RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 A8MWP4 228 aa9.43□□□□□ -0.9
FXN-201ENST00000377270 CHTF8P0CG12 524 aa9.43□□□□□ -0.9
FXN-201ENST00000377270 PRLHP81277 87 aa9.42□□□□□ -0.9
FXN-201ENST00000377270 ZNF861PO60384 105 aa9.41□□□□□ -0.9
FXN-201ENST00000377270 NBDYA0A0U1RRE5 68 aa9.4□□□□□ -0.9
FXN-201ENST00000377270 NUPR2A6NF83 97 aa9.39□□□□□ -0.91
FXN-201ENST00000377270 A0A1B0GU69 56 aa9.38□□□□□ -0.91
FXN-201ENST00000377270 LINC00472Q9H8W2 130 aa9.38□□□□□ -0.91
FXN-201ENST00000377270 KRTAP25-1Q3LHN0 102 aa9.36□□□□□ -0.91
FXN-201ENST00000377270 KRTAP11-1Q8IUC1 163 aa9.36□□□□□ -0.91
FXN-201ENST00000377270 MMP24-AS1A0A0U1RRL7 71 aa9.35□□□□□ -0.91
FXN-201ENST00000377270 UQCR11O14957 56 aa9.34□□□□□ -0.91
FXN-201ENST00000377270 Q6ZRN7 208 aaPredicted RBP9.34□□□□□ -0.91
FXN-201ENST00000377270 SRRM2Q9UQ35 2752 aaKnown RBP9.32□□□□□ -0.92
FXN-201ENST00000377270 STARD9Q9P2P6 4700 aa9.31□□□□□ -0.92
FXN-201ENST00000377270 PANO1I0J062 215 aa9.3□□□□□ -0.92
FXN-201ENST00000377270 TP53AIP1Q9HCN2 124 aa9.3□□□□□ -0.92
FXN-201ENST00000377270 PRKDCP78527 4128 aaKnown RBP9.3□□□□□ -0.92
FXN-201ENST00000377270 VPS13DQ5THJ4 4388 aa9.27□□□□□ -0.93
FXN-201ENST00000377270 MEGF8Q7Z7M0 2845 aa9.24□□□□□ -0.93
FXN-201ENST00000377270 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.23□□□□□ -0.93
FXN-201ENST00000377270 A0A087WTM6 91 aa9.22□□□□□ -0.93
FXN-201ENST00000377270 A8MUU9 505 aa9.22□□□□□ -0.93
FXN-201ENST00000377270 SPRR1BP22528 89 aa9.22□□□□□ -0.93
FXN-201ENST00000377270 LINC00483Q53H64 154 aa9.22□□□□□ -0.93
FXN-201ENST00000377270 NOTCH2NLQ7Z3S9 236 aa9.22□□□□□ -0.93
FXN-201ENST00000377270 IGLV5-52A0A0A0MRZ9 124 aa9.21□□□□□ -0.93
FXN-201ENST00000377270 ALMS1Q8TCU4 4167 aa9.21□□□□□ -0.94
FXN-201ENST00000377270 ACYP2P14621 99 aa9.21□□□□□ -0.94
FXN-201ENST00000377270 SPACA4Q8TDM5 124 aa9.21□□□□□ -0.94
FXN-201ENST00000377270 KRTAP16-1A8MUX0 517 aa9.18□□□□□ -0.94
FXN-201ENST00000377270 KRTAP13-1Q8IUC0 172 aa9.18□□□□□ -0.94
FXN-201ENST00000377270 C8orf17Q9NRJ1 99 aa9.17□□□□□ -0.94
FXN-201ENST00000377270 KMT2AQ03164 3969 aa9.16□□□□□ -0.94
FXN-201ENST00000377270 DNHD1Q96M86 4753 aa9.16□□□□□ -0.94
FXN-201ENST00000377270 DNAH2Q9P225 4427 aa9.15□□□□□ -0.94
FXN-201ENST00000377270 HECTD4Q9Y4D8 3996 aa9.15□□□□□ -0.94
FXN-201ENST00000377270 Q96NJ1 140 aa9.14□□□□□ -0.95
FXN-201ENST00000377270 DMAC1Q96GE9 116 aa9.11□□□□□ -0.95
FXN-201ENST00000377270 TGP01266 2768 aa9.11□□□□□ -0.95
FXN-201ENST00000377270 NDUFAF8A1L188 74 aa9.11□□□□□ -0.95
FXN-201ENST00000377270 IGLV9-49A0A0B4J1Y8 123 aa9.09□□□□□ -0.95
FXN-201ENST00000377270 PSORS1C2Q9UIG4 136 aa9.09□□□□□ -0.95
FXN-201ENST00000377270 DNAH17Q9UFH2 4485 aa9.09□□□□□ -0.95
FXN-201ENST00000377270 MRPL34Q9BQ48 92 aaKnown RBP9.08□□□□□ -0.96
FXN-201ENST00000377270 A0A1B0GVX0 72 aa9.07□□□□□ -0.96
FXN-201ENST00000377270 LY6G6CO95867 125 aa9.06□□□□□ -0.96
FXN-201ENST00000377270 C20orf166-AS1Q96NR2 134 aa9.05□□□□□ -0.96
FXN-201ENST00000377270 FBN3Q75N90 2809 aa9.05□□□□□ -0.96
FXN-201ENST00000377270 LINC00304Q8N9R0 145 aa9.04□□□□□ -0.96
FXN-201ENST00000377270 CRIPTQ9P021 101 aa9.04□□□□□ -0.96
FXN-201ENST00000377270 DNAH8Q96JB1 4490 aa9.02□□□□□ -0.97
FXN-201ENST00000377270 IGLV7-43P04211 117 aa9.02□□□□□ -0.97
FXN-201ENST00000377270 CDK2AP2O75956 126 aa9.01□□□□□ -0.97
FXN-201ENST00000377270 ANAPC11Q9NYG5 84 aa9.01□□□□□ -0.97
FXN-201ENST00000377270 FRAS1Q86XX4 4008 aa9□□□□□ -0.97
FXN-201ENST00000377270 WWC2-AS2Q96NR7 200 aa8.99□□□□□ -0.97
FXN-201ENST00000377270 Q5W150 140 aa8.97□□□□□ -0.97
FXN-201ENST00000377270 KRTAP13-3Q3SY46 172 aa8.95□□□□□ -0.98
FXN-201ENST00000377270 SPINT4Q6UDR6 99 aa8.95□□□□□ -0.98
FXN-201ENST00000377270 FLG2Q5D862 2391 aaPredicted RBP8.93□□□□□ -0.98
FXN-201ENST00000377270 DNAH6Q9C0G6 4158 aa8.93□□□□□ -0.98
FXN-201ENST00000377270 KRTAP10-2P60368 255 aa8.92□□□□□ -0.98
FXN-201ENST00000377270 DNAH5Q8TE73 4624 aa8.89□□□□□ -0.99
FXN-201ENST00000377270 SSBP3-AS1Q7Z2R9 100 aa8.89□□□□□ -0.99
FXN-201ENST00000377270 CIRBP-AS1Q8TBR5 109 aa8.89□□□□□ -0.99
FXN-201ENST00000377270 DNAH11Q96DT5 4516 aa8.87□□□□□ -0.99
FXN-201ENST00000377270 H0YAA0 97 aa8.83□□□□□ -1
FXN-201ENST00000377270 LUZP6Q538Z0 58 aa8.82□□□□□ -1
FXN-201ENST00000377270 KRTAP15-1Q3LI76 137 aa8.82□□□□□ -1
FXN-201ENST00000377270 HYDINQ4G0P3 5121 aa8.81□□□□□ -1
FXN-201ENST00000377270 KRTAP10-1P60331 282 aa8.8□□□□□ -1
FXN-201ENST00000377270 SPINK6Q6UWN8 80 aa8.79□□□□□ -1
FXN-201ENST00000377270 PKD1P98161 4303 aa8.78□□□□□ -1
FXN-201ENST00000377270 FAT2Q9NYQ8 4349 aa8.77□□□□□ -1.01
FXN-201ENST00000377270 Q6ZSA8 131 aa8.77□□□□□ -1.01
FXN-201ENST00000377270 LRP1BQ9NZR2 4599 aa8.76□□□□□ -1.01
FXN-201ENST00000377270 FAM229AH3BQW9 127 aa8.73□□□□□ -1.01
FXN-201ENST00000377270 IGKV2-30P06310 120 aa8.72□□□□□ -1.01
FXN-201ENST00000377270 KRTAP13-2Q52LG2 175 aa8.69□□□□□ -1.02
FXN-201ENST00000377270 KRTAP21-3Q3LHN1 58 aa8.68□□□□□ -1.02
FXN-201ENST00000377270 SPINK1P00995 79 aa8.66□□□□□ -1.02
FXN-201ENST00000377270 K7ERS5 55 aa8.65□□□□□ -1.02
FXN-201ENST00000377270 VPS13BQ7Z7G8 4022 aa8.64□□□□□ -1.03
FXN-201ENST00000377270 KRTAP1-4P0C5Y4 121 aa8.62□□□□□ -1.03
FXN-201ENST00000377270 TPRXLQ17RH7 258 aa8.61□□□□□ -1.03
FXN-201ENST00000377270 PKHD1P08F94 4074 aa8.57□□□□□ -1.04
FXN-201ENST00000377270 SACSQ9NZJ4 4579 aa8.57□□□□□ -1.04
FXN-201ENST00000377270 A0A1B0GU33 70 aa8.56□□□□□ -1.04
FXN-201ENST00000377270 SEC61BP60468 96 aaKnown RBP8.55□□□□□ -1.04
FXN-201ENST00000377270 IGKV2D-30A0A075B6S6 120 aa8.55□□□□□ -1.04
FXN-201ENST00000377270 TYMSOSQ8TAI1 123 aa8.53□□□□□ -1.04
FXN-201ENST00000377270 H1FX-AS1Q4G0G2 97 aa8.49□□□□□ -1.05
FXN-201ENST00000377270 C10orf95Q9H7T3 257 aa8.48□□□□□ -1.05
FXN-201ENST00000377270 SMR3BP02814 79 aaPredicted RBP8.47□□□□□ -1.05
FXN-201ENST00000377270 DYNC1H1Q14204 4646 aaKnown RBP8.46□□□□□ -1.05
FXN-201ENST00000377270 A0A1B0GVY2 172 aa8.39□□□□□ -1.07
FXN-201ENST00000377270 Q8N1X5 172 aa8.39□□□□□ -1.07
FXN-201ENST00000377270 FAT1Q14517 4588 aa8.37□□□□□ -1.07
FXN-201ENST00000377270 APOBP04114 4563 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms