Q68DK2 2539 aa1.88□□□□□ -2.11
XRN1-202ENST00000392981 ANKHD1Q8IWZ3 2542 aaKnown RBP1.88□□□□□ -2.11
XRN1-202ENST00000392981 TGP01266 2768 aa1.88□□□□□ -2.11
XRN1-202ENST00000392981 ABCA13Q86UQ4 5058 aa1.88□□□□□ -2.11
XRN1-202ENST00000392981 H3BNG1 76 aa1.87□□□□□ -2.11
XRN1-202ENST00000392981 Q6ZSA8 131 aa1.87□□□□□ -2.11
XRN1-202ENST00000392981 MUC6Q6W4X9 2439 aa1.87□□□□□ -2.11
XRN1-202ENST00000392981 CEP295Q9C0D2 2601 aa1.87□□□□□ -2.11
XRN1-202ENST00000392981 PCLOQ9Y6V0 5065 aa1.87□□□□□ -2.11
XRN1-202ENST00000392981 CR1P17927 2039 aa1.87□□□□□ -2.11
XRN1-202ENST00000392981 M0R2T5 61 aa1.86□□□□□ -2.11
XRN1-202ENST00000392981 KRTAP4-5Q9BYR2 181 aa1.86□□□□□ -2.11
XRN1-202ENST00000392981 ITPR3Q14573 2671 aa1.86□□□□□ -2.11
XRN1-202ENST00000392981 USP9XQ93008 2570 aaPredicted RBP1.86□□□□□ -2.11
XRN1-202ENST00000392981 KLK9Q2XQG4 91 aa1.86□□□□□ -2.11
XRN1-202ENST00000392981 Q6ZRN7 208 aaPredicted RBP1.86□□□□□ -2.11
XRN1-202ENST00000392981 RYR1P21817 5038 aa1.85□□□□□ -2.11
XRN1-202ENST00000392981 LPAP08519 4548 aa1.85□□□□□ -2.11
XRN1-202ENST00000392981 A0A096LNT2 108 aa1.85□□□□□ -2.11
XRN1-202ENST00000392981 TENM2Q9NT68 2774 aa1.85□□□□□ -2.11
XRN1-202ENST00000392981 S4R3F8 94 aa1.85□□□□□ -2.11
XRN1-202ENST00000392981 TNXBP22105 4242 aa1.84□□□□□ -2.11
XRN1-202ENST00000392981 HELZ2Q9BYK8 2649 aaKnown RBP1.84□□□□□ -2.11
XRN1-202ENST00000392981 KRTAP1-4P0C5Y4 121 aa1.84□□□□□ -2.11
XRN1-202ENST00000392981 U3KQA8 63 aa1.84□□□□□ -2.11
XRN1-202ENST00000392981 HECTD1Q9ULT8 2610 aa1.84□□□□□ -2.12
XRN1-202ENST00000392981 TLN1Q9Y490 2541 aaKnown RBP1.84□□□□□ -2.12
XRN1-202ENST00000392981 KRTAP10-11P60412 298 aa1.84□□□□□ -2.12
XRN1-202ENST00000392981 M0QZ58 72 aa1.83□□□□□ -2.12
XRN1-202ENST00000392981 EPG5Q9HCE0 2579 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms