RNA–Protein interactions for RNA: ENST00000378251.2

LRRC47-201, Transcript of leucine rich repeat containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC47, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-201ENST00000378251 LCA10Q71F78 164 aa9.78□□□□□ -0.84
LRRC47-201ENST00000378251 CDC42SE1Q9NRR8 79 aa9.75□□□□□ -0.85
LRRC47-201ENST00000378251 UQCR11O14957 56 aa9.74□□□□□ -0.85
LRRC47-201ENST00000378251 TRRAPQ9Y4A5 3859 aa9.72□□□□□ -0.85
LRRC47-201ENST00000378251 RBM12B-AS1Q9P1G2 102 aa9.72□□□□□ -0.85
LRRC47-201ENST00000378251 Q5VSD8 79 aa9.71□□□□□ -0.86
LRRC47-201ENST00000378251 KRTAP11-1Q8IUC1 163 aa9.71□□□□□ -0.86
LRRC47-201ENST00000378251 Q8N9P0 234 aaPredicted RBP9.7□□□□□ -0.86
LRRC47-201ENST00000378251 MIR22HGQ0VDD5 57 aa9.67□□□□□ -0.86
LRRC47-201ENST00000378251 KRTAP4-16G5E9R7 235 aaPredicted RBP9.65□□□□□ -0.86
LRRC47-201ENST00000378251 KRTAP7-1Q8IUC3 87 aa9.65□□□□□ -0.86
LRRC47-201ENST00000378251 SPRR1BP22528 89 aa9.64□□□□□ -0.87
LRRC47-201ENST00000378251 Q5VV11 94 aa9.64□□□□□ -0.87
LRRC47-201ENST00000378251 IGLV7-46A0A075B6I9 117 aa9.61□□□□□ -0.87
LRRC47-201ENST00000378251 Q75L30 129 aa9.61□□□□□ -0.87
LRRC47-201ENST00000378251 A0A087X002 238 aa9.58□□□□□ -0.88
LRRC47-201ENST00000378251 COX6B2Q6YFQ2 88 aa9.58□□□□□ -0.88
LRRC47-201ENST00000378251 LINC01558Q9Y6Z2 57 aa9.52□□□□□ -0.89
LRRC47-201ENST00000378251 ANK3Q12955 4377 aaKnown RBP9.51□□□□□ -0.89
LRRC47-201ENST00000378251 LINC00472Q9H8W2 130 aa9.5□□□□□ -0.89
LRRC47-201ENST00000378251 PRAC1Q96KF2 57 aa9.5□□□□□ -0.89
LRRC47-201ENST00000378251 FBN3Q75N90 2809 aa9.49□□□□□ -0.89
LRRC47-201ENST00000378251 Q8N1X5 172 aa9.48□□□□□ -0.89
LRRC47-201ENST00000378251 VPS13CQ709C8 3753 aa9.47□□□□□ -0.89
LRRC47-201ENST00000378251 SPINT4Q6UDR6 99 aa9.46□□□□□ -0.9
LRRC47-201ENST00000378251 MMP24-AS1A0A0U1RRL7 71 aa9.46□□□□□ -0.9
LRRC47-201ENST00000378251 SPINK7P58062 85 aa9.46□□□□□ -0.9
LRRC47-201ENST00000378251 LINC01554Q52M75 96 aa9.45□□□□□ -0.9
LRRC47-201ENST00000378251 LINC00483Q53H64 154 aa9.43□□□□□ -0.9
LRRC47-201ENST00000378251 COL7A1Q02388 2944 aa9.43□□□□□ -0.9
LRRC47-201ENST00000378251 HRES1P13985 223 aa9.42□□□□□ -0.9
LRRC47-201ENST00000378251 ZCCHC13Q8WW36 166 aaKnown RBP9.41□□□□□ -0.9
LRRC47-201ENST00000378251 Q6ZSA8 131 aa9.4□□□□□ -0.9
LRRC47-201ENST00000378251 ZNF469Q96JG9 3925 aaPredicted RBP9.39□□□□□ -0.91
LRRC47-201ENST00000378251 H3BS24 57 aa9.36□□□□□ -0.91
LRRC47-201ENST00000378251 KRTAP13-1Q8IUC0 172 aa9.33□□□□□ -0.92
LRRC47-201ENST00000378251 KRTAP13-2Q52LG2 175 aa9.31□□□□□ -0.92
LRRC47-201ENST00000378251 A8MU10 97 aa9.29□□□□□ -0.92
LRRC47-201ENST00000378251 KRTAP29-1A8MX34 341 aaPredicted RBP9.29□□□□□ -0.92
LRRC47-201ENST00000378251 NOTCH2NLQ7Z3S9 236 aa9.28□□□□□ -0.92
LRRC47-201ENST00000378251 CSAG1Q6PB30 78 aa9.26□□□□□ -0.93
LRRC47-201ENST00000378251 Q5W150 140 aa9.22□□□□□ -0.93
LRRC47-201ENST00000378251 CRIPTQ9P021 101 aa9.21□□□□□ -0.94
LRRC47-201ENST00000378251 MEGF8Q7Z7M0 2845 aa9.19□□□□□ -0.94
LRRC47-201ENST00000378251 A6NN06 94 aa9.16□□□□□ -0.94
LRRC47-201ENST00000378251 A0A1B0GU33 70 aa9.15□□□□□ -0.94
LRRC47-201ENST00000378251 A0A0D9SG42 100 aa9.14□□□□□ -0.95
LRRC47-201ENST00000378251 M0R2T5 61 aa9.12□□□□□ -0.95
LRRC47-201ENST00000378251 SEC61BP60468 96 aaKnown RBP9.11□□□□□ -0.95
LRRC47-201ENST00000378251 DMAC1Q96GE9 116 aa9.06□□□□□ -0.96
LRRC47-201ENST00000378251 KRTAP1-4P0C5Y4 121 aa9.05□□□□□ -0.96
LRRC47-201ENST00000378251 ADM2Q7Z4H4 148 aa9.01□□□□□ -0.97
LRRC47-201ENST00000378251 ASB16-AS1Q495Z4 193 aa9.01□□□□□ -0.97
LRRC47-201ENST00000378251 SPATA8Q6RVD6 105 aa8.98□□□□□ -0.97
LRRC47-201ENST00000378251 AKAP9Q99996 3911 aa8.97□□□□□ -0.97
LRRC47-201ENST00000378251 RPS29P62273 56 aaKnown RBP8.96□□□□□ -0.98
LRRC47-201ENST00000378251 A0A1B0GVY2 172 aa8.91□□□□□ -0.98
LRRC47-201ENST00000378251 S4R3F8 94 aa8.9□□□□□ -0.98
LRRC47-201ENST00000378251 DNHD1Q96M86 4753 aa8.84□□□□□ -0.99
LRRC47-201ENST00000378251 RPL37P61927 97 aaKnown RBP8.77□□□□□ -1.01
LRRC47-201ENST00000378251 CSMD3Q7Z407 3707 aa8.76□□□□□ -1.01
LRRC47-201ENST00000378251 H1FX-AS1Q4G0G2 97 aa8.76□□□□□ -1.01
LRRC47-201ENST00000378251 ROMO1P60602 79 aa8.75□□□□□ -1.01
LRRC47-201ENST00000378251 LUZP6Q538Z0 58 aa8.74□□□□□ -1.01
LRRC47-201ENST00000378251 KRTAP25-1Q3LHN0 102 aa8.72□□□□□ -1.01
LRRC47-201ENST00000378251 R4GN34 69 aa8.71□□□□□ -1.02
LRRC47-201ENST00000378251 A8MUU9 505 aa8.69□□□□□ -1.02
LRRC47-201ENST00000378251 HUWE1Q7Z6Z7 4374 aaKnown RBP8.68□□□□□ -1.02
LRRC47-201ENST00000378251 CAMK2N1Q7Z7J9 78 aa8.68□□□□□ -1.02
LRRC47-201ENST00000378251 XP32Q5T750 250 aa8.67□□□□□ -1.02
LRRC47-201ENST00000378251 C20orf166-AS1Q96NR2 134 aa8.66□□□□□ -1.02
LRRC47-201ENST00000378251 KRTAP10-8P60410 259 aa8.62□□□□□ -1.03
LRRC47-201ENST00000378251 M0QZ58 72 aa8.57□□□□□ -1.04
LRRC47-201ENST00000378251 TPRXLQ17RH7 258 aa8.5□□□□□ -1.05
LRRC47-201ENST00000378251 KRTAP13-3Q3SY46 172 aa8.5□□□□□ -1.05
LRRC47-201ENST00000378251 KRTAP16-1A8MUX0 517 aa8.5□□□□□ -1.05
LRRC47-201ENST00000378251 DNAH9Q9NYC9 4486 aa8.5□□□□□ -1.05
LRRC47-201ENST00000378251 NDUFAF8A1L188 74 aa8.49□□□□□ -1.05
LRRC47-201ENST00000378251 A0A0A0MQY5 61 aa8.46□□□□□ -1.05
LRRC47-201ENST00000378251 PLECQ15149 4684 aaKnown RBP8.34□□□□□ -1.07
LRRC47-201ENST00000378251 KRTAP4-5Q9BYR2 181 aa8.34□□□□□ -1.07
LRRC47-201ENST00000378251 H0YAA0 97 aa8.32□□□□□ -1.08
LRRC47-201ENST00000378251 PRKDCP78527 4128 aaKnown RBP8.27□□□□□ -1.08
LRRC47-201ENST00000378251 MT1HL1P0DM35 61 aa8.23□□□□□ -1.09
LRRC47-201ENST00000378251 PLAC4Q8WY50 150 aa8.23□□□□□ -1.09
LRRC47-201ENST00000378251 DNAH5Q8TE73 4624 aa8.22□□□□□ -1.09
LRRC47-201ENST00000378251 C10orf95Q9H7T3 257 aa8.21□□□□□ -1.09
LRRC47-201ENST00000378251 KRTAP10-4P60372 401 aaPredicted RBP8.2□□□□□ -1.1
LRRC47-201ENST00000378251 DNAH11Q96DT5 4516 aa8.2□□□□□ -1.1
LRRC47-201ENST00000378251 STARD9Q9P2P6 4700 aa8.16□□□□□ -1.1
LRRC47-201ENST00000378251 DNAH1Q9P2D7 4330 aa8.09□□□□□ -1.11
LRRC47-201ENST00000378251 DNAH10Q8IVF4 4471 aa8.09□□□□□ -1.12
LRRC47-201ENST00000378251 FAT1Q14517 4588 aa8.07□□□□□ -1.12
LRRC47-201ENST00000378251 KRTAP10-10P60014 251 aa8.05□□□□□ -1.12
LRRC47-201ENST00000378251 P0C880 135 aa8.04□□□□□ -1.12
LRRC47-201ENST00000378251 ANK2Q01484 3957 aa7.99□□□□□ -1.13
LRRC47-201ENST00000378251 KIAA1109Q2LD37 5005 aa7.99□□□□□ -1.13
LRRC47-201ENST00000378251 VPS13DQ5THJ4 4388 aa7.98□□□□□ -1.13
LRRC47-201ENST00000378251 DYNC1H1Q14204 4646 aaKnown RBP7.96□□□□□ -1.13
LRRC47-201ENST00000378251 RYR1P21817 5038 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms