RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 WDFY4Q6ZS81 3184 aa8.42□□□□□ -1.06
SNAPC3-202ENST00000380821 KALRNO60229 2985 aa8.4□□□□□ -1.06
SNAPC3-202ENST00000380821 KRTAP12-1P59990 96 aa8.4□□□□□ -1.06
SNAPC3-202ENST00000380821 ITPR1Q14643 2758 aa8.38□□□□□ -1.07
SNAPC3-202ENST00000380821 DSPP15924 2871 aaKnown RBP8.37□□□□□ -1.07
SNAPC3-202ENST00000380821 UTP20O75691 2785 aaKnown RBP8.3□□□□□ -1.08
SNAPC3-202ENST00000380821 PRUNE2Q8WUY3 3088 aa8.3□□□□□ -1.08
SNAPC3-202ENST00000380821 KRTAP3-1Q9BYR8 98 aa8.27□□□□□ -1.09
SNAPC3-202ENST00000380821 LRBAP50851 2863 aa8.26□□□□□ -1.09
SNAPC3-202ENST00000380821 CDH23Q9H251 3354 aa8.26□□□□□ -1.09
SNAPC3-202ENST00000380821 LAMA1P25391 3075 aa8.24□□□□□ -1.09
SNAPC3-202ENST00000380821 VPS13AQ96RL7 3174 aa8.24□□□□□ -1.09
SNAPC3-202ENST00000380821 KRTAP15-1Q3LI76 137 aa8.23□□□□□ -1.09
SNAPC3-202ENST00000380821 INE1O15225 51 aa8.22□□□□□ -1.09
SNAPC3-202ENST00000380821 HIVEP1P15822 2718 aa8.2□□□□□ -1.1
SNAPC3-202ENST00000380821 CELSR3Q9NYQ7 3312 aa8.14□□□□□ -1.11
SNAPC3-202ENST00000380821 XIRP2A4UGR9 3374 aa8.13□□□□□ -1.11
SNAPC3-202ENST00000380821 FREM2Q5SZK8 3169 aa8.12□□□□□ -1.11
SNAPC3-202ENST00000380821 ZZEF1O43149 2961 aa8.11□□□□□ -1.11
SNAPC3-202ENST00000380821 ATMQ13315 3056 aa8.11□□□□□ -1.11
SNAPC3-202ENST00000380821 SZT2Q5T011 3432 aa8.1□□□□□ -1.11
SNAPC3-202ENST00000380821 KRTAP10-6P60371 365 aaPredicted RBP8.09□□□□□ -1.11
SNAPC3-202ENST00000380821 NIPBLQ6KC79 2804 aaeCLIP8.09□□□□□ -1.11
SNAPC3-202ENST00000380821 TNRC18O15417 2968 aaPredicted RBP8.09□□□□□ -1.11
SNAPC3-202ENST00000380821 COL6A3P12111 3177 aa8.05□□□□□ -1.12
SNAPC3-202ENST00000380821 NBEAQ8NFP9 2946 aa8.04□□□□□ -1.12
SNAPC3-202ENST00000380821 DNAH14Q0VDD8 3507 aa8.04□□□□□ -1.12
SNAPC3-202ENST00000380821 ASH1LQ9NR48 2969 aaKnown RBP8.04□□□□□ -1.12
SNAPC3-202ENST00000380821 ADGRG4Q8IZF6 3080 aa8.03□□□□□ -1.12
SNAPC3-202ENST00000380821 FLNCQ14315 2725 aa8.01□□□□□ -1.13
SNAPC3-202ENST00000380821 TACC2O95359 2948 aa8.01□□□□□ -1.13
SNAPC3-202ENST00000380821 SPTBN5Q9NRC6 3674 aaKnown RBP7.98□□□□□ -1.13
SNAPC3-202ENST00000380821 TGP01266 2768 aa7.98□□□□□ -1.13
SNAPC3-202ENST00000380821 COL12A1Q99715 3063 aa7.98□□□□□ -1.13
SNAPC3-202ENST00000380821 HRNRQ86YZ3 2850 aaPredicted RBP7.97□□□□□ -1.13
SNAPC3-202ENST00000380821 VCANP13611 3396 aa7.95□□□□□ -1.14
SNAPC3-202ENST00000380821 EYSQ5T1H1 3165 aa7.94□□□□□ -1.14
SNAPC3-202ENST00000380821 DMXL2Q8TDJ6 3036 aa7.92□□□□□ -1.14
SNAPC3-202ENST00000380821 SPEGQ15772 3267 aa7.9□□□□□ -1.15
SNAPC3-202ENST00000380821 USP34Q70CQ2 3546 aa7.87□□□□□ -1.15
SNAPC3-202ENST00000380821 BOD1L1Q8NFC6 3051 aa7.87□□□□□ -1.15
SNAPC3-202ENST00000380821 CELSR2Q9HCU4 2923 aa7.86□□□□□ -1.15
SNAPC3-202ENST00000380821 TENM4Q6N022 2769 aa7.83□□□□□ -1.16
SNAPC3-202ENST00000380821 CRYBG3Q68DQ2 2970 aa7.81□□□□□ -1.16
SNAPC3-202ENST00000380821 DCHS2Q6V1P9 2916 aa7.81□□□□□ -1.16
SNAPC3-202ENST00000380821 FRYLO94915 3013 aa7.81□□□□□ -1.16
SNAPC3-202ENST00000380821 KRTAP3-2Q9BYR7 98 aa7.79□□□□□ -1.16
SNAPC3-202ENST00000380821 MYO15AQ9UKN7 3530 aa7.75□□□□□ -1.17
SNAPC3-202ENST00000380821 KRTAP3-3Q9BYR6 98 aa7.74□□□□□ -1.17
SNAPC3-202ENST00000380821 CFAP47Q6ZTR5 3102 aa7.74□□□□□ -1.17
SNAPC3-202ENST00000380821 REV3LO60673 3130 aa7.71□□□□□ -1.18
SNAPC3-202ENST00000380821 ZANQ9Y493 2812 aa7.7□□□□□ -1.18
SNAPC3-202ENST00000380821 TENM2Q9NT68 2774 aa7.64□□□□□ -1.19
SNAPC3-202ENST00000380821 KRTAP23-1A1A580 65 aa7.63□□□□□ -1.19
SNAPC3-202ENST00000380821 KRTAP10-12P60413 245 aa7.63□□□□□ -1.19
SNAPC3-202ENST00000380821 NF1P21359 2839 aa7.62□□□□□ -1.19
SNAPC3-202ENST00000380821 DMXL1Q9Y485 3027 aa7.61□□□□□ -1.19
SNAPC3-202ENST00000380821 FBN2P35556 2912 aa7.59□□□□□ -1.19
SNAPC3-202ENST00000380821 CELSR1Q9NYQ6 3014 aa7.59□□□□□ -1.19
SNAPC3-202ENST00000380821 TENM1Q9UKZ4 2725 aa7.59□□□□□ -1.19
SNAPC3-202ENST00000380821 MT1HL1P0DM35 61 aa7.55□□□□□ -1.2
SNAPC3-202ENST00000380821 TENM3Q9P273 2699 aa7.54□□□□□ -1.2
SNAPC3-202ENST00000380821 KRTAP12-3P60328 96 aa7.44□□□□□ -1.22
SNAPC3-202ENST00000380821 ANK3Q12955 4377 aaKnown RBP7.43□□□□□ -1.22
SNAPC3-202ENST00000380821 WDFY3Q8IZQ1 3526 aa7.41□□□□□ -1.22
SNAPC3-202ENST00000380821 MXRA5Q9NR99 2828 aa7.4□□□□□ -1.22
SNAPC3-202ENST00000380821 KRTAP10-4P60372 401 aaPredicted RBP7.38□□□□□ -1.23
SNAPC3-202ENST00000380821 LCE3AQ5TA76 89 aa7.37□□□□□ -1.23
SNAPC3-202ENST00000380821 CRCT1Q9UGL9 99 aa7.33□□□□□ -1.24
SNAPC3-202ENST00000380821 PDZD2O15018 2839 aa7.32□□□□□ -1.24
SNAPC3-202ENST00000380821 NBPF19A0A087WUL8 3843 aa7.29□□□□□ -1.24
SNAPC3-202ENST00000380821 LOC400499M0QZD8 3231 aa7.29□□□□□ -1.24
SNAPC3-202ENST00000380821 ALMS1Q8TCU4 4167 aa7.26□□□□□ -1.25
SNAPC3-202ENST00000380821 ASPMQ8IZT6 3477 aa7.24□□□□□ -1.25
SNAPC3-202ENST00000380821 DMDP11532 3685 aa7.23□□□□□ -1.25
SNAPC3-202ENST00000380821 MUC3AQ02505 3323 aa7.22□□□□□ -1.25
SNAPC3-202ENST00000380821 HUWE1Q7Z6Z7 4374 aaKnown RBP7.18□□□□□ -1.26
SNAPC3-202ENST00000380821 LORP23490 312 aaPredicted RBP7.18□□□□□ -1.26
SNAPC3-202ENST00000380821 RELNP78509 3460 aa7.13□□□□□ -1.27
SNAPC3-202ENST00000380821 DCHS1Q96JQ0 3298 aa7.13□□□□□ -1.27
SNAPC3-202ENST00000380821 ZFHX4Q86UP3 3567 aa7.12□□□□□ -1.27
SNAPC3-202ENST00000380821 PKD1L1Q8TDX9 2849 aa7.08□□□□□ -1.28
SNAPC3-202ENST00000380821 SRRM2Q9UQ35 2752 aaKnown RBP7.05□□□□□ -1.28
SNAPC3-202ENST00000380821 CSMD1Q96PZ7 3565 aa7.05□□□□□ -1.28
SNAPC3-202ENST00000380821 KRTAP4-5Q9BYR2 181 aa7.05□□□□□ -1.28
SNAPC3-202ENST00000380821 LAMA5O15230 3695 aa7.04□□□□□ -1.28
SNAPC3-202ENST00000380821 OTOGQ6ZRI0 2925 aa7.02□□□□□ -1.28
SNAPC3-202ENST00000380821 MEGF8Q7Z7M0 2845 aa7.02□□□□□ -1.29
SNAPC3-202ENST00000380821 FBN3Q75N90 2809 aa7□□□□□ -1.29
SNAPC3-202ENST00000380821 VWFP04275 2813 aa7□□□□□ -1.29
SNAPC3-202ENST00000380821 KRTAP10-5P60370 271 aa6.96□□□□□ -1.3
SNAPC3-202ENST00000380821 SMG1Q96Q15 3661 aaKnown RBP6.94□□□□□ -1.3
SNAPC3-202ENST00000380821 FBN1P35555 2871 aaKnown RBP6.91□□□□□ -1.3
SNAPC3-202ENST00000380821 DNAH2Q9P225 4427 aa6.9□□□□□ -1.3
SNAPC3-202ENST00000380821 KRTAP8-1Q8IUC2 63 aa6.87□□□□□ -1.31
SNAPC3-202ENST00000380821 ZFHX3Q15911 3703 aa6.84□□□□□ -1.31
SNAPC3-202ENST00000380821 SPENQ96T58 3664 aaKnown RBP6.79□□□□□ -1.32
SNAPC3-202ENST00000380821 CUBNO60494 3623 aa6.75□□□□□ -1.33
SNAPC3-202ENST00000380821 SVEP1Q4LDE5 3571 aa6.74□□□□□ -1.33
SNAPC3-202ENST00000380821 TRRAPQ9Y4A5 3859 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms