RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 SPINK1P00995 79 aa12.29□□□□□ -0.44
SPHK1-202ENST00000392496 IGHV6-1A0A0B4J1U7 121 aa12.28□□□□□ -0.44
SPHK1-202ENST00000392496 RYR1P21817 5038 aa12.28□□□□□ -0.44
SPHK1-202ENST00000392496 hDV103S1A0JD37 113 aa12.27□□□□□ -0.45
SPHK1-202ENST00000392496 KLKP1Q107X0 134 aa12.26□□□□□ -0.45
SPHK1-202ENST00000392496 C1orf195Q5TG92 126 aa12.26□□□□□ -0.45
SPHK1-202ENST00000392496 PKHD1L1Q86WI1 4243 aa12.26□□□□□ -0.45
SPHK1-202ENST00000392496 CYSTM1Q9H1C7 97 aa12.25□□□□□ -0.45
SPHK1-202ENST00000392496 HSPG2P98160 4391 aa12.25□□□□□ -0.45
SPHK1-202ENST00000392496 SPAG11AQ6PDA7 123 aa12.25□□□□□ -0.45
SPHK1-202ENST00000392496 LINC00304Q8N9R0 145 aa12.25□□□□□ -0.45
SPHK1-202ENST00000392496 RPS29P62273 56 aaKnown RBP12.23□□□□□ -0.45
SPHK1-202ENST00000392496 TMEM254Q8TBM7 123 aa12.23□□□□□ -0.45
SPHK1-202ENST00000392496 C5orf47Q569G3 176 aa12.2□□□□□ -0.46
SPHK1-202ENST00000392496 SNURFQ9Y675 71 aa12.2□□□□□ -0.46
SPHK1-202ENST00000392496 C8orf87E5RJ46 101 aa12.18□□□□□ -0.46
SPHK1-202ENST00000392496 A0A0U1RQV1 116 aa12.18□□□□□ -0.46
SPHK1-202ENST00000392496 NOTCH2NLQ7Z3S9 236 aa12.18□□□□□ -0.46
SPHK1-202ENST00000392496 MRPL34Q9BQ48 92 aaKnown RBP12.15□□□□□ -0.46
SPHK1-202ENST00000392496 TMEM258P61165 79 aa12.13□□□□□ -0.47
SPHK1-202ENST00000392496 NDUFC1O43677 76 aa12.13□□□□□ -0.47
SPHK1-202ENST00000392496 TP53AIP1Q9HCN2 124 aa12.12□□□□□ -0.47
SPHK1-202ENST00000392496 H7BZZ5 65 aa12.11□□□□□ -0.47
SPHK1-202ENST00000392496 MP68P56378 58 aa12.09□□□□□ -0.47
SPHK1-202ENST00000392496 LINC00313P59037 77 aa12.09□□□□□ -0.47
SPHK1-202ENST00000392496 ZCCHC13Q8WW36 166 aaKnown RBP12.07□□□□□ -0.48
SPHK1-202ENST00000392496 KRTAP17-1Q9BYP8 105 aa12.06□□□□□ -0.48
SPHK1-202ENST00000392496 H0Y9P7 68 aa12.05□□□□□ -0.48
SPHK1-202ENST00000392496 H3BPC8 53 aa12.05□□□□□ -0.48
SPHK1-202ENST00000392496 NDUFS5O43920 106 aa12.05□□□□□ -0.48
SPHK1-202ENST00000392496 HERC2O95714 4834 aa12.04□□□□□ -0.48
SPHK1-202ENST00000392496 TRAV22A0A0B4J277 110 aa12.02□□□□□ -0.48
SPHK1-202ENST00000392496 KRTAP4-5Q9BYR2 181 aa12.02□□□□□ -0.49
SPHK1-202ENST00000392496 KRTAP10-8P60410 259 aa12□□□□□ -0.49
SPHK1-202ENST00000392496 LINC00208Q96KT6 92 aa12□□□□□ -0.49
SPHK1-202ENST00000392496 FAM236DA0A1B0GTK5 79 aa11.96□□□□□ -0.49
SPHK1-202ENST00000392496 KRTAP16-1A8MUX0 517 aa11.96□□□□□ -0.49
SPHK1-202ENST00000392496 FAM236CP0DP71 79 aa11.96□□□□□ -0.49
SPHK1-202ENST00000392496 Q8N9P0 234 aaPredicted RBP11.95□□□□□ -0.5
SPHK1-202ENST00000392496 C1orf64Q8NEQ6 169 aa11.94□□□□□ -0.5
SPHK1-202ENST00000392496 OXTP01178 125 aa11.92□□□□□ -0.5
SPHK1-202ENST00000392496 FLG2Q5D862 2391 aaPredicted RBP11.92□□□□□ -0.5
SPHK1-202ENST00000392496 ATP5EP56381 51 aaPredicted RBP11.91□□□□□ -0.5
SPHK1-202ENST00000392496 TNXBP22105 4242 aa11.91□□□□□ -0.5
SPHK1-202ENST00000392496 LRP1Q07954 4544 aaKnown RBP11.89□□□□□ -0.51
SPHK1-202ENST00000392496 FAT3Q8TDW7 4589 aa11.89□□□□□ -0.51
SPHK1-202ENST00000392496 KRTAP13-3Q3SY46 172 aa11.87□□□□□ -0.51
SPHK1-202ENST00000392496 Q5W150 140 aa11.86□□□□□ -0.51
SPHK1-202ENST00000392496 J3QL48 77 aa11.82□□□□□ -0.52
SPHK1-202ENST00000392496 RPS28P62857 69 aaKnown RBP11.82□□□□□ -0.52
SPHK1-202ENST00000392496 RETNLBQ9BQ08 111 aa11.82□□□□□ -0.52
SPHK1-202ENST00000392496 ABCA13Q86UQ4 5058 aa11.79□□□□□ -0.52
SPHK1-202ENST00000392496 LOC101927531A0A1B0GV80 90 aa11.79□□□□□ -0.52
SPHK1-202ENST00000392496 MT1HL1P0DM35 61 aa11.76□□□□□ -0.53
SPHK1-202ENST00000392496 SERP1Q9Y6X1 66 aa11.76□□□□□ -0.53
SPHK1-202ENST00000392496 SPANXA2-OT1Q8N9U9 137 aa11.75□□□□□ -0.53
SPHK1-202ENST00000392496 MYCBP2O75592 4640 aa11.73□□□□□ -0.53
SPHK1-202ENST00000392496 C9orf92A6NGG3 77 aa11.72□□□□□ -0.53
SPHK1-202ENST00000392496 FP248Q71RG6 208 aaPredicted RBP11.71□□□□□ -0.54
SPHK1-202ENST00000392496 CYP4F30PQ9H0H9 118 aa11.71□□□□□ -0.54
SPHK1-202ENST00000392496 PCOTHQ58A44 107 aa11.7□□□□□ -0.54
SPHK1-202ENST00000392496 C20orf166-AS1Q96NR2 134 aa11.69□□□□□ -0.54
SPHK1-202ENST00000392496 PCLOQ9Y6V0 5065 aa11.68□□□□□ -0.54
SPHK1-202ENST00000392496 A8MUU9 505 aa11.68□□□□□ -0.54
SPHK1-202ENST00000392496 IGKV2-30P06310 120 aa11.66□□□□□ -0.54
SPHK1-202ENST00000392496 IGLV7-46A0A075B6I9 117 aa11.65□□□□□ -0.54
SPHK1-202ENST00000392496 PRR4Q16378 134 aa11.64□□□□□ -0.55
SPHK1-202ENST00000392496 DMBT1Q9UGM3 2413 aaPredicted RBP11.64□□□□□ -0.55
SPHK1-202ENST00000392496 Q75L30 129 aa11.55□□□□□ -0.56
SPHK1-202ENST00000392496 IGKV2D-30A0A075B6S6 120 aa11.53□□□□□ -0.56
SPHK1-202ENST00000392496 HRES1P13985 223 aa11.5□□□□□ -0.57
SPHK1-202ENST00000392496 C7orf65Q6ZTY9 151 aa11.49□□□□□ -0.57
SPHK1-202ENST00000392496 SMIM26A0A096LP01 95 aa11.48□□□□□ -0.57
SPHK1-202ENST00000392496 XP32Q5T750 250 aa11.41□□□□□ -0.58
SPHK1-202ENST00000392496 RPL37P61927 97 aaKnown RBP11.4□□□□□ -0.58
SPHK1-202ENST00000392496 COA5Q86WW8 74 aa11.39□□□□□ -0.59
SPHK1-202ENST00000392496 DMAC1Q96GE9 116 aa11.38□□□□□ -0.59
SPHK1-202ENST00000392496 ATP11AUNQ6ZP68 121 aa11.36□□□□□ -0.59
SPHK1-202ENST00000392496 ACYP2P14621 99 aa11.34□□□□□ -0.59
SPHK1-202ENST00000392496 TPRXLQ17RH7 258 aa11.33□□□□□ -0.59
SPHK1-202ENST00000392496 SPINK7P58062 85 aa11.31□□□□□ -0.6
SPHK1-202ENST00000392496 HERC1Q15751 4861 aa11.24□□□□□ -0.61
SPHK1-202ENST00000392496 MPLKIPQ8TAP9 179 aa11.22□□□□□ -0.61
SPHK1-202ENST00000392496 A8MUN3 132 aa11.21□□□□□ -0.61
SPHK1-202ENST00000392496 C4orf26Q17RF5 130 aa11.21□□□□□ -0.61
SPHK1-202ENST00000392496 Q1T7F1 81 aa11.21□□□□□ -0.61
SPHK1-202ENST00000392496 V9GYY9 64 aa11.16□□□□□ -0.62
SPHK1-202ENST00000392496 CHKB-CPT1BH3BT56 60 aa11.15□□□□□ -0.62
SPHK1-202ENST00000392496 COX6B2Q6YFQ2 88 aa11.08□□□□□ -0.64
SPHK1-202ENST00000392496 KRTAP3-1Q9BYR8 98 aa11.08□□□□□ -0.64
SPHK1-202ENST00000392496 LPAP08519 4548 aa11.05□□□□□ -0.64
SPHK1-202ENST00000392496 LRP2P98164 4655 aa11.03□□□□□ -0.64
SPHK1-202ENST00000392496 LINC01558Q9Y6Z2 57 aa11.02□□□□□ -0.65
SPHK1-202ENST00000392496 PSPHP1O15172 72 aa10.97□□□□□ -0.65
SPHK1-202ENST00000392496 HMCN2Q8NDA2 5059 aa10.97□□□□□ -0.65
SPHK1-202ENST00000392496 SEC61BP60468 96 aaKnown RBP10.94□□□□□ -0.66
SPHK1-202ENST00000392496 PRR15LQ9BU68 103 aa10.93□□□□□ -0.66
SPHK1-202ENST00000392496 Q5VV11 94 aa10.9□□□□□ -0.67
SPHK1-202ENST00000392496 SPTSSBQ8NFR3 76 aa10.9□□□□□ -0.67
SPHK1-202ENST00000392496 RBM12B-AS1Q9P1G2 102 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms