RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 ZNF861PO60384 105 aa9.03□□□□□ -0.96
VLDLR-202ENST00000382099 Q96NJ1 140 aa9□□□□□ -0.97
VLDLR-202ENST00000382099 CHTF8P0CG12 524 aa8.98□□□□□ -0.97
VLDLR-202ENST00000382099 KRTAP11-1Q8IUC1 163 aa8.97□□□□□ -0.97
VLDLR-202ENST00000382099 CRIPTQ9P021 101 aa8.97□□□□□ -0.97
VLDLR-202ENST00000382099 DNAH10Q8IVF4 4471 aa8.96□□□□□ -0.98
VLDLR-202ENST00000382099 KRTAP24-1Q3LI83 254 aa8.95□□□□□ -0.98
VLDLR-202ENST00000382099 DMAC1Q96GE9 116 aa8.95□□□□□ -0.98
VLDLR-202ENST00000382099 KRTAP25-1Q3LHN0 102 aa8.95□□□□□ -0.98
VLDLR-202ENST00000382099 SPINK1P00995 79 aa8.94□□□□□ -0.98
VLDLR-202ENST00000382099 H3BNG1 76 aa8.94□□□□□ -0.98
VLDLR-202ENST00000382099 SPRR1BP22528 89 aa8.93□□□□□ -0.98
VLDLR-202ENST00000382099 DNAH1Q9P2D7 4330 aa8.92□□□□□ -0.98
VLDLR-202ENST00000382099 CMYA5Q8N3K9 4069 aa8.92□□□□□ -0.98
VLDLR-202ENST00000382099 DNAH10OSP0CZ25 163 aa8.92□□□□□ -0.98
VLDLR-202ENST00000382099 TGP01266 2768 aa8.88□□□□□ -0.99
VLDLR-202ENST00000382099 ANAPC11Q9NYG5 84 aa8.85□□□□□ -0.99
VLDLR-202ENST00000382099 A8MUU9 505 aa8.83□□□□□ -1
VLDLR-202ENST00000382099 IGLV7-43P04211 117 aa8.83□□□□□ -1
VLDLR-202ENST00000382099 IGLV5-52A0A0A0MRZ9 124 aa8.82□□□□□ -1
VLDLR-202ENST00000382099 P0C880 135 aa8.82□□□□□ -1
VLDLR-202ENST00000382099 IGKV2D-30A0A075B6S6 120 aa8.8□□□□□ -1
VLDLR-202ENST00000382099 IGKV2-30P06310 120 aa8.8□□□□□ -1
VLDLR-202ENST00000382099 SSBP3-AS1Q7Z2R9 100 aa8.8□□□□□ -1
VLDLR-202ENST00000382099 DNAH3Q8TD57 4116 aa8.8□□□□□ -1
VLDLR-202ENST00000382099 LINC00304Q8N9R0 145 aa8.78□□□□□ -1
VLDLR-202ENST00000382099 KRTAP13-3Q3SY46 172 aa8.77□□□□□ -1.01
VLDLR-202ENST00000382099 SPINT4Q6UDR6 99 aa8.75□□□□□ -1.01
VLDLR-202ENST00000382099 DNAH7Q8WXX0 4024 aa8.73□□□□□ -1.01
VLDLR-202ENST00000382099 ALMS1Q8TCU4 4167 aa8.72□□□□□ -1.01
VLDLR-202ENST00000382099 A0A0A0MQY5 61 aa8.72□□□□□ -1.01
VLDLR-202ENST00000382099 FAM229AH3BQW9 127 aa8.72□□□□□ -1.01
VLDLR-202ENST00000382099 HUWE1Q7Z6Z7 4374 aaKnown RBP8.72□□□□□ -1.01
VLDLR-202ENST00000382099 KRTAP1-5Q9BYS1 174 aa8.71□□□□□ -1.02
VLDLR-202ENST00000382099 LINC00483Q53H64 154 aa8.71□□□□□ -1.02
VLDLR-202ENST00000382099 CIRBP-AS1Q8TBR5 109 aa8.71□□□□□ -1.02
VLDLR-202ENST00000382099 C14orf177Q52M58 125 aa8.69□□□□□ -1.02
VLDLR-202ENST00000382099 UBE2DNLQ8IWF7 75 aa8.69□□□□□ -1.02
VLDLR-202ENST00000382099 DNAH9Q9NYC9 4486 aa8.69□□□□□ -1.02
VLDLR-202ENST00000382099 NDUFAF8A1L188 74 aa8.67□□□□□ -1.02
VLDLR-202ENST00000382099 H0YAA0 97 aa8.66□□□□□ -1.02
VLDLR-202ENST00000382099 Q8N1X5 172 aa8.64□□□□□ -1.03
VLDLR-202ENST00000382099 WWC2-AS2Q96NR7 200 aa8.64□□□□□ -1.03
VLDLR-202ENST00000382099 PANO1I0J062 215 aa8.63□□□□□ -1.03
VLDLR-202ENST00000382099 Q6ZSA8 131 aa8.63□□□□□ -1.03
VLDLR-202ENST00000382099 LY6G6CO95867 125 aa8.62□□□□□ -1.03
VLDLR-202ENST00000382099 KRTAP13-1Q8IUC0 172 aa8.61□□□□□ -1.03
VLDLR-202ENST00000382099 K7ERS5 55 aa8.6□□□□□ -1.03
VLDLR-202ENST00000382099 FBN3Q75N90 2809 aa8.59□□□□□ -1.03
VLDLR-202ENST00000382099 DMBT1Q9UGM3 2413 aaPredicted RBP8.58□□□□□ -1.04
VLDLR-202ENST00000382099 PSORS1C2Q9UIG4 136 aa8.58□□□□□ -1.04
VLDLR-202ENST00000382099 PLECQ15149 4684 aaKnown RBP8.57□□□□□ -1.04
VLDLR-202ENST00000382099 A0A1B0GU33 70 aa8.57□□□□□ -1.04
VLDLR-202ENST00000382099 KRTAP16-1A8MUX0 517 aa8.52□□□□□ -1.05
VLDLR-202ENST00000382099 TYMSOSQ8TAI1 123 aa8.52□□□□□ -1.05
VLDLR-202ENST00000382099 C20orf166-AS1Q96NR2 134 aa8.51□□□□□ -1.05
VLDLR-202ENST00000382099 MEGF8Q7Z7M0 2845 aa8.51□□□□□ -1.05
VLDLR-202ENST00000382099 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.5□□□□□ -1.05
VLDLR-202ENST00000382099 FRAS1Q86XX4 4008 aa8.48□□□□□ -1.05
VLDLR-202ENST00000382099 KMT2AQ03164 3969 aa8.47□□□□□ -1.05
VLDLR-202ENST00000382099 PRKDCP78527 4128 aaKnown RBP8.46□□□□□ -1.05
VLDLR-202ENST00000382099 DNHD1Q96M86 4753 aa8.45□□□□□ -1.06
VLDLR-202ENST00000382099 NUPR2A6NF83 97 aa8.44□□□□□ -1.06
VLDLR-202ENST00000382099 STARD9Q9P2P6 4700 aa8.44□□□□□ -1.06
VLDLR-202ENST00000382099 H1FX-AS1Q4G0G2 97 aa8.43□□□□□ -1.06
VLDLR-202ENST00000382099 A0A087WTM6 91 aa8.42□□□□□ -1.06
VLDLR-202ENST00000382099 DYNC2H1Q8NCM8 4307 aaKnown RBP8.42□□□□□ -1.06
VLDLR-202ENST00000382099 C10orf95Q9H7T3 257 aa8.37□□□□□ -1.07
VLDLR-202ENST00000382099 SPACA4Q8TDM5 124 aa8.35□□□□□ -1.07
VLDLR-202ENST00000382099 APLNQ9ULZ1 77 aa8.35□□□□□ -1.07
VLDLR-202ENST00000382099 HECTD4Q9Y4D8 3996 aa8.32□□□□□ -1.08
VLDLR-202ENST00000382099 TPRXLQ17RH7 258 aa8.32□□□□□ -1.08
VLDLR-202ENST00000382099 DNAH8Q96JB1 4490 aa8.32□□□□□ -1.08
VLDLR-202ENST00000382099 A0A0D9SG42 100 aa8.31□□□□□ -1.08
VLDLR-202ENST00000382099 NBDYA0A0U1RRE5 68 aa8.3□□□□□ -1.08
VLDLR-202ENST00000382099 Q6ZRN7 208 aaPredicted RBP8.26□□□□□ -1.09
VLDLR-202ENST00000382099 DNAH6Q9C0G6 4158 aa8.26□□□□□ -1.09
VLDLR-202ENST00000382099 KRTAP15-1Q3LI76 137 aa8.26□□□□□ -1.09
VLDLR-202ENST00000382099 COX6B2Q6YFQ2 88 aa8.25□□□□□ -1.09
VLDLR-202ENST00000382099 DNAH2Q9P225 4427 aa8.24□□□□□ -1.09
VLDLR-202ENST00000382099 VPS13DQ5THJ4 4388 aa8.23□□□□□ -1.09
VLDLR-202ENST00000382099 DNAH11Q96DT5 4516 aa8.21□□□□□ -1.09
VLDLR-202ENST00000382099 LUZP6Q538Z0 58 aa8.21□□□□□ -1.1
VLDLR-202ENST00000382099 DNAH17Q9UFH2 4485 aa8.2□□□□□ -1.1
VLDLR-202ENST00000382099 RPL37P61927 97 aaKnown RBP8.19□□□□□ -1.1
VLDLR-202ENST00000382099 HYDINQ4G0P3 5121 aa8.09□□□□□ -1.11
VLDLR-202ENST00000382099 KRTAP10-2P60368 255 aa8.08□□□□□ -1.12
VLDLR-202ENST00000382099 KRTAP13-2Q52LG2 175 aa8.08□□□□□ -1.12
VLDLR-202ENST00000382099 KRTAP21-3Q3LHN1 58 aa8.07□□□□□ -1.12
VLDLR-202ENST00000382099 LRP1BQ9NZR2 4599 aa8.05□□□□□ -1.12
VLDLR-202ENST00000382099 KRTAP3-1Q9BYR8 98 aa8.05□□□□□ -1.12
VLDLR-202ENST00000382099 C9orf92A6NGG3 77 aa8.01□□□□□ -1.13
VLDLR-202ENST00000382099 DNAH5Q8TE73 4624 aa7.97□□□□□ -1.13
VLDLR-202ENST00000382099 KRTAP13-4Q3LI77 160 aa7.97□□□□□ -1.13
VLDLR-202ENST00000382099 FAT2Q9NYQ8 4349 aa7.96□□□□□ -1.14
VLDLR-202ENST00000382099 SMR3BP02814 79 aaPredicted RBP7.95□□□□□ -1.14
VLDLR-202ENST00000382099 PKHD1P08F94 4074 aa7.95□□□□□ -1.14
VLDLR-202ENST00000382099 KRTAP10-1P60331 282 aa7.91□□□□□ -1.14
VLDLR-202ENST00000382099 FAT1Q14517 4588 aa7.9□□□□□ -1.15
VLDLR-202ENST00000382099 S4R3F8 94 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms