RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 CD164Q04900 197 aa14.99□□□□□ -0.01
C9orf40-201ENST00000376854 C1orf134Q5TEV5 83 aa14.99□□□□□ -0.01
C9orf40-201ENST00000376854 NOTCH2NLQ7Z3S9 236 aa14.99□□□□□ -0.01
C9orf40-201ENST00000376854 DNAH6Q9C0G6 4158 aa14.98□□□□□ -0.01
C9orf40-201ENST00000376854 COA5Q86WW8 74 aa14.98□□□□□ -0.01
C9orf40-201ENST00000376854 Q8N9P0 234 aaPredicted RBP14.98□□□□□ -0.01
C9orf40-201ENST00000376854 IGLV7-43P04211 117 aa14.97□□□□□ -0.01
C9orf40-201ENST00000376854 LY6G6CO95867 125 aa14.96□□□□□ -0.01
C9orf40-201ENST00000376854 DNAH5Q8TE73 4624 aa14.95□□□□□ -0.02
C9orf40-201ENST00000376854 DNAH11Q96DT5 4516 aa14.93□□□□□ -0.02
C9orf40-201ENST00000376854 C1orf195Q5TG92 126 aa14.93□□□□□ -0.02
C9orf40-201ENST00000376854 LIMD2Q9BT23 127 aa14.93□□□□□ -0.02
C9orf40-201ENST00000376854 Q5VV11 94 aa14.92□□□□□ -0.02
C9orf40-201ENST00000376854 SPINK6Q6UWN8 80 aa14.92□□□□□ -0.02
C9orf40-201ENST00000376854 CIRBP-AS1Q8TBR5 109 aa14.91□□□□□ -0.02
C9orf40-201ENST00000376854 ALMS1Q8TCU4 4167 aa14.87□□□□□ -0.03
C9orf40-201ENST00000376854 PRR15LQ9BU68 103 aa14.84□□□□□ -0.03
C9orf40-201ENST00000376854 KRTAP10-2P60368 255 aa14.81□□□□□ -0.04
C9orf40-201ENST00000376854 CHKB-CPT1BH3BT56 60 aa14.8□□□□□ -0.04
C9orf40-201ENST00000376854 SSBP3-AS1Q7Z2R9 100 aa14.79□□□□□ -0.04
C9orf40-201ENST00000376854 HYDINQ4G0P3 5121 aa14.77□□□□□ -0.04
C9orf40-201ENST00000376854 LOC101927531A0A1B0GV80 90 aa14.77□□□□□ -0.05
C9orf40-201ENST00000376854 Q5W150 140 aa14.77□□□□□ -0.05
C9orf40-201ENST00000376854 PKD1P98161 4303 aa14.74□□□□□ -0.05
C9orf40-201ENST00000376854 HRES1P13985 223 aa14.73□□□□□ -0.05
C9orf40-201ENST00000376854 KRTAP13-3Q3SY46 172 aa14.72□□□□□ -0.05
C9orf40-201ENST00000376854 FAT2Q9NYQ8 4349 aa14.72□□□□□ -0.05
C9orf40-201ENST00000376854 LRP1BQ9NZR2 4599 aa14.71□□□□□ -0.05
C9orf40-201ENST00000376854 A8MU10 97 aa14.7□□□□□ -0.06
C9orf40-201ENST00000376854 C8orf87E5RJ46 101 aa14.7□□□□□ -0.06
C9orf40-201ENST00000376854 Q75L30 129 aa14.7□□□□□ -0.06
C9orf40-201ENST00000376854 SPAG11AQ6PDA7 123 aa14.69□□□□□ -0.06
C9orf40-201ENST00000376854 LINC01558Q9Y6Z2 57 aa14.64□□□□□ -0.07
C9orf40-201ENST00000376854 LINC00313P59037 77 aa14.61□□□□□ -0.07
C9orf40-201ENST00000376854 KRTAP10-1P60331 282 aa14.61□□□□□ -0.07
C9orf40-201ENST00000376854 KRTAP13-2Q52LG2 175 aa14.61□□□□□ -0.07
C9orf40-201ENST00000376854 A6NED7 52 aa14.6□□□□□ -0.07
C9orf40-201ENST00000376854 Q6ZSA8 131 aa14.55□□□□□ -0.08
C9orf40-201ENST00000376854 LCA10Q71F78 164 aa14.54□□□□□ -0.08
C9orf40-201ENST00000376854 FAM229AH3BQW9 127 aa14.52□□□□□ -0.09
C9orf40-201ENST00000376854 PMAIP1Q13794 54 aa14.51□□□□□ -0.09
C9orf40-201ENST00000376854 RETNLBQ9BQ08 111 aa14.49□□□□□ -0.09
C9orf40-201ENST00000376854 ACYP2P14621 99 aa14.49□□□□□ -0.09
C9orf40-201ENST00000376854 PRR26Q8N8Z3 221 aa14.49□□□□□ -0.09
C9orf40-201ENST00000376854 VPS13BQ7Z7G8 4022 aa14.47□□□□□ -0.09
C9orf40-201ENST00000376854 SPTSSBQ8NFR3 76 aa14.44□□□□□ -0.1
C9orf40-201ENST00000376854 KRTAP1-4P0C5Y4 121 aa14.43□□□□□ -0.1
C9orf40-201ENST00000376854 CDC42SE1Q9NRR8 79 aa14.43□□□□□ -0.1
C9orf40-201ENST00000376854 SEC61GP60059 68 aa14.42□□□□□ -0.1
C9orf40-201ENST00000376854 DMAC1Q96GE9 116 aa14.42□□□□□ -0.1
C9orf40-201ENST00000376854 ATP11AUNQ6ZP68 121 aa14.41□□□□□ -0.1
C9orf40-201ENST00000376854 KRTAP16-1A8MUX0 517 aa14.41□□□□□ -0.1
C9orf40-201ENST00000376854 IGKV2-30P06310 120 aa14.41□□□□□ -0.1
C9orf40-201ENST00000376854 SACSQ9NZJ4 4579 aa14.38□□□□□ -0.11
C9orf40-201ENST00000376854 PKHD1P08F94 4074 aa14.38□□□□□ -0.11
C9orf40-201ENST00000376854 SPINK7P58062 85 aa14.37□□□□□ -0.11
C9orf40-201ENST00000376854 PLA2G1BP04054 148 aaKnown RBP14.3□□□□□ -0.12
C9orf40-201ENST00000376854 C4orf48Q5BLP8 95 aa14.3□□□□□ -0.12
C9orf40-201ENST00000376854 TYMSOSQ8TAI1 123 aa14.27□□□□□ -0.13
C9orf40-201ENST00000376854 IGKV2D-30A0A075B6S6 120 aa14.23□□□□□ -0.13
C9orf40-201ENST00000376854 SPINK1P00995 79 aa14.21□□□□□ -0.13
C9orf40-201ENST00000376854 A6NN06 94 aa14.21□□□□□ -0.13
C9orf40-201ENST00000376854 DYNC1H1Q14204 4646 aaKnown RBP14.2□□□□□ -0.14
C9orf40-201ENST00000376854 KTN1-AS1Q86SY8 53 aa14.17□□□□□ -0.14
C9orf40-201ENST00000376854 A0A1B0GU69 56 aa14.12□□□□□ -0.15
C9orf40-201ENST00000376854 C7orf65Q6ZTY9 151 aa14.09□□□□□ -0.15
C9orf40-201ENST00000376854 LINC00304Q8N9R0 145 aa14.06□□□□□ -0.16
C9orf40-201ENST00000376854 FAT1Q14517 4588 aa14.05□□□□□ -0.16
C9orf40-201ENST00000376854 SMR3BP02814 79 aaPredicted RBP14.03□□□□□ -0.16
C9orf40-201ENST00000376854 APOBP04114 4563 aaKnown RBP14.01□□□□□ -0.17
C9orf40-201ENST00000376854 RPS29P62273 56 aaKnown RBP14.01□□□□□ -0.17
C9orf40-201ENST00000376854 RYR2Q92736 4967 aa13.91□□□□□ -0.18
C9orf40-201ENST00000376854 A0A1B0GVY2 172 aa13.9□□□□□ -0.18
C9orf40-201ENST00000376854 SPATA8Q6RVD6 105 aa13.89□□□□□ -0.19
C9orf40-201ENST00000376854 Q8N1X5 172 aa13.89□□□□□ -0.19
C9orf40-201ENST00000376854 UQCR11O14957 56 aa13.86□□□□□ -0.19
C9orf40-201ENST00000376854 MIR22HGQ0VDD5 57 aa13.84□□□□□ -0.19
C9orf40-201ENST00000376854 PKHD1L1Q86WI1 4243 aa13.83□□□□□ -0.19
C9orf40-201ENST00000376854 KMT2CQ8NEZ4 4911 aaKnown RBP13.82□□□□□ -0.2
C9orf40-201ENST00000376854 RBM12B-AS1Q9P1G2 102 aa13.82□□□□□ -0.2
C9orf40-201ENST00000376854 C9orf92A6NGG3 77 aa13.81□□□□□ -0.2
C9orf40-201ENST00000376854 KRTAP10-4P60372 401 aaPredicted RBP13.81□□□□□ -0.2
C9orf40-201ENST00000376854 C20orf166-AS1Q96NR2 134 aa13.75□□□□□ -0.21
C9orf40-201ENST00000376854 A8MUU9 505 aa13.75□□□□□ -0.21
C9orf40-201ENST00000376854 KRTAP3-1Q9BYR8 98 aa13.57□□□□□ -0.24
C9orf40-201ENST00000376854 PRAC1Q96KF2 57 aa13.56□□□□□ -0.24
C9orf40-201ENST00000376854 ADM2Q7Z4H4 148 aa13.54□□□□□ -0.24
C9orf40-201ENST00000376854 LRP1Q07954 4544 aaKnown RBP13.51□□□□□ -0.25
C9orf40-201ENST00000376854 FLG2Q5D862 2391 aaPredicted RBP13.44□□□□□ -0.26
C9orf40-201ENST00000376854 FAT3Q8TDW7 4589 aa13.44□□□□□ -0.26
C9orf40-201ENST00000376854 HSPG2P98160 4391 aa13.44□□□□□ -0.26
C9orf40-201ENST00000376854 TNXBP22105 4242 aa13.43□□□□□ -0.26
C9orf40-201ENST00000376854 RYR3Q15413 4870 aa13.42□□□□□ -0.26
C9orf40-201ENST00000376854 H0YAA0 97 aa13.39□□□□□ -0.27
C9orf40-201ENST00000376854 COX6B2Q6YFQ2 88 aa13.35□□□□□ -0.27
C9orf40-201ENST00000376854 A0A1B0GU33 70 aa13.34□□□□□ -0.27
C9orf40-201ENST00000376854 H1FX-AS1Q4G0G2 97 aa13.29□□□□□ -0.28
C9orf40-201ENST00000376854 RYR1P21817 5038 aa13.28□□□□□ -0.28
C9orf40-201ENST00000376854 Q5VSD8 79 aa13.27□□□□□ -0.29
C9orf40-201ENST00000376854 KRTAP10-8P60410 259 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms