RNA–Protein interactions for RNA: ENST00000382203.5

SMARCA2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-209ENST00000382203 MAST4O15021 2626 aa6.98□□□□□ -1.29
SMARCA2-209ENST00000382203 FLNCQ14315 2725 aa6.97□□□□□ -1.29
SMARCA2-209ENST00000382203 COL12A1Q99715 3063 aa6.97□□□□□ -1.29
SMARCA2-209ENST00000382203 NBEAL1Q6ZS30 2694 aa6.97□□□□□ -1.29
SMARCA2-209ENST00000382203 RELNP78509 3460 aa6.96□□□□□ -1.29
SMARCA2-209ENST00000382203 IGSF10Q6WRI0 2623 aa6.96□□□□□ -1.3
SMARCA2-209ENST00000382203 RPS29P62273 56 aaKnown RBP6.95□□□□□ -1.3
SMARCA2-209ENST00000382203 CFAP46Q8IYW2 2715 aa6.94□□□□□ -1.3
SMARCA2-209ENST00000382203 KRTAP10-8P60410 259 aa6.92□□□□□ -1.3
SMARCA2-209ENST00000382203 SMG1Q96Q15 3661 aaKnown RBP6.9□□□□□ -1.31
SMARCA2-209ENST00000382203 HRNRQ86YZ3 2850 aaPredicted RBP6.9□□□□□ -1.31
SMARCA2-209ENST00000382203 ITPR1Q14643 2758 aa6.88□□□□□ -1.31
SMARCA2-209ENST00000382203 SPENQ96T58 3664 aaKnown RBP6.85□□□□□ -1.31
SMARCA2-209ENST00000382203 ASH1LQ9NR48 2969 aaKnown RBP6.85□□□□□ -1.31
SMARCA2-209ENST00000382203 DCHS2Q6V1P9 2916 aa6.82□□□□□ -1.32
SMARCA2-209ENST00000382203 FLNAP21333 2647 aaKnown RBP6.81□□□□□ -1.32
SMARCA2-209ENST00000382203 ITPR3Q14573 2671 aa6.78□□□□□ -1.32
SMARCA2-209ENST00000382203 HELZ2Q9BYK8 2649 aaKnown RBP6.76□□□□□ -1.33
SMARCA2-209ENST00000382203 ZANQ9Y493 2812 aa6.76□□□□□ -1.33
SMARCA2-209ENST00000382203 NOTCH1P46531 2555 aa6.76□□□□□ -1.33
SMARCA2-209ENST00000382203 UTP20O75691 2785 aaKnown RBP6.75□□□□□ -1.33
SMARCA2-209ENST00000382203 BSNQ9UPA5 3926 aa6.75□□□□□ -1.33
SMARCA2-209ENST00000382203 H0YAA0 97 aa6.75□□□□□ -1.33
SMARCA2-209ENST00000382203 CHD6Q8TD26 2715 aa6.75□□□□□ -1.33
SMARCA2-209ENST00000382203 CRYBG3Q68DQ2 2970 aa6.74□□□□□ -1.33
SMARCA2-209ENST00000382203 TEX15Q9BXT5 2789 aa6.74□□□□□ -1.33
SMARCA2-209ENST00000382203 BAHCC1Q9P281 2608 aa6.71□□□□□ -1.34
SMARCA2-209ENST00000382203 FLNBO75369 2602 aaKnown RBP6.69□□□□□ -1.34
SMARCA2-209ENST00000382203 UNC79Q9P2D8 2635 aa6.69□□□□□ -1.34
SMARCA2-209ENST00000382203 KRTAP13-2Q52LG2 175 aa6.67□□□□□ -1.34
SMARCA2-209ENST00000382203 CSMD1Q96PZ7 3565 aa6.67□□□□□ -1.34
SMARCA2-209ENST00000382203 Q6ZRN7 208 aaPredicted RBP6.66□□□□□ -1.34
SMARCA2-209ENST00000382203 SVEP1Q4LDE5 3571 aa6.66□□□□□ -1.34
SMARCA2-209ENST00000382203 CELSR2Q9HCU4 2923 aa6.66□□□□□ -1.34
SMARCA2-209ENST00000382203 NSD1Q96L73 2696 aaPredicted RBP6.63□□□□□ -1.35
SMARCA2-209ENST00000382203 CELSR1Q9NYQ6 3014 aa6.62□□□□□ -1.35
SMARCA2-209ENST00000382203 APCP25054 2843 aa6.62□□□□□ -1.35
SMARCA2-209ENST00000382203 TEP1Q99973 2627 aaKnown RBP6.62□□□□□ -1.35
SMARCA2-209ENST00000382203 ITPR2Q14571 2701 aa6.62□□□□□ -1.35
SMARCA2-209ENST00000382203 UBR5O95071 2799 aaPredicted RBP6.6□□□□□ -1.35
SMARCA2-209ENST00000382203 KRTAP13-1Q8IUC0 172 aa6.6□□□□□ -1.35
SMARCA2-209ENST00000382203 MXRA5Q9NR99 2828 aa6.59□□□□□ -1.36
SMARCA2-209ENST00000382203 FBN2P35556 2912 aa6.57□□□□□ -1.36
SMARCA2-209ENST00000382203 NF1P21359 2839 aa6.57□□□□□ -1.36
SMARCA2-209ENST00000382203 KRTAP7-1Q8IUC3 87 aa6.56□□□□□ -1.36
SMARCA2-209ENST00000382203 SETXQ7Z333 2677 aaKnown RBP6.56□□□□□ -1.36
SMARCA2-209ENST00000382203 GCN1Q92616 2671 aaKnown RBP6.56□□□□□ -1.36
SMARCA2-209ENST00000382203 COL6A5A8TX70 2615 aa6.5□□□□□ -1.37
SMARCA2-209ENST00000382203 NBEAL2Q6ZNJ1 2754 aa6.47□□□□□ -1.37
SMARCA2-209ENST00000382203 A0A1B0GVY2 172 aa6.46□□□□□ -1.38
SMARCA2-209ENST00000382203 CSMD2Q7Z408 3487 aa6.45□□□□□ -1.38
SMARCA2-209ENST00000382203 PRO2289Q9P1D8 64 aa6.44□□□□□ -1.38
SMARCA2-209ENST00000382203 TENM4Q6N022 2769 aa6.42□□□□□ -1.38
SMARCA2-209ENST00000382203 XP32Q5T750 250 aa6.41□□□□□ -1.38
SMARCA2-209ENST00000382203 INE1O15225 51 aa6.4□□□□□ -1.38
SMARCA2-209ENST00000382203 KRTAP12-2P59991 146 aa6.4□□□□□ -1.38
SMARCA2-209ENST00000382203 KRTAP21-3Q3LHN1 58 aa6.39□□□□□ -1.39
SMARCA2-209ENST00000382203 VPS13CQ709C8 3753 aa6.38□□□□□ -1.39
SMARCA2-209ENST00000382203 HIVEP1P15822 2718 aa6.37□□□□□ -1.39
SMARCA2-209ENST00000382203 KRTAP10-10P60014 251 aa6.36□□□□□ -1.39
SMARCA2-209ENST00000382203 KMT2BQ9UMN6 2715 aaPredicted RBP6.35□□□□□ -1.39
SMARCA2-209ENST00000382203 NIPBLQ6KC79 2804 aaeCLIP6.35□□□□□ -1.39
SMARCA2-209ENST00000382203 TPRXLQ17RH7 258 aa6.32□□□□□ -1.4
SMARCA2-209ENST00000382203 PDZD2O15018 2839 aa6.31□□□□□ -1.4
SMARCA2-209ENST00000382203 CUBNO60494 3623 aa6.31□□□□□ -1.4
SMARCA2-209ENST00000382203 ZFHX3Q15911 3703 aa6.27□□□□□ -1.41
SMARCA2-209ENST00000382203 NBPF19A0A087WUL8 3843 aa6.26□□□□□ -1.41
SMARCA2-209ENST00000382203 KRTAP1-4P0C5Y4 121 aa6.25□□□□□ -1.41
SMARCA2-209ENST00000382203 KRTAP13-4Q3LI77 160 aa6.25□□□□□ -1.41
SMARCA2-209ENST00000382203 OTOGQ6ZRI0 2925 aa6.24□□□□□ -1.41
SMARCA2-209ENST00000382203 TENM1Q9UKZ4 2725 aa6.23□□□□□ -1.41
SMARCA2-209ENST00000382203 VWFP04275 2813 aa6.22□□□□□ -1.41
SMARCA2-209ENST00000382203 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
SMARCA2-209ENST00000382203 ZNF469Q96JG9 3925 aaPredicted RBP6.16□□□□□ -1.42
SMARCA2-209ENST00000382203 KRTAP13-3Q3SY46 172 aa6.13□□□□□ -1.43
SMARCA2-209ENST00000382203 ANK3Q12955 4377 aaKnown RBP6.11□□□□□ -1.43
SMARCA2-209ENST00000382203 KRTAP12-1P59990 96 aa6.1□□□□□ -1.43
SMARCA2-209ENST00000382203 TENM3Q9P273 2699 aa6.05□□□□□ -1.44
SMARCA2-209ENST00000382203 FBN1P35555 2871 aaKnown RBP6.01□□□□□ -1.45
SMARCA2-209ENST00000382203 TRRAPQ9Y4A5 3859 aa6□□□□□ -1.45
SMARCA2-209ENST00000382203 AKAP9Q99996 3911 aa5.99□□□□□ -1.45
SMARCA2-209ENST00000382203 PKD1L1Q8TDX9 2849 aa5.96□□□□□ -1.45
SMARCA2-209ENST00000382203 KRTAP23-1A1A580 65 aa5.94□□□□□ -1.46
SMARCA2-209ENST00000382203 TGP01266 2768 aa5.8□□□□□ -1.48
SMARCA2-209ENST00000382203 TENM2Q9NT68 2774 aa5.76□□□□□ -1.49
SMARCA2-209ENST00000382203 CRCT1Q9UGL9 99 aa5.75□□□□□ -1.49
SMARCA2-209ENST00000382203 KRTAP10-6P60371 365 aaPredicted RBP5.67□□□□□ -1.5
SMARCA2-209ENST00000382203 KRTAP3-1Q9BYR8 98 aa5.66□□□□□ -1.5
SMARCA2-209ENST00000382203 HUWE1Q7Z6Z7 4374 aaKnown RBP5.55□□□□□ -1.52
SMARCA2-209ENST00000382203 KRTAP10-12P60413 245 aa5.54□□□□□ -1.52
SMARCA2-209ENST00000382203 KRTAP10-5P60370 271 aa5.53□□□□□ -1.52
SMARCA2-209ENST00000382203 SRRM2Q9UQ35 2752 aaKnown RBP5.52□□□□□ -1.53
SMARCA2-209ENST00000382203 COL7A1Q02388 2944 aa5.5□□□□□ -1.53
SMARCA2-209ENST00000382203 ANK2Q01484 3957 aa5.49□□□□□ -1.53
SMARCA2-209ENST00000382203 KRTAP12-3P60328 96 aa5.49□□□□□ -1.53
SMARCA2-209ENST00000382203 FBN3Q75N90 2809 aa5.45□□□□□ -1.54
SMARCA2-209ENST00000382203 MEGF8Q7Z7M0 2845 aa5.44□□□□□ -1.54
SMARCA2-209ENST00000382203 CSMD3Q7Z407 3707 aa5.44□□□□□ -1.54
SMARCA2-209ENST00000382203 DNAH9Q9NYC9 4486 aa5.43□□□□□ -1.54
SMARCA2-209ENST00000382203 CMYA5Q8N3K9 4069 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms