RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 C9orf92A6NGG3 77 aa7.87□□□□□ -1.15
TRAPPC9-201ENST00000389328 Q6ZR54 194 aa7.87□□□□□ -1.15
TRAPPC9-201ENST00000389328 LINC01554Q52M75 96 aa7.86□□□□□ -1.15
TRAPPC9-201ENST00000389328 TENM3Q9P273 2699 aa7.84□□□□□ -1.15
TRAPPC9-201ENST00000389328 VWFP04275 2813 aa7.83□□□□□ -1.16
TRAPPC9-201ENST00000389328 DMBT1Q9UGM3 2413 aaPredicted RBP7.82□□□□□ -1.16
TRAPPC9-201ENST00000389328 PLAC8Q9NZF1 115 aa7.8□□□□□ -1.16
TRAPPC9-201ENST00000389328 TENM4Q6N022 2769 aa7.8□□□□□ -1.16
TRAPPC9-201ENST00000389328 A6NN06 94 aa7.8□□□□□ -1.16
TRAPPC9-201ENST00000389328 LINC00304Q8N9R0 145 aa7.8□□□□□ -1.16
TRAPPC9-201ENST00000389328 SPINT4Q6UDR6 99 aa7.79□□□□□ -1.16
TRAPPC9-201ENST00000389328 TENM1Q9UKZ4 2725 aa7.78□□□□□ -1.16
TRAPPC9-201ENST00000389328 CSAG1Q6PB30 78 aa7.78□□□□□ -1.16
TRAPPC9-201ENST00000389328 BSNQ9UPA5 3926 aa7.77□□□□□ -1.17
TRAPPC9-201ENST00000389328 LINC00483Q53H64 154 aa7.76□□□□□ -1.17
TRAPPC9-201ENST00000389328 DMAC1Q96GE9 116 aa7.76□□□□□ -1.17
TRAPPC9-201ENST00000389328 SMR3BP02814 79 aaPredicted RBP7.76□□□□□ -1.17
TRAPPC9-201ENST00000389328 PDZD2O15018 2839 aa7.75□□□□□ -1.17
TRAPPC9-201ENST00000389328 CSMD2Q7Z408 3487 aa7.73□□□□□ -1.17
TRAPPC9-201ENST00000389328 A0A1B0GU33 70 aa7.71□□□□□ -1.17
TRAPPC9-201ENST00000389328 A0A0D9SG42 100 aa7.71□□□□□ -1.18
TRAPPC9-201ENST00000389328 ADM2Q7Z4H4 148 aa7.71□□□□□ -1.18
TRAPPC9-201ENST00000389328 H3BS24 57 aa7.69□□□□□ -1.18
TRAPPC9-201ENST00000389328 KRTAP13-1Q8IUC0 172 aa7.66□□□□□ -1.18
TRAPPC9-201ENST00000389328 CRIPTQ9P021 101 aa7.66□□□□□ -1.18
TRAPPC9-201ENST00000389328 FBN1P35555 2871 aaKnown RBP7.66□□□□□ -1.18
TRAPPC9-201ENST00000389328 PKD1L1Q8TDX9 2849 aa7.66□□□□□ -1.18
TRAPPC9-201ENST00000389328 SPATA8Q6RVD6 105 aa7.62□□□□□ -1.19
TRAPPC9-201ENST00000389328 Q6ZRN7 208 aaPredicted RBP7.6□□□□□ -1.19
TRAPPC9-201ENST00000389328 J3QL48 77 aa7.58□□□□□ -1.2
TRAPPC9-201ENST00000389328 KRTAP10-2P60368 255 aa7.58□□□□□ -1.2
TRAPPC9-201ENST00000389328 NBPF19A0A087WUL8 3843 aa7.57□□□□□ -1.2
TRAPPC9-201ENST00000389328 VPS13CQ709C8 3753 aa7.54□□□□□ -1.2
TRAPPC9-201ENST00000389328 OTOGQ6ZRI0 2925 aa7.53□□□□□ -1.2
TRAPPC9-201ENST00000389328 KRTAP10-1P60331 282 aa7.52□□□□□ -1.21
TRAPPC9-201ENST00000389328 ASB16-AS1Q495Z4 193 aa7.5□□□□□ -1.21
TRAPPC9-201ENST00000389328 ZFHX3Q15911 3703 aa7.5□□□□□ -1.21
TRAPPC9-201ENST00000389328 KRTAP21-3Q3LHN1 58 aa7.49□□□□□ -1.21
TRAPPC9-201ENST00000389328 SRRM2Q9UQ35 2752 aaKnown RBP7.46□□□□□ -1.21
TRAPPC9-201ENST00000389328 KRTAP13-2Q52LG2 175 aa7.46□□□□□ -1.22
TRAPPC9-201ENST00000389328 H1FX-AS1Q4G0G2 97 aa7.45□□□□□ -1.22
TRAPPC9-201ENST00000389328 TENM2Q9NT68 2774 aa7.45□□□□□ -1.22
TRAPPC9-201ENST00000389328 TGP01266 2768 aa7.44□□□□□ -1.22
TRAPPC9-201ENST00000389328 TRRAPQ9Y4A5 3859 aa7.4□□□□□ -1.22
TRAPPC9-201ENST00000389328 RPL37P61927 97 aaKnown RBP7.36□□□□□ -1.23
TRAPPC9-201ENST00000389328 ROMO1P60602 79 aa7.35□□□□□ -1.23
TRAPPC9-201ENST00000389328 KRTAP25-1Q3LHN0 102 aa7.35□□□□□ -1.23
TRAPPC9-201ENST00000389328 COX6B2Q6YFQ2 88 aa7.3□□□□□ -1.24
TRAPPC9-201ENST00000389328 S4R3F8 94 aa7.29□□□□□ -1.24
TRAPPC9-201ENST00000389328 Q6ZSA8 131 aa7.26□□□□□ -1.25
TRAPPC9-201ENST00000389328 ANK3Q12955 4377 aaKnown RBP7.25□□□□□ -1.25
TRAPPC9-201ENST00000389328 KRTAP13-3Q3SY46 172 aa7.23□□□□□ -1.25
TRAPPC9-201ENST00000389328 FBN3Q75N90 2809 aa7.19□□□□□ -1.26
TRAPPC9-201ENST00000389328 KRTAP16-1A8MUX0 517 aa7.18□□□□□ -1.26
TRAPPC9-201ENST00000389328 H0YAA0 97 aa7.18□□□□□ -1.26
TRAPPC9-201ENST00000389328 ZNF469Q96JG9 3925 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC9-201ENST00000389328 A8MUU9 505 aa7.17□□□□□ -1.26
TRAPPC9-201ENST00000389328 KRTAP1-4P0C5Y4 121 aa7.16□□□□□ -1.26
TRAPPC9-201ENST00000389328 COL7A1Q02388 2944 aa7.12□□□□□ -1.27
TRAPPC9-201ENST00000389328 RPS29P62273 56 aaKnown RBP7.11□□□□□ -1.27
TRAPPC9-201ENST00000389328 LUZP6Q538Z0 58 aa7.09□□□□□ -1.27
TRAPPC9-201ENST00000389328 R4GN34 69 aa7.09□□□□□ -1.28
TRAPPC9-201ENST00000389328 CAMK2N1Q7Z7J9 78 aa7.07□□□□□ -1.28
TRAPPC9-201ENST00000389328 CSMD3Q7Z407 3707 aa7.07□□□□□ -1.28
TRAPPC9-201ENST00000389328 C20orf166-AS1Q96NR2 134 aa7.07□□□□□ -1.28
TRAPPC9-201ENST00000389328 NDUFAF8A1L188 74 aa7.06□□□□□ -1.28
TRAPPC9-201ENST00000389328 AKAP9Q99996 3911 aa7.05□□□□□ -1.28
TRAPPC9-201ENST00000389328 M0QZ58 72 aa7.04□□□□□ -1.28
TRAPPC9-201ENST00000389328 C10orf95Q9H7T3 257 aa7.02□□□□□ -1.29
TRAPPC9-201ENST00000389328 Q5VSD8 79 aa7.01□□□□□ -1.29
TRAPPC9-201ENST00000389328 MEGF8Q7Z7M0 2845 aa7□□□□□ -1.29
TRAPPC9-201ENST00000389328 M0R2T5 61 aa6.84□□□□□ -1.31
TRAPPC9-201ENST00000389328 A0A0A0MQY5 61 aa6.83□□□□□ -1.32
TRAPPC9-201ENST00000389328 P0C880 135 aa6.83□□□□□ -1.32
TRAPPC9-201ENST00000389328 KRTAP3-1Q9BYR8 98 aa6.81□□□□□ -1.32
TRAPPC9-201ENST00000389328 SEC61BP60468 96 aaKnown RBP6.77□□□□□ -1.33
TRAPPC9-201ENST00000389328 XP32Q5T750 250 aa6.77□□□□□ -1.33
TRAPPC9-201ENST00000389328 HUWE1Q7Z6Z7 4374 aaKnown RBP6.74□□□□□ -1.33
TRAPPC9-201ENST00000389328 TPRXLQ17RH7 258 aa6.68□□□□□ -1.34
TRAPPC9-201ENST00000389328 KRTAP12-2P59991 146 aa6.64□□□□□ -1.35
TRAPPC9-201ENST00000389328 DNAH10Q8IVF4 4471 aa6.64□□□□□ -1.35
TRAPPC9-201ENST00000389328 KRTAP13-4Q3LI77 160 aa6.62□□□□□ -1.35
TRAPPC9-201ENST00000389328 PLAC4Q8WY50 150 aa6.62□□□□□ -1.35
TRAPPC9-201ENST00000389328 KRTAP10-6P60371 365 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC9-201ENST00000389328 KRTAP10-8P60410 259 aa6.57□□□□□ -1.36
TRAPPC9-201ENST00000389328 KRTAP12-1P59990 96 aa6.52□□□□□ -1.36
TRAPPC9-201ENST00000389328 PLECQ15149 4684 aaKnown RBP6.48□□□□□ -1.37
TRAPPC9-201ENST00000389328 TNP1P09430 55 aa6.45□□□□□ -1.38
TRAPPC9-201ENST00000389328 A0A1B0GVY2 172 aa6.45□□□□□ -1.38
TRAPPC9-201ENST00000389328 DNAH9Q9NYC9 4486 aa6.43□□□□□ -1.38
TRAPPC9-201ENST00000389328 DNAH1Q9P2D7 4330 aa6.42□□□□□ -1.38
TRAPPC9-201ENST00000389328 PP632Q6XCG6 107 aa6.41□□□□□ -1.38
TRAPPC9-201ENST00000389328 KRTAP3-2Q9BYR7 98 aa6.41□□□□□ -1.38
TRAPPC9-201ENST00000389328 KRTAP3-3Q9BYR6 98 aa6.4□□□□□ -1.38
TRAPPC9-201ENST00000389328 DNAH11Q96DT5 4516 aa6.39□□□□□ -1.39
TRAPPC9-201ENST00000389328 KRTAP15-1Q3LI76 137 aa6.32□□□□□ -1.4
TRAPPC9-201ENST00000389328 DNAH8Q96JB1 4490 aa6.31□□□□□ -1.4
TRAPPC9-201ENST00000389328 ANK2Q01484 3957 aa6.3□□□□□ -1.4
TRAPPC9-201ENST00000389328 STARD9Q9P2P6 4700 aa6.23□□□□□ -1.41
TRAPPC9-201ENST00000389328 DNAH5Q8TE73 4624 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms