RNA–Protein interactions for RNA: ENST00000376887.8

ABCC4-201, Transcript of ATP binding cassette subfamily C member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCC4, Length 5,839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4-201ENST00000376887 TRRAPQ9Y4A5 3859 aa5□□□□□ -1.61
ABCC4-201ENST00000376887 ZNF469Q96JG9 3925 aaPredicted RBP4.99□□□□□ -1.61
ABCC4-201ENST00000376887 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.98□□□□□ -1.61
ABCC4-201ENST00000376887 H1FX-AS1Q4G0G2 97 aa4.97□□□□□ -1.61
ABCC4-201ENST00000376887 R4GN34 69 aa4.97□□□□□ -1.61
ABCC4-201ENST00000376887 SEC61BP60468 96 aaKnown RBP4.96□□□□□ -1.62
ABCC4-201ENST00000376887 A0A1W2PNM2 257 aa4.95□□□□□ -1.62
ABCC4-201ENST00000376887 ANAPC11Q9NYG5 84 aa4.95□□□□□ -1.62
ABCC4-201ENST00000376887 WIPF1O43516 503 aa4.95□□□□□ -1.62
ABCC4-201ENST00000376887 CNBPP62633 177 aaKnown RBP4.94□□□□□ -1.62
ABCC4-201ENST00000376887 KRTAP26-1Q6PEX3 210 aa4.94□□□□□ -1.62
ABCC4-201ENST00000376887 TNP2Q05952 138 aa4.92□□□□□ -1.62
ABCC4-201ENST00000376887 FAM229BQ4G0N7 80 aa4.91□□□□□ -1.62
ABCC4-201ENST00000376887 Q75L30 129 aa4.91□□□□□ -1.62
ABCC4-201ENST00000376887 ZCCHC13Q8WW36 166 aaKnown RBP4.91□□□□□ -1.62
ABCC4-201ENST00000376887 KRTAP1-5Q9BYS1 174 aa4.9□□□□□ -1.63
ABCC4-201ENST00000376887 H3BS24 57 aa4.89□□□□□ -1.63
ABCC4-201ENST00000376887 TGP01266 2768 aa4.88□□□□□ -1.63
ABCC4-201ENST00000376887 ROMO1P60602 79 aa4.86□□□□□ -1.63
ABCC4-201ENST00000376887 AKAP9Q99996 3911 aa4.86□□□□□ -1.63
ABCC4-201ENST00000376887 LINC01558Q9Y6Z2 57 aa4.85□□□□□ -1.63
ABCC4-201ENST00000376887 OXTP01178 125 aa4.85□□□□□ -1.63
ABCC4-201ENST00000376887 RPL37P61927 97 aaKnown RBP4.84□□□□□ -1.63
ABCC4-201ENST00000376887 Q8N9P0 234 aaPredicted RBP4.84□□□□□ -1.63
ABCC4-201ENST00000376887 OCR1Q9BZK8 76 aa4.84□□□□□ -1.64
ABCC4-201ENST00000376887 M0QZ58 72 aa4.83□□□□□ -1.64
ABCC4-201ENST00000376887 SRRM2Q9UQ35 2752 aaKnown RBP4.83□□□□□ -1.64
ABCC4-201ENST00000376887 ANK3Q12955 4377 aaKnown RBP4.83□□□□□ -1.64
ABCC4-201ENST00000376887 SPRR1AP35321 89 aa4.82□□□□□ -1.64
ABCC4-201ENST00000376887 KRTAP7-1Q8IUC3 87 aa4.8□□□□□ -1.64
ABCC4-201ENST00000376887 PANO1I0J062 215 aa4.78□□□□□ -1.64
ABCC4-201ENST00000376887 KRTAP4-16G5E9R7 235 aaPredicted RBP4.78□□□□□ -1.64
ABCC4-201ENST00000376887 Q5VSD8 79 aa4.77□□□□□ -1.65
ABCC4-201ENST00000376887 KRTAP16-1A8MUX0 517 aa4.77□□□□□ -1.65
ABCC4-201ENST00000376887 KRTAP11-1Q8IUC1 163 aa4.77□□□□□ -1.65
ABCC4-201ENST00000376887 PRAC1Q96KF2 57 aa4.76□□□□□ -1.65
ABCC4-201ENST00000376887 Q5XG85 94 aa4.75□□□□□ -1.65
ABCC4-201ENST00000376887 FP248Q71RG6 208 aaPredicted RBP4.75□□□□□ -1.65
ABCC4-201ENST00000376887 Q5W150 140 aa4.74□□□□□ -1.65
ABCC4-201ENST00000376887 C20orf166-AS1Q96NR2 134 aa4.74□□□□□ -1.65
ABCC4-201ENST00000376887 PLAC8Q9NZF1 115 aa4.74□□□□□ -1.65
ABCC4-201ENST00000376887 MMP24-AS1A0A0U1RRL7 71 aa4.73□□□□□ -1.65
ABCC4-201ENST00000376887 DMBT1Q9UGM3 2413 aaPredicted RBP4.73□□□□□ -1.65
ABCC4-201ENST00000376887 COL7A1Q02388 2944 aa4.72□□□□□ -1.65
ABCC4-201ENST00000376887 ASB16-AS1Q495Z4 193 aa4.72□□□□□ -1.65
ABCC4-201ENST00000376887 CSMD3Q7Z407 3707 aa4.71□□□□□ -1.66
ABCC4-201ENST00000376887 ADM2Q7Z4H4 148 aa4.71□□□□□ -1.66
ABCC4-201ENST00000376887 FBN3Q75N90 2809 aa4.68□□□□□ -1.66
ABCC4-201ENST00000376887 LINC00472Q9H8W2 130 aa4.68□□□□□ -1.66
ABCC4-201ENST00000376887 Q5VV11 94 aa4.66□□□□□ -1.66
ABCC4-201ENST00000376887 FLG2Q5D862 2391 aaPredicted RBP4.65□□□□□ -1.67
ABCC4-201ENST00000376887 SPATA8Q6RVD6 105 aa4.64□□□□□ -1.67
ABCC4-201ENST00000376887 SPRR1BP22528 89 aa4.64□□□□□ -1.67
ABCC4-201ENST00000376887 A0A087X002 238 aa4.61□□□□□ -1.67
ABCC4-201ENST00000376887 NOTCH2NLQ7Z3S9 236 aa4.61□□□□□ -1.67
ABCC4-201ENST00000376887 Q6ZRN7 208 aaPredicted RBP4.61□□□□□ -1.67
ABCC4-201ENST00000376887 KRTAP29-1A8MX34 341 aaPredicted RBP4.61□□□□□ -1.67
ABCC4-201ENST00000376887 KRTAP10-2P60368 255 aa4.61□□□□□ -1.67
ABCC4-201ENST00000376887 LCE6AA0A183 80 aa4.59□□□□□ -1.68
ABCC4-201ENST00000376887 TNP1P09430 55 aa4.57□□□□□ -1.68
ABCC4-201ENST00000376887 MEGF8Q7Z7M0 2845 aa4.57□□□□□ -1.68
ABCC4-201ENST00000376887 Q6ZR54 194 aa4.56□□□□□ -1.68
ABCC4-201ENST00000376887 A8MUU9 505 aa4.55□□□□□ -1.68
ABCC4-201ENST00000376887 KRTAP10-1P60331 282 aa4.54□□□□□ -1.68
ABCC4-201ENST00000376887 KRTAP13-1Q8IUC0 172 aa4.54□□□□□ -1.68
ABCC4-201ENST00000376887 KRTAP25-1Q3LHN0 102 aa4.53□□□□□ -1.68
ABCC4-201ENST00000376887 A8MU10 97 aa4.52□□□□□ -1.69
ABCC4-201ENST00000376887 C10orf95Q9H7T3 257 aa4.5□□□□□ -1.69
ABCC4-201ENST00000376887 P0C880 135 aa4.5□□□□□ -1.69
ABCC4-201ENST00000376887 KRTAP21-3Q3LHN1 58 aa4.48□□□□□ -1.69
ABCC4-201ENST00000376887 RPS29P62273 56 aaKnown RBP4.48□□□□□ -1.69
ABCC4-201ENST00000376887 NDUFAF8A1L188 74 aa4.46□□□□□ -1.7
ABCC4-201ENST00000376887 HUWE1Q7Z6Z7 4374 aaKnown RBP4.46□□□□□ -1.7
ABCC4-201ENST00000376887 PP632Q6XCG6 107 aa4.45□□□□□ -1.7
ABCC4-201ENST00000376887 KRTAP13-2Q52LG2 175 aa4.44□□□□□ -1.7
ABCC4-201ENST00000376887 ANK2Q01484 3957 aa4.43□□□□□ -1.7
ABCC4-201ENST00000376887 DNAH10Q8IVF4 4471 aa4.4□□□□□ -1.71
ABCC4-201ENST00000376887 LYSTQ99698 3801 aa4.37□□□□□ -1.71
ABCC4-201ENST00000376887 KRTAP10-8P60410 259 aa4.35□□□□□ -1.71
ABCC4-201ENST00000376887 PRO2289Q9P1D8 64 aa4.35□□□□□ -1.71
ABCC4-201ENST00000376887 CMYA5Q8N3K9 4069 aa4.35□□□□□ -1.71
ABCC4-201ENST00000376887 A6NN06 94 aa4.33□□□□□ -1.72
ABCC4-201ENST00000376887 KRTAP1-4P0C5Y4 121 aa4.31□□□□□ -1.72
ABCC4-201ENST00000376887 PLECQ15149 4684 aaKnown RBP4.27□□□□□ -1.73
ABCC4-201ENST00000376887 DNAH9Q9NYC9 4486 aa4.27□□□□□ -1.73
ABCC4-201ENST00000376887 DNHD1Q96M86 4753 aa4.22□□□□□ -1.73
ABCC4-201ENST00000376887 DNAH7Q8WXX0 4024 aa4.21□□□□□ -1.74
ABCC4-201ENST00000376887 KRTAP13-3Q3SY46 172 aa4.21□□□□□ -1.74
ABCC4-201ENST00000376887 FRAS1Q86XX4 4008 aa4.2□□□□□ -1.74
ABCC4-201ENST00000376887 DNAH1Q9P2D7 4330 aa4.19□□□□□ -1.74
ABCC4-201ENST00000376887 STARD9Q9P2P6 4700 aa4.18□□□□□ -1.74
ABCC4-201ENST00000376887 DNAH11Q96DT5 4516 aa4.18□□□□□ -1.74
ABCC4-201ENST00000376887 KRTAP10-10P60014 251 aa4.18□□□□□ -1.74
ABCC4-201ENST00000376887 PRKDCP78527 4128 aaKnown RBP4.17□□□□□ -1.74
ABCC4-201ENST00000376887 KMT2AQ03164 3969 aa4.17□□□□□ -1.74
ABCC4-201ENST00000376887 DNAH3Q8TD57 4116 aa4.15□□□□□ -1.74
ABCC4-201ENST00000376887 A0A1B0GVY2 172 aa4.15□□□□□ -1.75
ABCC4-201ENST00000376887 VPS13DQ5THJ4 4388 aa4.07□□□□□ -1.76
ABCC4-201ENST00000376887 XP32Q5T750 250 aa4.06□□□□□ -1.76
ABCC4-201ENST00000376887 DNAH8Q96JB1 4490 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms