RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 M0R2T5 61 aa12.25□□□□□ -0.45
SKI-201ENST00000378536 S4R3F8 94 aa12.24□□□□□ -0.45
SKI-201ENST00000378536 PDZD2O15018 2839 aa12.23□□□□□ -0.45
SKI-201ENST00000378536 MXRA5Q9NR99 2828 aa12.23□□□□□ -0.45
SKI-201ENST00000378536 A0A0D9SG42 100 aa12.23□□□□□ -0.45
SKI-201ENST00000378536 KRTAP29-1A8MX34 341 aaPredicted RBP12.22□□□□□ -0.45
SKI-201ENST00000378536 KRTAP13-2Q52LG2 175 aa12.22□□□□□ -0.45
SKI-201ENST00000378536 Q1T7F1 81 aa12.21□□□□□ -0.46
SKI-201ENST00000378536 CSAG1Q6PB30 78 aa12.21□□□□□ -0.46
SKI-201ENST00000378536 CYSTM1Q9H1C7 97 aa12.21□□□□□ -0.46
SKI-201ENST00000378536 KTN1-AS1Q86SY8 53 aa12.17□□□□□ -0.46
SKI-201ENST00000378536 NOTCH2NLQ7Z3S9 236 aa12.14□□□□□ -0.47
SKI-201ENST00000378536 LCA10Q71F78 164 aa12.12□□□□□ -0.47
SKI-201ENST00000378536 A0A1B0GU33 70 aa12.12□□□□□ -0.47
SKI-201ENST00000378536 ZFHX4Q86UP3 3567 aa12.12□□□□□ -0.47
SKI-201ENST00000378536 Q5XG85 94 aa12.11□□□□□ -0.47
SKI-201ENST00000378536 CDC42SE1Q9NRR8 79 aa12.1□□□□□ -0.47
SKI-201ENST00000378536 LINC01558Q9Y6Z2 57 aa12.06□□□□□ -0.48
SKI-201ENST00000378536 DMAC1Q96GE9 116 aa12.03□□□□□ -0.48
SKI-201ENST00000378536 Q75L30 129 aa12□□□□□ -0.49
SKI-201ENST00000378536 NBPF19A0A087WUL8 3843 aa11.97□□□□□ -0.49
SKI-201ENST00000378536 DMBT1Q9UGM3 2413 aaPredicted RBP11.97□□□□□ -0.49
SKI-201ENST00000378536 OTOGQ6ZRI0 2925 aa11.95□□□□□ -0.5
SKI-201ENST00000378536 CELSR1Q9NYQ6 3014 aa11.93□□□□□ -0.5
SKI-201ENST00000378536 CAMK2N1Q7Z7J9 78 aa11.9□□□□□ -0.5
SKI-201ENST00000378536 R4GN34 69 aa11.84□□□□□ -0.51
SKI-201ENST00000378536 KRTAP1-4P0C5Y4 121 aa11.84□□□□□ -0.51
SKI-201ENST00000378536 TENM3Q9P273 2699 aa11.82□□□□□ -0.52
SKI-201ENST00000378536 RPL37P61927 97 aaKnown RBP11.81□□□□□ -0.52
SKI-201ENST00000378536 TENM1Q9UKZ4 2725 aa11.8□□□□□ -0.52
SKI-201ENST00000378536 Q5VV11 94 aa11.79□□□□□ -0.52
SKI-201ENST00000378536 SMG1Q96Q15 3661 aaKnown RBP11.77□□□□□ -0.52
SKI-201ENST00000378536 LUZP6Q538Z0 58 aa11.75□□□□□ -0.53
SKI-201ENST00000378536 TENM2Q9NT68 2774 aa11.73□□□□□ -0.53
SKI-201ENST00000378536 ANK3Q12955 4377 aaKnown RBP11.73□□□□□ -0.53
SKI-201ENST00000378536 H1FX-AS1Q4G0G2 97 aa11.73□□□□□ -0.53
SKI-201ENST00000378536 FLG2Q5D862 2391 aaPredicted RBP11.7□□□□□ -0.54
SKI-201ENST00000378536 ADM2Q7Z4H4 148 aa11.66□□□□□ -0.54
SKI-201ENST00000378536 A8MUU9 505 aa11.65□□□□□ -0.54
SKI-201ENST00000378536 M0QZ58 72 aa11.65□□□□□ -0.54
SKI-201ENST00000378536 BSNQ9UPA5 3926 aa11.64□□□□□ -0.55
SKI-201ENST00000378536 C20orf166-AS1Q96NR2 134 aa11.63□□□□□ -0.55
SKI-201ENST00000378536 SPENQ96T58 3664 aaKnown RBP11.62□□□□□ -0.55
SKI-201ENST00000378536 A0A1B0GVY2 172 aa11.61□□□□□ -0.55
SKI-201ENST00000378536 CSMD1Q96PZ7 3565 aa11.57□□□□□ -0.56
SKI-201ENST00000378536 ZFHX3Q15911 3703 aa11.55□□□□□ -0.56
SKI-201ENST00000378536 FBN1P35555 2871 aaKnown RBP11.53□□□□□ -0.56
SKI-201ENST00000378536 VWFP04275 2813 aa11.48□□□□□ -0.57
SKI-201ENST00000378536 XP32Q5T750 250 aa11.48□□□□□ -0.57
SKI-201ENST00000378536 SPATA8Q6RVD6 105 aa11.48□□□□□ -0.57
SKI-201ENST00000378536 PRAC1Q96KF2 57 aa11.48□□□□□ -0.57
SKI-201ENST00000378536 SVEP1Q4LDE5 3571 aa11.42□□□□□ -0.58
SKI-201ENST00000378536 CSMD2Q7Z408 3487 aa11.41□□□□□ -0.58
SKI-201ENST00000378536 PKD1L1Q8TDX9 2849 aa11.39□□□□□ -0.59
SKI-201ENST00000378536 PLAC4Q8WY50 150 aa11.39□□□□□ -0.59
SKI-201ENST00000378536 TPRXLQ17RH7 258 aa11.38□□□□□ -0.59
SKI-201ENST00000378536 H3BS24 57 aa11.31□□□□□ -0.6
SKI-201ENST00000378536 ROMO1P60602 79 aa11.31□□□□□ -0.6
SKI-201ENST00000378536 TGP01266 2768 aa11.31□□□□□ -0.6
SKI-201ENST00000378536 KRTAP16-1A8MUX0 517 aa11.29□□□□□ -0.6
SKI-201ENST00000378536 KRTAP10-8P60410 259 aa11.27□□□□□ -0.61
SKI-201ENST00000378536 A0A0A0MQY5 61 aa11.26□□□□□ -0.61
SKI-201ENST00000378536 KRTAP13-3Q3SY46 172 aa11.24□□□□□ -0.61
SKI-201ENST00000378536 TRRAPQ9Y4A5 3859 aa11.17□□□□□ -0.62
SKI-201ENST00000378536 A8MU10 97 aa11.16□□□□□ -0.62
SKI-201ENST00000378536 HUWE1Q7Z6Z7 4374 aaKnown RBP10.88□□□□□ -0.67
SKI-201ENST00000378536 FBN3Q75N90 2809 aa10.84□□□□□ -0.67
SKI-201ENST00000378536 A6NN06 94 aa10.83□□□□□ -0.67
SKI-201ENST00000378536 CUBNO60494 3623 aa10.83□□□□□ -0.68
SKI-201ENST00000378536 VPS13CQ709C8 3753 aa10.77□□□□□ -0.69
SKI-201ENST00000378536 AKAP9Q99996 3911 aa10.77□□□□□ -0.69
SKI-201ENST00000378536 KRTAP25-1Q3LHN0 102 aa10.71□□□□□ -0.7
SKI-201ENST00000378536 ZNF469Q96JG9 3925 aaPredicted RBP10.7□□□□□ -0.7
SKI-201ENST00000378536 MEGF8Q7Z7M0 2845 aa10.69□□□□□ -0.7
SKI-201ENST00000378536 TNP1P09430 55 aa10.69□□□□□ -0.7
SKI-201ENST00000378536 KRTAP10-10P60014 251 aa10.68□□□□□ -0.7
SKI-201ENST00000378536 H0YAA0 97 aa10.61□□□□□ -0.71
SKI-201ENST00000378536 P0C880 135 aa10.58□□□□□ -0.72
SKI-201ENST00000378536 MT1HL1P0DM35 61 aa10.54□□□□□ -0.72
SKI-201ENST00000378536 ALMS1Q8TCU4 4167 aa10.54□□□□□ -0.72
SKI-201ENST00000378536 DNAH9Q9NYC9 4486 aa10.5□□□□□ -0.73
SKI-201ENST00000378536 KRTAP10-4P60372 401 aaPredicted RBP10.49□□□□□ -0.73
SKI-201ENST00000378536 COL7A1Q02388 2944 aa10.43□□□□□ -0.74
SKI-201ENST00000378536 NDUFAF8A1L188 74 aa10.42□□□□□ -0.74
SKI-201ENST00000378536 SRRM2Q9UQ35 2752 aaKnown RBP10.4□□□□□ -0.74
SKI-201ENST00000378536 KRTAP3-1Q9BYR8 98 aa10.37□□□□□ -0.75
SKI-201ENST00000378536 KRTAP4-5Q9BYR2 181 aa10.36□□□□□ -0.75
SKI-201ENST00000378536 PP632Q6XCG6 107 aa10.33□□□□□ -0.76
SKI-201ENST00000378536 PRO2289Q9P1D8 64 aa10.32□□□□□ -0.76
SKI-201ENST00000378536 C10orf95Q9H7T3 257 aa10.23□□□□□ -0.77
SKI-201ENST00000378536 PLECQ15149 4684 aaKnown RBP10.1□□□□□ -0.79
SKI-201ENST00000378536 KRTAP12-2P59991 146 aa10.08□□□□□ -0.8
SKI-201ENST00000378536 DNAH1Q9P2D7 4330 aa10.05□□□□□ -0.8
SKI-201ENST00000378536 DNHD1Q96M86 4753 aa10.04□□□□□ -0.8
SKI-201ENST00000378536 DNAH5Q8TE73 4624 aa10.02□□□□□ -0.81
SKI-201ENST00000378536 KRTAP12-1P59990 96 aa9.96□□□□□ -0.82
SKI-201ENST00000378536 VPS13DQ5THJ4 4388 aa9.96□□□□□ -0.82
SKI-201ENST00000378536 KRTAP10-6P60371 365 aaPredicted RBP9.92□□□□□ -0.82
SKI-201ENST00000378536 CSMD3Q7Z407 3707 aa9.91□□□□□ -0.82
SKI-201ENST00000378536 ANK2Q01484 3957 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 194.6 ms