RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 C8orf17Q9NRJ1 99 aa10.01□□□□□ -0.81
PCDHA1-201ENST00000378133 SPACA4Q8TDM5 124 aa10.01□□□□□ -0.81
PCDHA1-201ENST00000378133 PLAC8Q9NZF1 115 aa10□□□□□ -0.81
PCDHA1-201ENST00000378133 NUPR2A6NF83 97 aa9.99□□□□□ -0.81
PCDHA1-201ENST00000378133 LINC00313P59037 77 aa9.99□□□□□ -0.81
PCDHA1-201ENST00000378133 IGHV6-1A0A0B4J1U7 121 aa9.98□□□□□ -0.81
PCDHA1-201ENST00000378133 HRES1P13985 223 aa9.98□□□□□ -0.81
PCDHA1-201ENST00000378133 SPINK7P58062 85 aa9.97□□□□□ -0.81
PCDHA1-201ENST00000378133 STARD9Q9P2P6 4700 aa9.95□□□□□ -0.82
PCDHA1-201ENST00000378133 A0A087WTM6 91 aa9.94□□□□□ -0.82
PCDHA1-201ENST00000378133 ADM2Q7Z4H4 148 aa9.94□□□□□ -0.82
PCDHA1-201ENST00000378133 FBN3Q75N90 2809 aa9.94□□□□□ -0.82
PCDHA1-201ENST00000378133 A0A1B0GVX0 72 aa9.93□□□□□ -0.82
PCDHA1-201ENST00000378133 ANAPC11Q9NYG5 84 aa9.93□□□□□ -0.82
PCDHA1-201ENST00000378133 LINC00483Q53H64 154 aa9.92□□□□□ -0.82
PCDHA1-201ENST00000378133 FRAS1Q86XX4 4008 aa9.92□□□□□ -0.82
PCDHA1-201ENST00000378133 CDK2AP2O75956 126 aa9.92□□□□□ -0.82
PCDHA1-201ENST00000378133 MRPL34Q9BQ48 92 aaKnown RBP9.92□□□□□ -0.82
PCDHA1-201ENST00000378133 VPS13DQ5THJ4 4388 aa9.92□□□□□ -0.82
PCDHA1-201ENST00000378133 PSORS1C2Q9UIG4 136 aa9.91□□□□□ -0.82
PCDHA1-201ENST00000378133 HECTD4Q9Y4D8 3996 aa9.91□□□□□ -0.82
PCDHA1-201ENST00000378133 LINC01554Q52M75 96 aa9.9□□□□□ -0.82
PCDHA1-201ENST00000378133 WWC2-AS2Q96NR7 200 aa9.9□□□□□ -0.83
PCDHA1-201ENST00000378133 PRR26Q8N8Z3 221 aa9.89□□□□□ -0.83
PCDHA1-201ENST00000378133 RTL8CO15255 209 aa9.89□□□□□ -0.83
PCDHA1-201ENST00000378133 KMT2AQ03164 3969 aa9.88□□□□□ -0.83
PCDHA1-201ENST00000378133 IGLV5-52A0A0A0MRZ9 124 aa9.88□□□□□ -0.83
PCDHA1-201ENST00000378133 DNAH8Q96JB1 4490 aa9.87□□□□□ -0.83
PCDHA1-201ENST00000378133 A0A087X002 238 aa9.87□□□□□ -0.83
PCDHA1-201ENST00000378133 NOTCH2NLQ7Z3S9 236 aa9.87□□□□□ -0.83
PCDHA1-201ENST00000378133 ZNF706Q9Y5V0 76 aaPredicted RBP9.87□□□□□ -0.83
PCDHA1-201ENST00000378133 ZNF861PO60384 105 aa9.84□□□□□ -0.83
PCDHA1-201ENST00000378133 DNAH2Q9P225 4427 aa9.83□□□□□ -0.84
PCDHA1-201ENST00000378133 TGP01266 2768 aa9.81□□□□□ -0.84
PCDHA1-201ENST00000378133 Q5W150 140 aa9.79□□□□□ -0.84
PCDHA1-201ENST00000378133 DNAH17Q9UFH2 4485 aa9.79□□□□□ -0.84
PCDHA1-201ENST00000378133 ACYP2P14621 99 aa9.76□□□□□ -0.85
PCDHA1-201ENST00000378133 SPINK6Q6UWN8 80 aa9.76□□□□□ -0.85
PCDHA1-201ENST00000378133 PLA2G1BP04054 148 aaKnown RBP9.75□□□□□ -0.85
PCDHA1-201ENST00000378133 KRTAP13-3Q3SY46 172 aa9.72□□□□□ -0.85
PCDHA1-201ENST00000378133 IGLV7-43P04211 117 aa9.71□□□□□ -0.85
PCDHA1-201ENST00000378133 CIRBP-AS1Q8TBR5 109 aa9.71□□□□□ -0.85
PCDHA1-201ENST00000378133 C1orf134Q5TEV5 83 aa9.7□□□□□ -0.86
PCDHA1-201ENST00000378133 ALMS1Q8TCU4 4167 aa9.67□□□□□ -0.86
PCDHA1-201ENST00000378133 DNAH6Q9C0G6 4158 aa9.66□□□□□ -0.86
PCDHA1-201ENST00000378133 DMAC1Q96GE9 116 aa9.64□□□□□ -0.87
PCDHA1-201ENST00000378133 A0A1B0GU69 56 aa9.63□□□□□ -0.87
PCDHA1-201ENST00000378133 LY6G6CO95867 125 aa9.63□□□□□ -0.87
PCDHA1-201ENST00000378133 DNAH11Q96DT5 4516 aa9.62□□□□□ -0.87
PCDHA1-201ENST00000378133 RETNLBQ9BQ08 111 aa9.6□□□□□ -0.87
PCDHA1-201ENST00000378133 SSBP3-AS1Q7Z2R9 100 aa9.59□□□□□ -0.87
PCDHA1-201ENST00000378133 KRTAP10-2P60368 255 aa9.58□□□□□ -0.88
PCDHA1-201ENST00000378133 CSAG1Q6PB30 78 aa9.57□□□□□ -0.88
PCDHA1-201ENST00000378133 DNAH5Q8TE73 4624 aa9.57□□□□□ -0.88
PCDHA1-201ENST00000378133 SPATA8Q6RVD6 105 aa9.56□□□□□ -0.88
PCDHA1-201ENST00000378133 FAM229AH3BQW9 127 aa9.54□□□□□ -0.88
PCDHA1-201ENST00000378133 HYDINQ4G0P3 5121 aa9.53□□□□□ -0.88
PCDHA1-201ENST00000378133 MIR22HGQ0VDD5 57 aa9.52□□□□□ -0.89
PCDHA1-201ENST00000378133 IGKV2-30P06310 120 aa9.51□□□□□ -0.89
PCDHA1-201ENST00000378133 UQCR11O14957 56 aa9.5□□□□□ -0.89
PCDHA1-201ENST00000378133 KRTAP13-2Q52LG2 175 aa9.5□□□□□ -0.89
PCDHA1-201ENST00000378133 LRP1BQ9NZR2 4599 aa9.48□□□□□ -0.89
PCDHA1-201ENST00000378133 KRTAP10-1P60331 282 aa9.45□□□□□ -0.9
PCDHA1-201ENST00000378133 Q6ZSA8 131 aa9.4□□□□□ -0.9
PCDHA1-201ENST00000378133 PKD1P98161 4303 aa9.4□□□□□ -0.9
PCDHA1-201ENST00000378133 IGKV2D-30A0A075B6S6 120 aa9.4□□□□□ -0.91
PCDHA1-201ENST00000378133 SACSQ9NZJ4 4579 aa9.39□□□□□ -0.91
PCDHA1-201ENST00000378133 VPS13BQ7Z7G8 4022 aa9.37□□□□□ -0.91
PCDHA1-201ENST00000378133 FAT2Q9NYQ8 4349 aa9.37□□□□□ -0.91
PCDHA1-201ENST00000378133 KRTAP1-4P0C5Y4 121 aa9.37□□□□□ -0.91
PCDHA1-201ENST00000378133 KRTAP16-1A8MUX0 517 aa9.37□□□□□ -0.91
PCDHA1-201ENST00000378133 SPINK1P00995 79 aa9.27□□□□□ -0.92
PCDHA1-201ENST00000378133 ROMO1P60602 79 aa9.27□□□□□ -0.92
PCDHA1-201ENST00000378133 TYMSOSQ8TAI1 123 aa9.27□□□□□ -0.93
PCDHA1-201ENST00000378133 RYR2Q92736 4967 aa9.24□□□□□ -0.93
PCDHA1-201ENST00000378133 KMT2CQ8NEZ4 4911 aaKnown RBP9.24□□□□□ -0.93
PCDHA1-201ENST00000378133 Q8N1X5 172 aa9.2□□□□□ -0.94
PCDHA1-201ENST00000378133 PKHD1P08F94 4074 aa9.17□□□□□ -0.94
PCDHA1-201ENST00000378133 KRTAP25-1Q3LHN0 102 aa9.13□□□□□ -0.95
PCDHA1-201ENST00000378133 LINC00304Q8N9R0 145 aa9.12□□□□□ -0.95
PCDHA1-201ENST00000378133 A0A1B0GVY2 172 aa9.11□□□□□ -0.95
PCDHA1-201ENST00000378133 P0C880 135 aa9.1□□□□□ -0.95
PCDHA1-201ENST00000378133 H0YAA0 97 aa9.09□□□□□ -0.95
PCDHA1-201ENST00000378133 SMR3BP02814 79 aaPredicted RBP9.08□□□□□ -0.96
PCDHA1-201ENST00000378133 A8MUU9 505 aa9.07□□□□□ -0.96
PCDHA1-201ENST00000378133 RYR3Q15413 4870 aa9.05□□□□□ -0.96
PCDHA1-201ENST00000378133 DYNC1H1Q14204 4646 aaKnown RBP9.04□□□□□ -0.96
PCDHA1-201ENST00000378133 FLG2Q5D862 2391 aaPredicted RBP9.03□□□□□ -0.96
PCDHA1-201ENST00000378133 RPS29P62273 56 aaKnown RBP9.03□□□□□ -0.96
PCDHA1-201ENST00000378133 C9orf92A6NGG3 77 aa9.02□□□□□ -0.97
PCDHA1-201ENST00000378133 A0A1B0GU33 70 aa9.01□□□□□ -0.97
PCDHA1-201ENST00000378133 FAT1Q14517 4588 aa8.99□□□□□ -0.97
PCDHA1-201ENST00000378133 CRIPTQ9P021 101 aa8.97□□□□□ -0.97
PCDHA1-201ENST00000378133 APOBP04114 4563 aaKnown RBP8.94□□□□□ -0.98
PCDHA1-201ENST00000378133 H1FX-AS1Q4G0G2 97 aa8.94□□□□□ -0.98
PCDHA1-201ENST00000378133 C20orf166-AS1Q96NR2 134 aa8.91□□□□□ -0.98
PCDHA1-201ENST00000378133 KRTAP3-1Q9BYR8 98 aa8.91□□□□□ -0.98
PCDHA1-201ENST00000378133 PKHD1L1Q86WI1 4243 aa8.89□□□□□ -0.99
PCDHA1-201ENST00000378133 KRTAP10-4P60372 401 aaPredicted RBP8.87□□□□□ -0.99
PCDHA1-201ENST00000378133 K7ERS5 55 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms