RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 DMXL1Q9Y485 3027 aa11.16□□□□□ -0.62
PCDH8-202ENST00000377942 DNAH14Q0VDD8 3507 aa11.14□□□□□ -0.63
PCDH8-202ENST00000377942 FREM2Q5SZK8 3169 aa11.11□□□□□ -0.63
PCDH8-202ENST00000377942 RPL37P61927 97 aaKnown RBP11.11□□□□□ -0.63
PCDH8-202ENST00000377942 HRNRQ86YZ3 2850 aaPredicted RBP11.11□□□□□ -0.63
PCDH8-202ENST00000377942 H1FX-AS1Q4G0G2 97 aa11.1□□□□□ -0.63
PCDH8-202ENST00000377942 DCHS2Q6V1P9 2916 aa11.09□□□□□ -0.63
PCDH8-202ENST00000377942 ASH1LQ9NR48 2969 aaKnown RBP11.08□□□□□ -0.63
PCDH8-202ENST00000377942 M0QZ58 72 aa11.07□□□□□ -0.64
PCDH8-202ENST00000377942 CRYBG3Q68DQ2 2970 aa11.07□□□□□ -0.64
PCDH8-202ENST00000377942 LUZP6Q538Z0 58 aa11.02□□□□□ -0.65
PCDH8-202ENST00000377942 ADM2Q7Z4H4 148 aa11□□□□□ -0.65
PCDH8-202ENST00000377942 SPTBN5Q9NRC6 3674 aaKnown RBP11□□□□□ -0.65
PCDH8-202ENST00000377942 USP34Q70CQ2 3546 aa10.97□□□□□ -0.65
PCDH8-202ENST00000377942 H3BS24 57 aa10.9□□□□□ -0.66
PCDH8-202ENST00000377942 ROMO1P60602 79 aa10.89□□□□□ -0.67
PCDH8-202ENST00000377942 A8MUU9 505 aa10.89□□□□□ -0.67
PCDH8-202ENST00000377942 NF1P21359 2839 aa10.88□□□□□ -0.67
PCDH8-202ENST00000377942 PLAC4Q8WY50 150 aa10.88□□□□□ -0.67
PCDH8-202ENST00000377942 CFAP47Q6ZTR5 3102 aa10.88□□□□□ -0.67
PCDH8-202ENST00000377942 C20orf166-AS1Q96NR2 134 aa10.86□□□□□ -0.67
PCDH8-202ENST00000377942 KRTAP1-4P0C5Y4 121 aa10.86□□□□□ -0.67
PCDH8-202ENST00000377942 PRAC1Q96KF2 57 aa10.84□□□□□ -0.67
PCDH8-202ENST00000377942 FBN2P35556 2912 aa10.83□□□□□ -0.68
PCDH8-202ENST00000377942 SPATA8Q6RVD6 105 aa10.83□□□□□ -0.68
PCDH8-202ENST00000377942 LOC400499M0QZD8 3231 aa10.76□□□□□ -0.69
PCDH8-202ENST00000377942 MXRA5Q9NR99 2828 aa10.74□□□□□ -0.69
PCDH8-202ENST00000377942 SPEGQ15772 3267 aa10.68□□□□□ -0.7
PCDH8-202ENST00000377942 TENM1Q9UKZ4 2725 aa10.66□□□□□ -0.7
PCDH8-202ENST00000377942 TENM3Q9P273 2699 aa10.64□□□□□ -0.71
PCDH8-202ENST00000377942 XP32Q5T750 250 aa10.62□□□□□ -0.71
PCDH8-202ENST00000377942 A6NN06 94 aa10.62□□□□□ -0.71
PCDH8-202ENST00000377942 TENM2Q9NT68 2774 aa10.58□□□□□ -0.72
PCDH8-202ENST00000377942 TPRXLQ17RH7 258 aa10.56□□□□□ -0.72
PCDH8-202ENST00000377942 A8MU10 97 aa10.55□□□□□ -0.72
PCDH8-202ENST00000377942 PDZD2O15018 2839 aa10.54□□□□□ -0.72
PCDH8-202ENST00000377942 CELSR1Q9NYQ6 3014 aa10.51□□□□□ -0.73
PCDH8-202ENST00000377942 A0A1B0GVY2 172 aa10.48□□□□□ -0.73
PCDH8-202ENST00000377942 KRTAP16-1A8MUX0 517 aa10.42□□□□□ -0.74
PCDH8-202ENST00000377942 KRTAP13-3Q3SY46 172 aa10.37□□□□□ -0.75
PCDH8-202ENST00000377942 KRTAP10-8P60410 259 aa10.35□□□□□ -0.75
PCDH8-202ENST00000377942 A0A0A0MQY5 61 aa10.31□□□□□ -0.76
PCDH8-202ENST00000377942 DCHS1Q96JQ0 3298 aa10.3□□□□□ -0.76
PCDH8-202ENST00000377942 KRTAP25-1Q3LHN0 102 aa10.29□□□□□ -0.76
PCDH8-202ENST00000377942 MYO15AQ9UKN7 3530 aa10.28□□□□□ -0.76
PCDH8-202ENST00000377942 PKD1L1Q8TDX9 2849 aa10.28□□□□□ -0.76
PCDH8-202ENST00000377942 TNP1P09430 55 aa10.27□□□□□ -0.77
PCDH8-202ENST00000377942 RELNP78509 3460 aa10.26□□□□□ -0.77
PCDH8-202ENST00000377942 OTOGQ6ZRI0 2925 aa10.25□□□□□ -0.77
PCDH8-202ENST00000377942 TGP01266 2768 aa10.2□□□□□ -0.78
PCDH8-202ENST00000377942 WDFY3Q8IZQ1 3526 aa10.06□□□□□ -0.8
PCDH8-202ENST00000377942 VWFP04275 2813 aa10.05□□□□□ -0.8
PCDH8-202ENST00000377942 PP632Q6XCG6 107 aa10.01□□□□□ -0.81
PCDH8-202ENST00000377942 FBN1P35555 2871 aaKnown RBP10□□□□□ -0.81
PCDH8-202ENST00000377942 KRTAP10-10P60014 251 aa10□□□□□ -0.81
PCDH8-202ENST00000377942 H0YAA0 97 aa9.97□□□□□ -0.81
PCDH8-202ENST00000377942 LAMA5O15230 3695 aa9.92□□□□□ -0.82
PCDH8-202ENST00000377942 NBPF19A0A087WUL8 3843 aa9.92□□□□□ -0.82
PCDH8-202ENST00000377942 P0C880 135 aa9.88□□□□□ -0.83
PCDH8-202ENST00000377942 ANK3Q12955 4377 aaKnown RBP9.86□□□□□ -0.83
PCDH8-202ENST00000377942 PRO2289Q9P1D8 64 aa9.84□□□□□ -0.83
PCDH8-202ENST00000377942 ASPMQ8IZT6 3477 aa9.8□□□□□ -0.84
PCDH8-202ENST00000377942 MUC3AQ02505 3323 aa9.74□□□□□ -0.85
PCDH8-202ENST00000377942 ZFHX3Q15911 3703 aa9.74□□□□□ -0.85
PCDH8-202ENST00000377942 C10orf95Q9H7T3 257 aa9.71□□□□□ -0.86
PCDH8-202ENST00000377942 NDUFAF8A1L188 74 aa9.68□□□□□ -0.86
PCDH8-202ENST00000377942 ZFHX4Q86UP3 3567 aa9.67□□□□□ -0.86
PCDH8-202ENST00000377942 DMDP11532 3685 aa9.65□□□□□ -0.86
PCDH8-202ENST00000377942 FBN3Q75N90 2809 aa9.61□□□□□ -0.87
PCDH8-202ENST00000377942 CSMD1Q96PZ7 3565 aa9.59□□□□□ -0.87
PCDH8-202ENST00000377942 SRRM2Q9UQ35 2752 aaKnown RBP9.56□□□□□ -0.88
PCDH8-202ENST00000377942 KRTAP3-1Q9BYR8 98 aa9.54□□□□□ -0.88
PCDH8-202ENST00000377942 MT1HL1P0DM35 61 aa9.53□□□□□ -0.88
PCDH8-202ENST00000377942 SMG1Q96Q15 3661 aaKnown RBP9.5□□□□□ -0.89
PCDH8-202ENST00000377942 MEGF8Q7Z7M0 2845 aa9.5□□□□□ -0.89
PCDH8-202ENST00000377942 KRTAP12-2P59991 146 aa9.4□□□□□ -0.9
PCDH8-202ENST00000377942 KRTAP10-4P60372 401 aaPredicted RBP9.39□□□□□ -0.91
PCDH8-202ENST00000377942 TRRAPQ9Y4A5 3859 aa9.38□□□□□ -0.91
PCDH8-202ENST00000377942 CSMD2Q7Z408 3487 aa9.36□□□□□ -0.91
PCDH8-202ENST00000377942 KRTAP12-1P59990 96 aa9.35□□□□□ -0.91
PCDH8-202ENST00000377942 KRTAP13-4Q3LI77 160 aa9.33□□□□□ -0.92
PCDH8-202ENST00000377942 COL7A1Q02388 2944 aa9.3□□□□□ -0.92
PCDH8-202ENST00000377942 SPENQ96T58 3664 aaKnown RBP9.27□□□□□ -0.93
PCDH8-202ENST00000377942 KRTAP10-6P60371 365 aaPredicted RBP9.22□□□□□ -0.93
PCDH8-202ENST00000377942 HUWE1Q7Z6Z7 4374 aaKnown RBP9.21□□□□□ -0.93
PCDH8-202ENST00000377942 SVEP1Q4LDE5 3571 aa9.2□□□□□ -0.94
PCDH8-202ENST00000377942 BSNQ9UPA5 3926 aa9.19□□□□□ -0.94
PCDH8-202ENST00000377942 KRTAP4-5Q9BYR2 181 aa9.17□□□□□ -0.94
PCDH8-202ENST00000377942 ALMS1Q8TCU4 4167 aa9.04□□□□□ -0.96
PCDH8-202ENST00000377942 KRTAP3-3Q9BYR6 98 aa8.98□□□□□ -0.97
PCDH8-202ENST00000377942 CUBNO60494 3623 aa8.97□□□□□ -0.97
PCDH8-202ENST00000377942 KRTAP3-2Q9BYR7 98 aa8.93□□□□□ -0.98
PCDH8-202ENST00000377942 DNAH9Q9NYC9 4486 aa8.87□□□□□ -0.99
PCDH8-202ENST00000377942 KRTAP15-1Q3LI76 137 aa8.78□□□□□ -1
PCDH8-202ENST00000377942 DNAH5Q8TE73 4624 aa8.71□□□□□ -1.02
PCDH8-202ENST00000377942 VPS13CQ709C8 3753 aa8.69□□□□□ -1.02
PCDH8-202ENST00000377942 KRTAP10-12P60413 245 aa8.63□□□□□ -1.03
PCDH8-202ENST00000377942 AKAP9Q99996 3911 aa8.62□□□□□ -1.03
PCDH8-202ENST00000377942 DNAH10Q8IVF4 4471 aa8.6□□□□□ -1.03
PCDH8-202ENST00000377942 DNAH11Q96DT5 4516 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms