RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 ZNF706Q9Y5V0 76 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-204ENST00000380176 ANAPC11Q9NYG5 84 aa4.82□□□□□ -1.64
PDLIM5-204ENST00000380176 MP68P56378 58 aa4.81□□□□□ -1.64
PDLIM5-204ENST00000380176 HCG22E2RYF7 251 aa4.81□□□□□ -1.64
PDLIM5-204ENST00000380176 LINC00472Q9H8W2 130 aa4.81□□□□□ -1.64
PDLIM5-204ENST00000380176 WFDC13Q8IUB5 93 aa4.8□□□□□ -1.64
PDLIM5-204ENST00000380176 PKD1P98161 4303 aa4.8□□□□□ -1.64
PDLIM5-204ENST00000380176 FAT2Q9NYQ8 4349 aa4.8□□□□□ -1.64
PDLIM5-204ENST00000380176 LINC00483Q53H64 154 aa4.8□□□□□ -1.64
PDLIM5-204ENST00000380176 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
PDLIM5-204ENST00000380176 KRTAP10-2P60368 255 aa4.79□□□□□ -1.64
PDLIM5-204ENST00000380176 ZNF861PO60384 105 aa4.78□□□□□ -1.64
PDLIM5-204ENST00000380176 LCE6AA0A183 80 aa4.78□□□□□ -1.64
PDLIM5-204ENST00000380176 LINC01554Q52M75 96 aa4.78□□□□□ -1.64
PDLIM5-204ENST00000380176 KRTAP29-1A8MX34 341 aaPredicted RBP4.77□□□□□ -1.65
PDLIM5-204ENST00000380176 MOBPQ13875 183 aa4.77□□□□□ -1.65
PDLIM5-204ENST00000380176 Q96NJ1 140 aa4.76□□□□□ -1.65
PDLIM5-204ENST00000380176 LRP1BQ9NZR2 4599 aa4.76□□□□□ -1.65
PDLIM5-204ENST00000380176 A8MWP4 228 aa4.76□□□□□ -1.65
PDLIM5-204ENST00000380176 CIRBP-AS1Q8TBR5 109 aa4.76□□□□□ -1.65
PDLIM5-204ENST00000380176 IGLV7-43P04211 117 aa4.75□□□□□ -1.65
PDLIM5-204ENST00000380176 CASC2Q6XLA1 102 aa4.74□□□□□ -1.65
PDLIM5-204ENST00000380176 hDV103S1A0JD37 113 aa4.74□□□□□ -1.65
PDLIM5-204ENST00000380176 ZCCHC13Q8WW36 166 aaKnown RBP4.74□□□□□ -1.65
PDLIM5-204ENST00000380176 TRAV22A0A0B4J277 110 aa4.73□□□□□ -1.65
PDLIM5-204ENST00000380176 KRTAP10-1P60331 282 aa4.72□□□□□ -1.65
PDLIM5-204ENST00000380176 MMP24-AS1A0A0U1RRL7 71 aa4.72□□□□□ -1.65
PDLIM5-204ENST00000380176 PSPHP1O15172 72 aa4.71□□□□□ -1.66
PDLIM5-204ENST00000380176 VPS13BQ7Z7G8 4022 aa4.7□□□□□ -1.66
PDLIM5-204ENST00000380176 PKHD1P08F94 4074 aa4.7□□□□□ -1.66
PDLIM5-204ENST00000380176 CYP4F30PQ9H0H9 118 aa4.7□□□□□ -1.66
PDLIM5-204ENST00000380176 SACSQ9NZJ4 4579 aa4.7□□□□□ -1.66
PDLIM5-204ENST00000380176 NDUFB1O75438 58 aa4.69□□□□□ -1.66
PDLIM5-204ENST00000380176 Q6ZSA8 131 aa4.69□□□□□ -1.66
PDLIM5-204ENST00000380176 IGHV6-1A0A0B4J1U7 121 aa4.69□□□□□ -1.66
PDLIM5-204ENST00000380176 A8MU10 97 aa4.69□□□□□ -1.66
PDLIM5-204ENST00000380176 KRTAP21-3Q3LHN1 58 aa4.69□□□□□ -1.66
PDLIM5-204ENST00000380176 Q5VV11 94 aa4.69□□□□□ -1.66
PDLIM5-204ENST00000380176 LINC00208Q96KT6 92 aa4.69□□□□□ -1.66
PDLIM5-204ENST00000380176 A0A087X002 238 aa4.68□□□□□ -1.66
PDLIM5-204ENST00000380176 NOTCH2NLQ7Z3S9 236 aa4.68□□□□□ -1.66
PDLIM5-204ENST00000380176 ASB16-AS1Q495Z4 193 aa4.68□□□□□ -1.66
PDLIM5-204ENST00000380176 H0Y9P7 68 aa4.67□□□□□ -1.66
PDLIM5-204ENST00000380176 C8orf17Q9NRJ1 99 aa4.67□□□□□ -1.66
PDLIM5-204ENST00000380176 A0A1B0GVX0 72 aa4.66□□□□□ -1.66
PDLIM5-204ENST00000380176 PRR4Q16378 134 aa4.66□□□□□ -1.66
PDLIM5-204ENST00000380176 SPINK6Q6UWN8 80 aa4.66□□□□□ -1.66
PDLIM5-204ENST00000380176 SPTSSBQ8NFR3 76 aa4.66□□□□□ -1.66
PDLIM5-204ENST00000380176 KRTAP13-2Q52LG2 175 aa4.65□□□□□ -1.67
PDLIM5-204ENST00000380176 CDC42SE1Q9NRR8 79 aa4.64□□□□□ -1.67
PDLIM5-204ENST00000380176 C1orf64Q8NEQ6 169 aa4.64□□□□□ -1.67
PDLIM5-204ENST00000380176 LIMD2Q9BT23 127 aa4.64□□□□□ -1.67
PDLIM5-204ENST00000380176 SSBP3-AS1Q7Z2R9 100 aa4.63□□□□□ -1.67
PDLIM5-204ENST00000380176 KRTAP1-4P0C5Y4 121 aa4.61□□□□□ -1.67
PDLIM5-204ENST00000380176 H3BPC8 53 aa4.61□□□□□ -1.67
PDLIM5-204ENST00000380176 CHKB-CPT1BH3BT56 60 aa4.61□□□□□ -1.67
PDLIM5-204ENST00000380176 MRPL34Q9BQ48 92 aaKnown RBP4.61□□□□□ -1.67
PDLIM5-204ENST00000380176 TP53AIP1Q9HCN2 124 aa4.6□□□□□ -1.67
PDLIM5-204ENST00000380176 DYNC1H1Q14204 4646 aaKnown RBP4.59□□□□□ -1.67
PDLIM5-204ENST00000380176 PCOTHQ58A44 107 aa4.58□□□□□ -1.68
PDLIM5-204ENST00000380176 LOC101927531A0A1B0GV80 90 aa4.57□□□□□ -1.68
PDLIM5-204ENST00000380176 Q5W150 140 aa4.57□□□□□ -1.68
PDLIM5-204ENST00000380176 SPANXA2-OT1Q8N9U9 137 aa4.57□□□□□ -1.68
PDLIM5-204ENST00000380176 FAT1Q14517 4588 aa4.57□□□□□ -1.68
PDLIM5-204ENST00000380176 APOBP04114 4563 aaKnown RBP4.55□□□□□ -1.68
PDLIM5-204ENST00000380176 SMR3BP02814 79 aaPredicted RBP4.55□□□□□ -1.68
PDLIM5-204ENST00000380176 KRTAP13-3Q3SY46 172 aa4.54□□□□□ -1.68
PDLIM5-204ENST00000380176 KMT2CQ8NEZ4 4911 aaKnown RBP4.54□□□□□ -1.68
PDLIM5-204ENST00000380176 RETNLBQ9BQ08 111 aa4.54□□□□□ -1.68
PDLIM5-204ENST00000380176 KRTAP3-1Q9BYR8 98 aa4.54□□□□□ -1.68
PDLIM5-204ENST00000380176 IGLV7-46A0A075B6I9 117 aa4.54□□□□□ -1.68
PDLIM5-204ENST00000380176 A6NED7 52 aa4.54□□□□□ -1.68
PDLIM5-204ENST00000380176 Q8N9P0 234 aaPredicted RBP4.54□□□□□ -1.68
PDLIM5-204ENST00000380176 TYMSOSQ8TAI1 123 aa4.53□□□□□ -1.68
PDLIM5-204ENST00000380176 A0A1B0GVY2 172 aa4.52□□□□□ -1.69
PDLIM5-204ENST00000380176 ADM2Q7Z4H4 148 aa4.52□□□□□ -1.69
PDLIM5-204ENST00000380176 RYR2Q92736 4967 aa4.52□□□□□ -1.69
PDLIM5-204ENST00000380176 XP32Q5T750 250 aa4.5□□□□□ -1.69
PDLIM5-204ENST00000380176 PRR15LQ9BU68 103 aa4.5□□□□□ -1.69
PDLIM5-204ENST00000380176 KRTAP16-1A8MUX0 517 aa4.5□□□□□ -1.69
PDLIM5-204ENST00000380176 COA5Q86WW8 74 aa4.49□□□□□ -1.69
PDLIM5-204ENST00000380176 SPINK1P00995 79 aa4.48□□□□□ -1.69
PDLIM5-204ENST00000380176 KRTAP10-4P60372 401 aaPredicted RBP4.48□□□□□ -1.69
PDLIM5-204ENST00000380176 PKHD1L1Q86WI1 4243 aa4.47□□□□□ -1.69
PDLIM5-204ENST00000380176 LINC00304Q8N9R0 145 aa4.46□□□□□ -1.7
PDLIM5-204ENST00000380176 HRES1P13985 223 aa4.46□□□□□ -1.7
PDLIM5-204ENST00000380176 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
PDLIM5-204ENST00000380176 KRTAP4-6Q9BYQ5 205 aa4.44□□□□□ -1.7
PDLIM5-204ENST00000380176 ROMO1P60602 79 aa4.44□□□□□ -1.7
PDLIM5-204ENST00000380176 IGKV2-30P06310 120 aa4.42□□□□□ -1.7
PDLIM5-204ENST00000380176 RPS29P62273 56 aaKnown RBP4.41□□□□□ -1.7
PDLIM5-204ENST00000380176 SPAG11AQ6PDA7 123 aa4.41□□□□□ -1.7
PDLIM5-204ENST00000380176 LINC01558Q9Y6Z2 57 aa4.4□□□□□ -1.7
PDLIM5-204ENST00000380176 LRP1Q07954 4544 aaKnown RBP4.4□□□□□ -1.7
PDLIM5-204ENST00000380176 RYR3Q15413 4870 aa4.4□□□□□ -1.7
PDLIM5-204ENST00000380176 IGKV2D-30A0A075B6S6 120 aa4.4□□□□□ -1.71
PDLIM5-204ENST00000380176 HSPG2P98160 4391 aa4.39□□□□□ -1.71
PDLIM5-204ENST00000380176 C9orf92A6NGG3 77 aa4.38□□□□□ -1.71
PDLIM5-204ENST00000380176 DMAC1Q96GE9 116 aa4.38□□□□□ -1.71
PDLIM5-204ENST00000380176 ACYP2P14621 99 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms