RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 H0Y9P7 68 aa11.09□□□□□ -0.63
ERCC2-203ENST00000391944 H3BPC8 53 aa11.08□□□□□ -0.64
ERCC2-203ENST00000391944 LINC00208Q96KT6 92 aa11.08□□□□□ -0.64
ERCC2-203ENST00000391944 Q5XG85 94 aa11.08□□□□□ -0.64
ERCC2-203ENST00000391944 TP53AIP1Q9HCN2 124 aa11.07□□□□□ -0.64
ERCC2-203ENST00000391944 NOTCH2NLQ7Z3S9 236 aa11.07□□□□□ -0.64
ERCC2-203ENST00000391944 PLA2G1BP04054 148 aaKnown RBP11.06□□□□□ -0.64
ERCC2-203ENST00000391944 MRPL34Q9BQ48 92 aaKnown RBP11.05□□□□□ -0.64
ERCC2-203ENST00000391944 RYR2Q92736 4967 aa11.04□□□□□ -0.64
ERCC2-203ENST00000391944 TRAV22A0A0B4J277 110 aa11.04□□□□□ -0.64
ERCC2-203ENST00000391944 C1orf195Q5TG92 126 aa11□□□□□ -0.65
ERCC2-203ENST00000391944 C1orf64Q8NEQ6 169 aa11□□□□□ -0.65
ERCC2-203ENST00000391944 NDUFS5O43920 106 aa10.99□□□□□ -0.65
ERCC2-203ENST00000391944 SMR3BP02814 79 aaPredicted RBP10.98□□□□□ -0.65
ERCC2-203ENST00000391944 TYMSOSQ8TAI1 123 aa10.98□□□□□ -0.65
ERCC2-203ENST00000391944 C8orf87E5RJ46 101 aa10.97□□□□□ -0.65
ERCC2-203ENST00000391944 LIMD2Q9BT23 127 aa10.97□□□□□ -0.65
ERCC2-203ENST00000391944 APOBP04114 4563 aaKnown RBP10.96□□□□□ -0.65
ERCC2-203ENST00000391944 KMT2CQ8NEZ4 4911 aaKnown RBP10.96□□□□□ -0.65
ERCC2-203ENST00000391944 C4orf48Q5BLP8 95 aa10.95□□□□□ -0.66
ERCC2-203ENST00000391944 SVIPQ8NHG7 77 aa10.93□□□□□ -0.66
ERCC2-203ENST00000391944 SPINK1P00995 79 aa10.92□□□□□ -0.66
ERCC2-203ENST00000391944 CYP4F30PQ9H0H9 118 aa10.92□□□□□ -0.66
ERCC2-203ENST00000391944 LINC00313P59037 77 aa10.91□□□□□ -0.66
ERCC2-203ENST00000391944 SMIM26A0A096LP01 95 aa10.9□□□□□ -0.67
ERCC2-203ENST00000391944 KRTAP10-4P60372 401 aaPredicted RBP10.9□□□□□ -0.67
ERCC2-203ENST00000391944 PRR26Q8N8Z3 221 aa10.9□□□□□ -0.67
ERCC2-203ENST00000391944 SPANXA2-OT1Q8N9U9 137 aa10.9□□□□□ -0.67
ERCC2-203ENST00000391944 FAT1Q14517 4588 aa10.88□□□□□ -0.67
ERCC2-203ENST00000391944 PRR4Q16378 134 aa10.87□□□□□ -0.67
ERCC2-203ENST00000391944 LINC00304Q8N9R0 145 aa10.84□□□□□ -0.67
ERCC2-203ENST00000391944 SPAG11AQ6PDA7 123 aa10.83□□□□□ -0.68
ERCC2-203ENST00000391944 FP248Q71RG6 208 aaPredicted RBP10.83□□□□□ -0.68
ERCC2-203ENST00000391944 RPS29P62273 56 aaKnown RBP10.83□□□□□ -0.68
ERCC2-203ENST00000391944 KRTAP13-3Q3SY46 172 aa10.83□□□□□ -0.68
ERCC2-203ENST00000391944 Q5W150 140 aa10.83□□□□□ -0.68
ERCC2-203ENST00000391944 Q8N9P0 234 aaPredicted RBP10.83□□□□□ -0.68
ERCC2-203ENST00000391944 KRTAP16-1A8MUX0 517 aa10.79□□□□□ -0.68
ERCC2-203ENST00000391944 PCOTHQ58A44 107 aa10.79□□□□□ -0.68
ERCC2-203ENST00000391944 IGLV7-46A0A075B6I9 117 aa10.78□□□□□ -0.68
ERCC2-203ENST00000391944 C4orf26Q17RF5 130 aa10.78□□□□□ -0.68
ERCC2-203ENST00000391944 LOC101927531A0A1B0GV80 90 aa10.76□□□□□ -0.69
ERCC2-203ENST00000391944 FAM229AH3BQW9 127 aa10.73□□□□□ -0.69
ERCC2-203ENST00000391944 PKHD1L1Q86WI1 4243 aa10.72□□□□□ -0.69
ERCC2-203ENST00000391944 MPLKIPQ8TAP9 179 aa10.66□□□□□ -0.7
ERCC2-203ENST00000391944 RYR3Q15413 4870 aa10.66□□□□□ -0.7
ERCC2-203ENST00000391944 RETNLBQ9BQ08 111 aa10.64□□□□□ -0.71
ERCC2-203ENST00000391944 IGKV2-30P06310 120 aa10.6□□□□□ -0.71
ERCC2-203ENST00000391944 Q1T7F1 81 aa10.59□□□□□ -0.71
ERCC2-203ENST00000391944 COA5Q86WW8 74 aa10.59□□□□□ -0.71
ERCC2-203ENST00000391944 HSPG2P98160 4391 aa10.59□□□□□ -0.71
ERCC2-203ENST00000391944 Q5VSD8 79 aa10.55□□□□□ -0.72
ERCC2-203ENST00000391944 HRES1P13985 223 aa10.53□□□□□ -0.72
ERCC2-203ENST00000391944 RYR1P21817 5038 aa10.51□□□□□ -0.73
ERCC2-203ENST00000391944 KRTAP10-8P60410 259 aa10.49□□□□□ -0.73
ERCC2-203ENST00000391944 V9GYY9 64 aa10.49□□□□□ -0.73
ERCC2-203ENST00000391944 FLG2Q5D862 2391 aaPredicted RBP10.48□□□□□ -0.73
ERCC2-203ENST00000391944 Q8N1X5 172 aa10.48□□□□□ -0.73
ERCC2-203ENST00000391944 IGKV2D-30A0A075B6S6 120 aa10.47□□□□□ -0.73
ERCC2-203ENST00000391944 C9orf92A6NGG3 77 aa10.47□□□□□ -0.73
ERCC2-203ENST00000391944 LRP1Q07954 4544 aaKnown RBP10.47□□□□□ -0.73
ERCC2-203ENST00000391944 TNXBP22105 4242 aa10.46□□□□□ -0.74
ERCC2-203ENST00000391944 C20orf166-AS1Q96NR2 134 aa10.45□□□□□ -0.74
ERCC2-203ENST00000391944 A8MUU9 505 aa10.44□□□□□ -0.74
ERCC2-203ENST00000391944 ACYP2P14621 99 aa10.44□□□□□ -0.74
ERCC2-203ENST00000391944 DMAC1Q96GE9 116 aa10.44□□□□□ -0.74
ERCC2-203ENST00000391944 KRTAP17-1Q9BYP8 105 aa10.41□□□□□ -0.74
ERCC2-203ENST00000391944 PSPHP1O15172 72 aa10.4□□□□□ -0.74
ERCC2-203ENST00000391944 FAT3Q8TDW7 4589 aa10.39□□□□□ -0.75
ERCC2-203ENST00000391944 C7orf65Q6ZTY9 151 aa10.38□□□□□ -0.75
ERCC2-203ENST00000391944 A8MUN3 132 aa10.36□□□□□ -0.75
ERCC2-203ENST00000391944 KIAA1109Q2LD37 5005 aa10.36□□□□□ -0.75
ERCC2-203ENST00000391944 Q5VV11 94 aa10.3□□□□□ -0.76
ERCC2-203ENST00000391944 LINC01558Q9Y6Z2 57 aa10.3□□□□□ -0.76
ERCC2-203ENST00000391944 PRR15LQ9BU68 103 aa10.29□□□□□ -0.76
ERCC2-203ENST00000391944 Q75L30 129 aa10.28□□□□□ -0.76
ERCC2-203ENST00000391944 CHKB-CPT1BH3BT56 60 aa10.28□□□□□ -0.76
ERCC2-203ENST00000391944 BRK1Q8WUW1 75 aa10.28□□□□□ -0.76
ERCC2-203ENST00000391944 DMBT1Q9UGM3 2413 aaPredicted RBP10.26□□□□□ -0.77
ERCC2-203ENST00000391944 PRO0628Q9UI54 55 aa10.25□□□□□ -0.77
ERCC2-203ENST00000391944 EPPK1P58107 5090 aaKnown RBP10.25□□□□□ -0.77
ERCC2-203ENST00000391944 MT1HL1P0DM35 61 aa10.23□□□□□ -0.77
ERCC2-203ENST00000391944 MYCBP2O75592 4640 aa10.21□□□□□ -0.78
ERCC2-203ENST00000391944 SPINK7P58062 85 aa10.18□□□□□ -0.78
ERCC2-203ENST00000391944 ATP11AUNQ6ZP68 121 aa10.11□□□□□ -0.79
ERCC2-203ENST00000391944 RPL37P61927 97 aaKnown RBP10.1□□□□□ -0.79
ERCC2-203ENST00000391944 XP32Q5T750 250 aa10.08□□□□□ -0.8
ERCC2-203ENST00000391944 KRTAP3-1Q9BYR8 98 aa10.06□□□□□ -0.8
ERCC2-203ENST00000391944 A6NED7 52 aa10.06□□□□□ -0.8
ERCC2-203ENST00000391944 A0A1B0GU69 56 aa10□□□□□ -0.81
ERCC2-203ENST00000391944 KRTAP4-5Q9BYR2 181 aa10□□□□□ -0.81
ERCC2-203ENST00000391944 A8MU10 97 aa9.99□□□□□ -0.81
ERCC2-203ENST00000391944 COX6B2Q6YFQ2 88 aa9.99□□□□□ -0.81
ERCC2-203ENST00000391944 LCA10Q71F78 164 aa9.98□□□□□ -0.81
ERCC2-203ENST00000391944 SPTSSBQ8NFR3 76 aa9.95□□□□□ -0.82
ERCC2-203ENST00000391944 CDC42SE1Q9NRR8 79 aa9.94□□□□□ -0.82
ERCC2-203ENST00000391944 TPRXLQ17RH7 258 aa9.91□□□□□ -0.82
ERCC2-203ENST00000391944 SEC61GP60059 68 aa9.81□□□□□ -0.84
ERCC2-203ENST00000391944 ABCA13Q86UQ4 5058 aa9.8□□□□□ -0.84
ERCC2-203ENST00000391944 LRP2P98164 4655 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms