RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 ZNF861PO60384 105 aa12.42□□□□□ -0.42
NKX3-2-201ENST00000382438 MAST4O15021 2626 aa12.4□□□□□ -0.42
NKX3-2-201ENST00000382438 NSD1Q96L73 2696 aaPredicted RBP12.39□□□□□ -0.43
NKX3-2-201ENST00000382438 ANAPC11Q9NYG5 84 aa12.38□□□□□ -0.43
NKX3-2-201ENST00000382438 NOTCH1P46531 2555 aa12.36□□□□□ -0.43
NKX3-2-201ENST00000382438 COL6A5A8TX70 2615 aa12.35□□□□□ -0.43
NKX3-2-201ENST00000382438 KRTAP10-11P60412 298 aa12.35□□□□□ -0.43
NKX3-2-201ENST00000382438 KRTAP1-5Q9BYS1 174 aa12.31□□□□□ -0.44
NKX3-2-201ENST00000382438 DNAH9Q9NYC9 4486 aa12.3□□□□□ -0.44
NKX3-2-201ENST00000382438 KRTAP13-1Q8IUC0 172 aa12.3□□□□□ -0.44
NKX3-2-201ENST00000382438 PANO1I0J062 215 aa12.29□□□□□ -0.44
NKX3-2-201ENST00000382438 INAFM1C9JVW0 142 aa12.26□□□□□ -0.45
NKX3-2-201ENST00000382438 ROMO1P60602 79 aa12.25□□□□□ -0.45
NKX3-2-201ENST00000382438 FLG2Q5D862 2391 aaPredicted RBP12.24□□□□□ -0.45
NKX3-2-201ENST00000382438 WWC2-AS2Q96NR7 200 aa12.21□□□□□ -0.45
NKX3-2-201ENST00000382438 FRAS1Q86XX4 4008 aa12.18□□□□□ -0.46
NKX3-2-201ENST00000382438 KRTAP25-1Q3LHN0 102 aa12.18□□□□□ -0.46
NKX3-2-201ENST00000382438 STAB1Q9NY15 2570 aa12.17□□□□□ -0.46
NKX3-2-201ENST00000382438 IGLV7-43P04211 117 aa12.16□□□□□ -0.46
NKX3-2-201ENST00000382438 SPINK1P00995 79 aa12.15□□□□□ -0.46
NKX3-2-201ENST00000382438 LINC00483Q53H64 154 aa12.14□□□□□ -0.47
NKX3-2-201ENST00000382438 IGKV2-30P06310 120 aa12.12□□□□□ -0.47
NKX3-2-201ENST00000382438 CRIPTQ9P021 101 aa12.11□□□□□ -0.47
NKX3-2-201ENST00000382438 DNAH8Q96JB1 4490 aa12.08□□□□□ -0.48
NKX3-2-201ENST00000382438 MEGF8Q7Z7M0 2845 aa12.08□□□□□ -0.48
NKX3-2-201ENST00000382438 IGKV2D-30A0A075B6S6 120 aa12.07□□□□□ -0.48
NKX3-2-201ENST00000382438 FAM229AH3BQW9 127 aa12.07□□□□□ -0.48
NKX3-2-201ENST00000382438 IGLV5-52A0A0A0MRZ9 124 aa12.06□□□□□ -0.48
NKX3-2-201ENST00000382438 LINC00304Q8N9R0 145 aa12.06□□□□□ -0.48
NKX3-2-201ENST00000382438 CIRBP-AS1Q8TBR5 109 aa12.06□□□□□ -0.48
NKX3-2-201ENST00000382438 A8MUU9 505 aa12.06□□□□□ -0.48
NKX3-2-201ENST00000382438 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.05□□□□□ -0.48
NKX3-2-201ENST00000382438 P0C880 135 aa12.02□□□□□ -0.49
NKX3-2-201ENST00000382438 C14orf177Q52M58 125 aa12.01□□□□□ -0.49
NKX3-2-201ENST00000382438 CMYA5Q8N3K9 4069 aa11.99□□□□□ -0.49
NKX3-2-201ENST00000382438 H0YAA0 97 aa11.99□□□□□ -0.49
NKX3-2-201ENST00000382438 PSORS1C2Q9UIG4 136 aa11.97□□□□□ -0.49
NKX3-2-201ENST00000382438 Q6ZSA8 131 aa11.96□□□□□ -0.49
NKX3-2-201ENST00000382438 HUWE1Q7Z6Z7 4374 aaKnown RBP11.96□□□□□ -0.5
NKX3-2-201ENST00000382438 UBE2DNLQ8IWF7 75 aa11.95□□□□□ -0.5
NKX3-2-201ENST00000382438 TGP01266 2768 aa11.94□□□□□ -0.5
NKX3-2-201ENST00000382438 DNAH7Q8WXX0 4024 aa11.93□□□□□ -0.5
NKX3-2-201ENST00000382438 STAB2Q8WWQ8 2551 aa11.92□□□□□ -0.5
NKX3-2-201ENST00000382438 Q8N1X5 172 aa11.9□□□□□ -0.5
NKX3-2-201ENST00000382438 DNAH17Q9UFH2 4485 aa11.89□□□□□ -0.51
NKX3-2-201ENST00000382438 SPACA4Q8TDM5 124 aa11.89□□□□□ -0.51
NKX3-2-201ENST00000382438 LY6G6CO95867 125 aa11.87□□□□□ -0.51
NKX3-2-201ENST00000382438 KRTAP16-1A8MUX0 517 aa11.82□□□□□ -0.52
NKX3-2-201ENST00000382438 TYMSOSQ8TAI1 123 aa11.82□□□□□ -0.52
NKX3-2-201ENST00000382438 SSBP3-AS1Q7Z2R9 100 aa11.81□□□□□ -0.52
NKX3-2-201ENST00000382438 DNAH3Q8TD57 4116 aa11.75□□□□□ -0.53
NKX3-2-201ENST00000382438 A0A1B0GU33 70 aa11.74□□□□□ -0.53
NKX3-2-201ENST00000382438 MGAM2Q2M2H8 2515 aa11.73□□□□□ -0.53
NKX3-2-201ENST00000382438 KRTAP24-1Q3LI83 254 aa11.68□□□□□ -0.54
NKX3-2-201ENST00000382438 APLNQ9ULZ1 77 aa11.66□□□□□ -0.54
NKX3-2-201ENST00000382438 PLECQ15149 4684 aaKnown RBP11.66□□□□□ -0.54
NKX3-2-201ENST00000382438 Q6ZRN7 208 aaPredicted RBP11.65□□□□□ -0.54
NKX3-2-201ENST00000382438 HECTD4Q9Y4D8 3996 aa11.65□□□□□ -0.54
NKX3-2-201ENST00000382438 SPINT4Q6UDR6 99 aa11.64□□□□□ -0.55
NKX3-2-201ENST00000382438 NBDYA0A0U1RRE5 68 aa11.64□□□□□ -0.55
NKX3-2-201ENST00000382438 H1FX-AS1Q4G0G2 97 aa11.62□□□□□ -0.55
NKX3-2-201ENST00000382438 VPS13DQ5THJ4 4388 aa11.61□□□□□ -0.55
NKX3-2-201ENST00000382438 NDUFAF8A1L188 74 aa11.58□□□□□ -0.56
NKX3-2-201ENST00000382438 FBN3Q75N90 2809 aa11.57□□□□□ -0.56
NKX3-2-201ENST00000382438 K7ERS5 55 aa11.53□□□□□ -0.56
NKX3-2-201ENST00000382438 DMBT1Q9UGM3 2413 aaPredicted RBP11.53□□□□□ -0.56
NKX3-2-201ENST00000382438 A0A087WTM6 91 aa11.52□□□□□ -0.57
NKX3-2-201ENST00000382438 KRTAP13-2Q52LG2 175 aa11.5□□□□□ -0.57
NKX3-2-201ENST00000382438 KMT2AQ03164 3969 aa11.49□□□□□ -0.57
NKX3-2-201ENST00000382438 TPRXLQ17RH7 258 aa11.45□□□□□ -0.58
NKX3-2-201ENST00000382438 C20orf166-AS1Q96NR2 134 aa11.43□□□□□ -0.58
NKX3-2-201ENST00000382438 COX6B2Q6YFQ2 88 aa11.41□□□□□ -0.58
NKX3-2-201ENST00000382438 C10orf95Q9H7T3 257 aa11.41□□□□□ -0.58
NKX3-2-201ENST00000382438 NUPR2A6NF83 97 aa11.4□□□□□ -0.59
NKX3-2-201ENST00000382438 KRTAP3-1Q9BYR8 98 aa11.39□□□□□ -0.59
NKX3-2-201ENST00000382438 DNAH2Q9P225 4427 aa11.38□□□□□ -0.59
NKX3-2-201ENST00000382438 DYNC2H1Q8NCM8 4307 aaKnown RBP11.36□□□□□ -0.59
NKX3-2-201ENST00000382438 DNAH11Q96DT5 4516 aa11.34□□□□□ -0.59
NKX3-2-201ENST00000382438 KRTAP15-1Q3LI76 137 aa11.33□□□□□ -0.6
NKX3-2-201ENST00000382438 A0A0A0MQY5 61 aa11.31□□□□□ -0.6
NKX3-2-201ENST00000382438 DNAH6Q9C0G6 4158 aa11.3□□□□□ -0.6
NKX3-2-201ENST00000382438 A0A0D9SG42 100 aa11.27□□□□□ -0.6
NKX3-2-201ENST00000382438 STARD9Q9P2P6 4700 aa11.25□□□□□ -0.61
NKX3-2-201ENST00000382438 RPL37P61927 97 aaKnown RBP11.22□□□□□ -0.61
NKX3-2-201ENST00000382438 LRP1BQ9NZR2 4599 aa11.19□□□□□ -0.62
NKX3-2-201ENST00000382438 KRTAP13-4Q3LI77 160 aa11.14□□□□□ -0.63
NKX3-2-201ENST00000382438 C9orf92A6NGG3 77 aa11.13□□□□□ -0.63
NKX3-2-201ENST00000382438 KRTAP1-4P0C5Y4 121 aa11.11□□□□□ -0.63
NKX3-2-201ENST00000382438 DNAH5Q8TE73 4624 aa11.08□□□□□ -0.64
NKX3-2-201ENST00000382438 DNHD1Q96M86 4753 aa11.02□□□□□ -0.65
NKX3-2-201ENST00000382438 KRTAP10-6P60371 365 aaPredicted RBP11.01□□□□□ -0.65
NKX3-2-201ENST00000382438 VPS13BQ7Z7G8 4022 aa11.01□□□□□ -0.65
NKX3-2-201ENST00000382438 KRTAP10-2P60368 255 aa10.98□□□□□ -0.65
NKX3-2-201ENST00000382438 PRKDCP78527 4128 aaKnown RBP10.98□□□□□ -0.65
NKX3-2-201ENST00000382438 S4R3F8 94 aa10.87□□□□□ -0.67
NKX3-2-201ENST00000382438 KRTAP12-2P59991 146 aa10.85□□□□□ -0.67
NKX3-2-201ENST00000382438 FAT2Q9NYQ8 4349 aa10.85□□□□□ -0.67
NKX3-2-201ENST00000382438 KRTAP3-2Q9BYR7 98 aa10.84□□□□□ -0.67
NKX3-2-201ENST00000382438 KRTAP10-1P60331 282 aa10.81□□□□□ -0.68
NKX3-2-201ENST00000382438 KRTAP3-3Q9BYR6 98 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms